ETH_0005000 | cathepsin C2 (TgCPC2), putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_0005000OTHER0.9820290.0100200.007951
No Results

  • Fasta :-

    >ETH_0005000 MQQCHDLGGQLGAAVYGCGGPPPHLGLPKSCEKKIKVSKWYYVGGPFGASSAAQMQREIW LKGPLAVSIEPPLPSAPNQGDCGSCYAITSSTVLTSRASFSSYRGGVFKEPYTSIRQRGK NWTWEKAMVVVGWGWEREGPLWIPFWKIRNSWGPSWGEKGFGKVLRGLNEIAIERVAVAA EVLLFNGNTLVQP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_0005000.fa Sequence name : ETH_0005000 Sequence length : 193 VALUES OF COMPUTED PARAMETERS Coef20 : 2.628 CoefTot : -4.749 ChDiff : 8 ZoneTo : 57 KR : 6 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.994 1.400 0.182 0.503 MesoH : -0.231 0.042 -0.269 0.200 MuHd_075 : 26.794 18.042 10.686 6.045 MuHd_095 : 25.999 19.761 9.258 5.173 MuHd_100 : 26.399 23.908 10.204 4.914 MuHd_105 : 30.148 23.923 10.822 5.070 Hmax_075 : 10.850 6.533 3.488 2.840 Hmax_095 : 5.687 18.200 0.550 3.141 Hmax_100 : 16.600 18.300 6.006 5.000 Hmax_105 : 4.783 17.588 2.058 2.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9977 0.0023 DFMC : 0.9975 0.0025
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 193 ETH_0005000 MQQCHDLGGQLGAAVYGCGGPPPHLGLPKSCEKKIKVSKWYYVGGPFGASSAAQMQREIWLKGPLAVSIEPPLPSAPNQG 80 DCGSCYAITSSTVLTSRASFSSYRGGVFKEPYTSIRQRGKNWTWEKAMVVVGWGWEREGPLWIPFWKIRNSWGPSWGEKG 160 FGKVLRGLNEIAIERVAVAAEVLLFNGNTLVQP 240 ................................................................................ 80 ................................................................................ 160 ................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_0005000 29 PHLGLPK|SC 0.097 . ETH_0005000 33 LPKSCEK|KI 0.061 . ETH_0005000 34 PKSCEKK|IK 0.099 . ETH_0005000 36 SCEKKIK|VS 0.071 . ETH_0005000 39 KKIKVSK|WY 0.079 . ETH_0005000 57 SAAQMQR|EI 0.116 . ETH_0005000 62 QREIWLK|GP 0.063 . ETH_0005000 97 STVLTSR|AS 0.085 . ETH_0005000 104 ASFSSYR|GG 0.092 . ETH_0005000 109 YRGGVFK|EP 0.078 . ETH_0005000 116 EPYTSIR|QR 0.118 . ETH_0005000 118 YTSIRQR|GK 0.106 . ETH_0005000 120 SIRQRGK|NW 0.076 . ETH_0005000 126 KNWTWEK|AM 0.066 . ETH_0005000 137 VGWGWER|EG 0.067 . ETH_0005000 147 LWIPFWK|IR 0.065 . ETH_0005000 149 IPFWKIR|NS 0.093 . ETH_0005000 159 GPSWGEK|GF 0.127 . ETH_0005000 163 GEKGFGK|VL 0.065 . ETH_0005000 166 GFGKVLR|GL 0.121 . ETH_0005000 175 NEIAIER|VA 0.088 . ____________________________^_________________

  • Fasta :-

    >ETH_0005000 CTGCAGCAGTGCCACGACCTGGGTGGCCAGCTGGGCGCTGCAGTGTATGGCTGTGGGGGG CCCCCCCCGCACTTGGGGCTTCCGAAGTCTTGTGAAAAAAAAATAAAAGTTTCCAAATGG TATTATGTTGGGGGCCCCTTCGGGGCCTCTTCTGCTGCTCAGATGCAGCGCGAAATTTGG CTCAAAGGGCCCCTCGCGGTCTCCATTGAGCCCCCCCTTCCCTCGGCTCCAAATCAGGGC GACTGCGGCTCTTGTTATGCCATAACAAGCAGCACTGTTTTGACTTCAAGAGCTTCTTTC TCTTCTTATCGCGGGGGAGTCTTCAAAGAGCCCTACACCAGCATTCGGCAAAGGGGCAAA AACTGGACTTGGGAAAAAGCAATGGTGGTGGTGGGGTGGGGTTGGGAGCGGGAGGGGCCC CTGTGGATACCCTTTTGGAAAATTCGAAACTCATGGGGCCCCTCTTGGGGAGAAAAGGGT TTTGGAAAAGTCTTGAGGGGCCTCAACGAAATAGCAATTGAAAGAGTTGCTGTTGCTGCT GAAGTCCTGCTCTTCAACGGCAACACCCTCGTCCAGCC
  • Download Fasta

  • Fasta :-

    MQQCHDLGGQLGAAVYGCGGPPPHLGLPKSCEKKIKVSKWYYVGGPFGASSAAQMQREIW LKGPLAVSIEPPLPSAPNQGDCGSCYAITSSTVLTSRASFSSYRGGVFKEPYTSIRQRGK NWTWEKAMVVVGWGWEREGPLWIPFWKIRNSWGPSWGEKGFGKVLRGLNEIAIERVAVAA EVLLFNGNTLVQP

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India