ETH_00042640 | proteasome subunit beta type 7, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00042640OTHER0.9843070.0025660.013127
No Results

  • Fasta :-

    >ETH_00042640 MGSVEQLQRQLGGFDFSNHCRNVSLLLRSAAASSSASSSTGVPSAAAAGSFRMPPLRKTG TTICGVIFQDGVVLGADTRATEGPLVADKNCNKLHKISSNIYAAGAGTAADLDHMCDWLA TQVELHRLNTYAK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00042640.fa Sequence name : ETH_00042640 Sequence length : 133 VALUES OF COMPUTED PARAMETERS Coef20 : 3.284 CoefTot : -0.138 ChDiff : 2 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.229 1.324 0.211 0.552 MesoH : -0.198 0.306 -0.209 0.161 MuHd_075 : 28.530 10.912 7.017 5.052 MuHd_095 : 11.222 13.695 3.482 3.676 MuHd_100 : 15.495 12.983 3.270 3.517 MuHd_105 : 26.447 16.927 6.056 4.719 Hmax_075 : 12.500 8.000 1.755 4.000 Hmax_095 : 0.200 7.200 -1.563 3.230 Hmax_100 : 3.600 6.800 -1.527 2.690 Hmax_105 : 11.100 12.200 0.423 4.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9353 0.0647 DFMC : 0.9463 0.0537
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 133 ETH_00042640 MGSVEQLQRQLGGFDFSNHCRNVSLLLRSAAASSSASSSTGVPSAAAAGSFRMPPLRKTGTTICGVIFQDGVVLGADTRA 80 TEGPLVADKNCNKLHKISSNIYAAGAGTAADLDHMCDWLATQVELHRLNTYAK 160 ................................................................................ 80 ..................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00042640 9 SVEQLQR|QL 0.102 . ETH_00042640 21 DFSNHCR|NV 0.160 . ETH_00042640 28 NVSLLLR|SA 0.138 . ETH_00042640 52 AAAGSFR|MP 0.075 . ETH_00042640 57 FRMPPLR|KT 0.139 . ETH_00042640 58 RMPPLRK|TG 0.076 . ETH_00042640 79 VLGADTR|AT 0.089 . ETH_00042640 89 GPLVADK|NC 0.058 . ETH_00042640 93 ADKNCNK|LH 0.055 . ETH_00042640 96 NCNKLHK|IS 0.075 . ETH_00042640 127 TQVELHR|LN 0.077 . ETH_00042640 133 RLNTYAK|-- 0.077 . ____________________________^_________________

  • Fasta :-

    >ETH_00042640 ATGGGTTCTGTGGAACAGCTGCAACGCCAATTAGGAGGGTTTGACTTCAGCAACCACTGC CGGAATGTATCCTTGCTACTGCGCTCTGCTGCCGCCAGCTCTTCTGCTTCGTCGTCGACC GGCGTTCCTTCCGCTGCAGCAGCAGGGAGCTTTCGCATGCCTCCTCTGCGCAAGACAGGC ACGACCATATGTGGTGTCATATTTCAGGACGGGGTGGTGCTGGGGGCCGACACAAGAGCA ACCGAGGGACCCCTTGTTGCGGATAAGAATTGCAACAAACTCCACAAAATTAGCAGCAAC ATCTACGCCGCTGGTGCAGGCACTGCAGCAGACCTCGACCACATGTGCGACTGGCTCGCC ACCCAGGTCGAGCTACACAGACTCAACACTTACGCAAAG
  • Download Fasta

  • Fasta :-

    MGSVEQLQRQLGGFDFSNHCRNVSLLLRSAAASSSASSSTGVPSAAAAGSFRMPPLRKTG TTICGVIFQDGVVLGADTRATEGPLVADKNCNKLHKISSNIYAAGAGTAADLDHMCDWLA TQVELHRLNTYAK

  • title: active site
  • coordinates: T61,D77,R79,K93
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India