LdBPK_040430.1 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_040430.1OTHER0.9999920.0000080.000000
No Results

  • Fasta :-

    >LdBPK_040430.1 MSYPPTEADVISNDSLFSDSVEFDAAEKPIAAEDVHGFAEAKEQPLGHDDRGLPTDDAVM HAGSRYPEEEPAGPPPPVTNAFMKPRKTATKPPREWVPVNLQVPEEDQEDEFDIGTAQKP VYESPETPAATGGAAAPKVRFVNGEPDIRGEVTNCFEEPGLLYRIVDRPNKTWAFYNDSR SFEVHVVCTFGKHSKITPLENTKMTRDESTGEYVMELTVYPGETEPFIKGFVNGFSSKLS ALPLSQEYFQARSEAQNQQVVQVEMDAIRAIAGDETDAERILQICLENGLPFVDLSFPPV QSSIESGAAKPFKRLPWGRPRMYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAVTT QAEDPTVVMQMFRHPKGADSARCERAIGAYRVSFNKNGLWRSILVDDYFPVIAGAPAFAH SRDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDMTGFPAMRIDEMVAKAAVHNGRD LESQMIQWQRKGYQAILTTPGKAPAIPADAQSSPDFSDQPEMEEAFAGTGFLPGHAYSVL DVKEFQKGQIRLICLRNPWVHGSGWTRAWAWDALEWQQHRDIATACGFSKHKGDTSIVWM TFEDALKYFIGGGVLFRAPAAHDARVPITFADCKPGAVFQVSVKAPMDVTFILSNMDHRG MHVDEAGAAESDPNNIDYPPVMLSLAAPVPKETDVYQVVQNSSTDMTQPSDNAWLFLQAR EIAMTCHLEPSAAPYLLIPRLMEGDETVGNGNGGGEDMRDFVHPIYYVNDYVHLFRNAPS VKAKEIAVTIGFEADEEIGDNIVVVMCKIGEGNAVFENFPKFPTDDVEPHEEELYFQTKE SNCGYAQEKAGTAIY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_040430.1.fa Sequence name : LdBPK_040430 Sequence length : 855 VALUES OF COMPUTED PARAMETERS Coef20 : 3.483 CoefTot : -0.551 ChDiff : -51 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.841 1.306 0.025 0.598 MesoH : -0.365 0.413 -0.333 0.249 MuHd_075 : 24.994 17.539 6.304 4.229 MuHd_095 : 12.161 5.289 3.076 1.597 MuHd_100 : 13.038 3.920 3.066 1.026 MuHd_105 : 11.541 3.887 2.808 1.570 Hmax_075 : 12.483 8.750 1.371 3.535 Hmax_095 : 11.900 8.800 1.308 3.520 Hmax_100 : 9.700 4.200 0.566 2.540 Hmax_105 : 5.600 6.183 -0.800 3.302 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9742 0.0258 DFMC : 0.9568 0.0432
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 855 LdBPK_040430.1 MSYPPTEADVISNDSLFSDSVEFDAAEKPIAAEDVHGFAEAKEQPLGHDDRGLPTDDAVMHAGSRYPEEEPAGPPPPVTN 80 AFMKPRKTATKPPREWVPVNLQVPEEDQEDEFDIGTAQKPVYESPETPAATGGAAAPKVRFVNGEPDIRGEVTNCFEEPG 160 LLYRIVDRPNKTWAFYNDSRSFEVHVVCTFGKHSKITPLENTKMTRDESTGEYVMELTVYPGETEPFIKGFVNGFSSKLS 240 ALPLSQEYFQARSEAQNQQVVQVEMDAIRAIAGDETDAERILQICLENGLPFVDLSFPPVQSSIESGAAKPFKRLPWGRP 320 RMYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAVTTQAEDPTVVMQMFRHPKGADSARCERAIGAYRVSFNKNGLW 400 RSILVDDYFPVIAGAPAFAHSRDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDMTGFPAMRIDEMVAKAAVHNGRD 480 LESQMIQWQRKGYQAILTTPGKAPAIPADAQSSPDFSDQPEMEEAFAGTGFLPGHAYSVLDVKEFQKGQIRLICLRNPWV 560 HGSGWTRAWAWDALEWQQHRDIATACGFSKHKGDTSIVWMTFEDALKYFIGGGVLFRAPAAHDARVPITFADCKPGAVFQ 640 VSVKAPMDVTFILSNMDHRGMHVDEAGAAESDPNNIDYPPVMLSLAAPVPKETDVYQVVQNSSTDMTQPSDNAWLFLQAR 720 EIAMTCHLEPSAAPYLLIPRLMEGDETVGNGNGGGEDMRDFVHPIYYVNDYVHLFRNAPSVKAKEIAVTIGFEADEEIGD 800 NIVVVMCKIGEGNAVFENFPKFPTDDVEPHEEELYFQTKESNCGYAQEKAGTAIY 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ....................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_040430.1 28 EFDAAEK|PI 0.060 . LdBPK_040430.1 42 HGFAEAK|EQ 0.059 . LdBPK_040430.1 51 PLGHDDR|GL 0.096 . LdBPK_040430.1 65 VMHAGSR|YP 0.088 . LdBPK_040430.1 84 VTNAFMK|PR 0.071 . LdBPK_040430.1 86 NAFMKPR|KT 0.118 . LdBPK_040430.1 87 AFMKPRK|TA 0.094 . LdBPK_040430.1 91 PRKTATK|PP 0.065 . LdBPK_040430.1 94 TATKPPR|EW 0.122 . LdBPK_040430.1 119 DIGTAQK|PV 0.082 . LdBPK_040430.1 138 GGAAAPK|VR 0.063 . LdBPK_040430.1 140 AAAPKVR|FV 0.195 . LdBPK_040430.1 149 NGEPDIR|GE 0.067 . LdBPK_040430.1 164 EPGLLYR|IV 0.121 . LdBPK_040430.1 168 LYRIVDR|PN 0.083 . LdBPK_040430.1 171 IVDRPNK|TW 0.097 . LdBPK_040430.1 180 AFYNDSR|SF 0.122 . LdBPK_040430.1 192 VVCTFGK|HS 0.060 . LdBPK_040430.1 195 TFGKHSK|IT 0.065 . LdBPK_040430.1 203 TPLENTK|MT 0.068 . LdBPK_040430.1 206 ENTKMTR|DE 0.149 . LdBPK_040430.1 229 ETEPFIK|GF 0.070 . LdBPK_040430.1 238 VNGFSSK|LS 0.060 . LdBPK_040430.1 252 QEYFQAR|SE 0.163 . LdBPK_040430.1 269 VEMDAIR|AI 0.097 . LdBPK_040430.1 280 DETDAER|IL 0.077 . LdBPK_040430.1 310 IESGAAK|PF 0.070 . LdBPK_040430.1 313 GAAKPFK|RL 0.081 . LdBPK_040430.1 314 AAKPFKR|LP 0.166 . LdBPK_040430.1 319 KRLPWGR|PR 0.100 . LdBPK_040430.1 321 LPWGRPR|MY 0.101 . LdBPK_040430.1 325 RPRMYVK|PE 0.064 . LdBPK_040430.1 333 ELHDQIR|LF 0.079 . LdBPK_040430.1 336 DQIRLFR|NR 0.147 . LdBPK_040430.1 338 IRLFRNR|IC 0.098 . LdBPK_040430.1 373 VVMQMFR|HP 0.081 . LdBPK_040430.1 376 QMFRHPK|GA 0.249 . LdBPK_040430.1 382 KGADSAR|CE 0.130 . LdBPK_040430.1 385 DSARCER|AI 0.444 . LdBPK_040430.1 391 RAIGAYR|VS 0.077 . LdBPK_040430.1 396 YRVSFNK|NG 0.053 . LdBPK_040430.1 401 NKNGLWR|SI 0.120 . LdBPK_040430.1 422 PAFAHSR|DL 0.111 . LdBPK_040430.1 434 WPAVLEK|AF 0.081 . LdBPK_040430.1 438 LEKAFAK|MH 0.078 . LdBPK_040430.1 465 TGFPAMR|ID 0.092 . LdBPK_040430.1 472 IDEMVAK|AA 0.082 . LdBPK_040430.1 479 AAVHNGR|DL 0.155 . LdBPK_040430.1 490 QMIQWQR|KG 0.097 . LdBPK_040430.1 491 MIQWQRK|GY 0.148 . LdBPK_040430.1 502 ILTTPGK|AP 0.057 . LdBPK_040430.1 543 YSVLDVK|EF 0.062 . LdBPK_040430.1 547 DVKEFQK|GQ 0.060 . LdBPK_040430.1 551 FQKGQIR|LI 0.079 . LdBPK_040430.1 556 IRLICLR|NP 0.082 . LdBPK_040430.1 567 HGSGWTR|AW 0.094 . LdBPK_040430.1 580 LEWQQHR|DI 0.117 . LdBPK_040430.1 590 TACGFSK|HK 0.074 . LdBPK_040430.1 592 CGFSKHK|GD 0.069 . LdBPK_040430.1 607 TFEDALK|YF 0.068 . LdBPK_040430.1 617 GGGVLFR|AP 0.082 . LdBPK_040430.1 625 PAAHDAR|VP 0.084 . LdBPK_040430.1 634 ITFADCK|PG 0.059 . LdBPK_040430.1 644 VFQVSVK|AP 0.065 . LdBPK_040430.1 659 LSNMDHR|GM 0.115 . LdBPK_040430.1 691 LAAPVPK|ET 0.083 . LdBPK_040430.1 720 WLFLQAR|EI 0.087 . LdBPK_040430.1 740 PYLLIPR|LM 0.073 . LdBPK_040430.1 759 GGGEDMR|DF 0.092 . LdBPK_040430.1 776 DYVHLFR|NA 0.081 . LdBPK_040430.1 782 RNAPSVK|AK 0.080 . LdBPK_040430.1 784 APSVKAK|EI 0.108 . LdBPK_040430.1 808 IVVVMCK|IG 0.062 . LdBPK_040430.1 821 VFENFPK|FP 0.065 . LdBPK_040430.1 839 ELYFQTK|ES 0.070 . LdBPK_040430.1 849 CGYAQEK|AG 0.065 . ____________________________^_________________

  • Fasta :-

    >LdBPK_040430.1 ATGTCGTACCCACCGACGGAGGCGGATGTGATCAGCAACGACAGCCTCTTCTCCGACTCT GTCGAGTTCGACGCAGCGGAGAAGCCGATCGCTGCCGAGGATGTTCACGGCTTTGCTGAA GCGAAAGAGCAGCCTCTTGGGCACGACGACCGCGGCCTGCCCACAGATGATGCCGTGATG CACGCCGGTTCGCGGTACCCTGAGGAAGAGCCGGCCGGGCCGCCGCCGCCGGTAACGAAT GCCTTCATGAAGCCACGCAAGACAGCGACGAAGCCGCCACGGGAGTGGGTGCCAGTGAAC CTGCAGGTGCCCGAGGAAGACCAGGAGGACGAGTTCGACATTGGCACCGCTCAGAAGCCC GTGTACGAGAGCCCGGAAACCCCTGCGGCTACCGGTGGTGCTGCTGCGCCAAAGGTACGG TTCGTGAACGGCGAGCCCGACATCAGGGGCGAGGTGACGAACTGCTTCGAGGAGCCCGGG TTGCTCTACCGCATCGTTGACCGACCGAACAAGACGTGGGCCTTCTACAACGACAGCCGT TCCTTCGAAGTCCACGTTGTGTGCACGTTTGGCAAGCACAGCAAGATCACGCCGCTCGAA AACACGAAGATGACGCGTGATGAAAGCACGGGCGAGTACGTGATGGAGTTGACCGTCTAC CCTGGCGAGACGGAGCCCTTCATCAAGGGCTTCGTGAACGGCTTCTCGAGCAAGCTGAGC GCGCTGCCGCTGTCGCAGGAGTACTTCCAAGCTCGCAGCGAGGCACAGAATCAGCAGGTT GTGCAGGTGGAGATGGACGCCATCCGCGCCATCGCCGGCGACGAGACGGATGCGGAGCGC ATTCTGCAGATCTGCCTGGAGAACGGCCTACCCTTTGTCGACCTCTCCTTCCCGCCTGTG CAGTCGTCCATCGAGTCTGGGGCGGCGAAGCCGTTCAAGCGGCTGCCGTGGGGCCGGCCA CGCATGTACGTGAAGCCGGAGCTGCACGACCAAATTCGACTCTTCCGCAACCGCATCTGC CCCGGCGAGGTCGAGCAGGGCGAGCTGGGTGACTGCTGGCTCATGTGCGCGGTAACCACG CAAGCCGAGGACCCGACAGTGGTCATGCAGATGTTCCGGCACCCGAAGGGCGCCGATTCG GCGCGGTGCGAGCGCGCTATCGGTGCGTACCGCGTGTCCTTCAACAAGAACGGTCTCTGG CGCAGTATCCTTGTGGACGACTACTTTCCTGTCATCGCCGGCGCGCCGGCCTTCGCTCAC AGCCGCGACCTGTGCGAGCTGTGGCCGGCAGTTCTCGAGAAGGCGTTTGCCAAGATGCAC GGCAGCTACGCTATGATCCAGTCCGGTGATCCGATGCACGCACTGACAGACATGACGGGA TTCCCGGCCATGCGCATCGACGAAATGGTCGCCAAGGCGGCCGTGCACAACGGCCGCGAC CTGGAGTCGCAGATGATCCAGTGGCAAAGGAAGGGCTACCAGGCCATCCTCACGACGCCC GGCAAGGCGCCGGCGATTCCGGCGGATGCGCAGAGCTCGCCGGACTTCTCCGACCAGCCC GAGATGGAGGAGGCGTTCGCCGGTACCGGCTTCCTGCCCGGCCACGCCTACTCCGTGCTG GACGTGAAGGAGTTCCAAAAGGGTCAGATCCGCCTGATATGCCTGCGCAACCCGTGGGTG CACGGCAGCGGATGGACGAGGGCGTGGGCGTGGGATGCCCTGGAGTGGCAACAGCACCGC GATATCGCCACCGCGTGCGGCTTCAGCAAGCACAAGGGCGACACTAGCATCGTCTGGATG ACCTTCGAGGATGCGCTCAAGTATTTCATCGGCGGTGGTGTACTTTTCCGCGCGCCGGCA GCGCACGACGCGCGCGTGCCCATTACCTTCGCCGACTGCAAGCCCGGCGCCGTCTTTCAG GTGTCGGTGAAGGCGCCGATGGACGTCACGTTCATCTTGTCGAACATGGACCACCGCGGC ATGCACGTCGACGAGGCAGGTGCGGCCGAGTCCGACCCGAACAACATAGACTACCCACCC GTGATGCTGTCGCTTGCCGCGCCGGTGCCCAAAGAGACGGACGTGTACCAGGTCGTGCAG AACTCCTCGACTGACATGACGCAGCCGTCGGACAACGCGTGGCTGTTCCTGCAGGCGCGC GAGATTGCCATGACGTGCCACCTGGAGCCGAGTGCCGCGCCGTACCTGCTCATTCCGCGC CTCATGGAGGGCGACGAGACAGTCGGCAACGGCAACGGCGGAGGCGAGGACATGCGCGAT TTTGTGCATCCGATCTACTACGTCAACGACTACGTCCACCTCTTCCGGAACGCGCCAAGC GTGAAAGCGAAGGAGATTGCCGTGACCATCGGTTTCGAGGCGGATGAGGAGATCGGTGAT AACATCGTCGTGGTCATGTGCAAGATAGGCGAGGGCAACGCCGTCTTTGAGAACTTTCCG AAGTTCCCGACGGACGACGTGGAGCCGCACGAGGAGGAGCTGTACTTCCAGACCAAGGAG AGCAACTGCGGCTATGCGCAGGAGAAGGCCGGCACGGCCATCTACTGA
  • Download Fasta

  • Fasta :-

    MSYPPTEADVISNDSLFSDSVEFDAAEKPIAAEDVHGFAEAKEQPLGHDDRGLPTDDAVM HAGSRYPEEEPAGPPPPVTNAFMKPRKTATKPPREWVPVNLQVPEEDQEDEFDIGTAQKP VYESPETPAATGGAAAPKVRFVNGEPDIRGEVTNCFEEPGLLYRIVDRPNKTWAFYNDSR SFEVHVVCTFGKHSKITPLENTKMTRDESTGEYVMELTVYPGETEPFIKGFVNGFSSKLS ALPLSQEYFQARSEAQNQQVVQVEMDAIRAIAGDETDAERILQICLENGLPFVDLSFPPV QSSIESGAAKPFKRLPWGRPRMYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAVTT QAEDPTVVMQMFRHPKGADSARCERAIGAYRVSFNKNGLWRSILVDDYFPVIAGAPAFAH SRDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDMTGFPAMRIDEMVAKAAVHNGRD LESQMIQWQRKGYQAILTTPGKAPAIPADAQSSPDFSDQPEMEEAFAGTGFLPGHAYSVL DVKEFQKGQIRLICLRNPWVHGSGWTRAWAWDALEWQQHRDIATACGFSKHKGDTSIVWM TFEDALKYFIGGGVLFRAPAAHDARVPITFADCKPGAVFQVSVKAPMDVTFILSNMDHRG MHVDEAGAAESDPNNIDYPPVMLSLAAPVPKETDVYQVVQNSSTDMTQPSDNAWLFLQAR EIAMTCHLEPSAAPYLLIPRLMEGDETVGNGNGGGEDMRDFVHPIYYVNDYVHLFRNAPS VKAKEIAVTIGFEADEEIGDNIVVVMCKIGEGNAVFENFPKFPTDDVEPHEEELYFQTKE SNCGYAQEKAGTAIY

  • title: catalytic site
  • coordinates: C352,H535,N557
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_040430.1380 SKGADSARCE0.992unspLdBPK_040430.1380 SKGADSARCE0.992unspLdBPK_040430.1380 SKGADSARCE0.992unspLdBPK_040430.1124 SPVYESPETP0.99unspLdBPK_040430.1209 STRDESTGEY0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India