LdBPK_060340.1 | oligopeptidase B-like protein

_IDPredictionOTHERSPmTPCS_Position
LdBPK_060340.1OTHER0.5916220.0012760.407103
No Results

  • Fasta :-

    >LdBPK_060340.1 MAALFPWVPTSNLGYSLSRRVVNKWCPQLRSSYPLPMLDGPFPTEKPEGLELHGETQKPD PFRYMEDLFDRNTQEYTKKEMQHFSLISSKFDFRHSKGRLWAELDAKVVVSSREGGYDKG EERIGDYVYFTRVVPGHDSNAIGFYRKRFGEVDLLAEELINPLFLQQHFGYKDCSIGICR VSEDGRYLAYTLSVEGGDRYLCHIRSVDNATLFHVIRGTNIVSIEFGSGNQFFYTESNEL NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNCNALVVPA SFPVIPTPLKSFFKEGKPLEIAGKSGWNWLDHYNGSFVMVTSDKGPNYRVVYIRDEVALA YGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHFAFERIQHIRVIKCDGGLDAAAQTP RSEDVVLHFPPLSTVTPGLNKNFRQKAMSFVYSSLIQPPRDCVFNFDSDITPSQARLCAS EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNT PKHCLIYVYGSYGEVPSMHFQLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIK SIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMNMRGCGLFGNVLMRSPFLDII NTMIDPDLPLSLAEREDWGDPLNNKRDLDLLKQYDPYYNLNDRVTYPGMMISACLDDDRV PAWNALKYVAKLRQQRTRKDVDPVARPLVLRMRPSGGHYFWGDTENICEELAFLCSQLDL EGPGKMLNDMDVMTHMHNLTATGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNF RTVKARKEPFFWVPTDSELDQKKVDEIFRAKERDARESVRSGAKLGSFGKATGRNLYREE QRGKP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_060340.1.fa Sequence name : LdBPK_060340 Sequence length : 905 VALUES OF COMPUTED PARAMETERS Coef20 : 4.412 CoefTot : -0.386 ChDiff : -16 ZoneTo : 38 KR : 4 DE : 0 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.806 1.794 0.388 0.639 MesoH : -0.051 0.646 -0.177 0.300 MuHd_075 : 38.067 25.276 11.543 8.730 MuHd_095 : 41.813 28.037 11.971 9.962 MuHd_100 : 37.555 21.042 8.586 9.319 MuHd_105 : 37.506 21.164 8.909 8.396 Hmax_075 : 11.000 19.483 3.851 3.560 Hmax_095 : 14.963 15.487 3.202 5.784 Hmax_100 : 10.400 8.400 1.651 4.670 Hmax_105 : -1.800 10.800 2.560 4.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0504 0.9496 DFMC : 0.0599 0.9401 This protein is probably imported in mitochondria. f(Ser) = 0.1316 f(Arg) = 0.0789 CMi = 0.72886 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 905 LdBPK_060340.1 MAALFPWVPTSNLGYSLSRRVVNKWCPQLRSSYPLPMLDGPFPTEKPEGLELHGETQKPDPFRYMEDLFDRNTQEYTKKE 80 MQHFSLISSKFDFRHSKGRLWAELDAKVVVSSREGGYDKGEERIGDYVYFTRVVPGHDSNAIGFYRKRFGEVDLLAEELI 160 NPLFLQQHFGYKDCSIGICRVSEDGRYLAYTLSVEGGDRYLCHIRSVDNATLFHVIRGTNIVSIEFGSGNQFFYTESNEL 240 NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNCNALVVPASFPVIPTPLKSFFKEGKPLE 320 IAGKSGWNWLDHYNGSFVMVTSDKGPNYRVVYIRDEVALAYGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHFAFER 400 IQHIRVIKCDGGLDAAAQTPRSEDVVLHFPPLSTVTPGLNKNFRQKAMSFVYSSLIQPPRDCVFNFDSDITPSQARLCAS 480 EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNTPKHCLIYVYGSYGEVPSMHF 560 QLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIKSIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMN 640 MRGCGLFGNVLMRSPFLDIINTMIDPDLPLSLAEREDWGDPLNNKRDLDLLKQYDPYYNLNDRVTYPGMMISACLDDDRV 720 PAWNALKYVAKLRQQRTRKDVDPVARPLVLRMRPSGGHYFWGDTENICEELAFLCSQLDLEGPGKMLNDMDVMTHMHNLT 800 ATGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNFRTVKARKEPFFWVPTDSELDQKKVDEIFRAKERDARESVR 880 SGAKLGSFGKATGRNLYREEQRGKP 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ..................P............................................................. 800 ................................................................................ 880 ......................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_060340.1 19 LGYSLSR|RV 0.080 . LdBPK_060340.1 20 GYSLSRR|VV 0.279 . LdBPK_060340.1 24 SRRVVNK|WC 0.094 . LdBPK_060340.1 30 KWCPQLR|SS 0.130 . LdBPK_060340.1 46 GPFPTEK|PE 0.077 . LdBPK_060340.1 58 LHGETQK|PD 0.055 . LdBPK_060340.1 63 QKPDPFR|YM 0.131 . LdBPK_060340.1 71 MEDLFDR|NT 0.083 . LdBPK_060340.1 78 NTQEYTK|KE 0.059 . LdBPK_060340.1 79 TQEYTKK|EM 0.085 . LdBPK_060340.1 90 FSLISSK|FD 0.066 . LdBPK_060340.1 94 SSKFDFR|HS 0.094 . LdBPK_060340.1 97 FDFRHSK|GR 0.138 . LdBPK_060340.1 99 FRHSKGR|LW 0.106 . LdBPK_060340.1 107 WAELDAK|VV 0.069 . LdBPK_060340.1 113 KVVVSSR|EG 0.082 . LdBPK_060340.1 119 REGGYDK|GE 0.072 . LdBPK_060340.1 123 YDKGEER|IG 0.083 . LdBPK_060340.1 132 DYVYFTR|VV 0.092 . LdBPK_060340.1 146 NAIGFYR|KR 0.088 . LdBPK_060340.1 147 AIGFYRK|RF 0.086 . LdBPK_060340.1 148 IGFYRKR|FG 0.173 . LdBPK_060340.1 172 QQHFGYK|DC 0.086 . LdBPK_060340.1 180 CSIGICR|VS 0.095 . LdBPK_060340.1 186 RVSEDGR|YL 0.117 . LdBPK_060340.1 199 SVEGGDR|YL 0.089 . LdBPK_060340.1 205 RYLCHIR|SV 0.188 . LdBPK_060340.1 217 TLFHVIR|GT 0.110 . LdBPK_060340.1 242 ESNELNR|PH 0.085 . LdBPK_060340.1 245 ELNRPHR|VM 0.317 . LdBPK_060340.1 252 VMMQEIR|PG 0.079 . LdBPK_060340.1 264 PPVEIYR|DD 0.115 . LdBPK_060340.1 275 QFFVDVR|KT 0.072 . LdBPK_060340.1 276 FFVDVRK|TK 0.088 . LdBPK_060340.1 278 VDVRKTK|DN 0.180 . LdBPK_060340.1 281 RKTKDNK|YV 0.076 . LdBPK_060340.1 290 TITSDSK|VN 0.058 . LdBPK_060340.1 310 VIPTPLK|SF 0.071 . LdBPK_060340.1 314 PLKSFFK|EG 0.065 . LdBPK_060340.1 317 SFFKEGK|PL 0.085 . LdBPK_060340.1 324 PLEIAGK|SG 0.083 . LdBPK_060340.1 344 VMVTSDK|GP 0.058 . LdBPK_060340.1 349 DKGPNYR|VV 0.099 . LdBPK_060340.1 354 YRVVYIR|DE 0.102 . LdBPK_060340.1 363 VALAYGK|EA 0.065 . LdBPK_060340.1 368 GKEAEWK|EL 0.073 . LdBPK_060340.1 374 KELVPHR|DN 0.116 . LdBPK_060340.1 388 VDLFHGR|II 0.082 . LdBPK_060340.1 400 SHFAFER|IQ 0.079 . LdBPK_060340.1 405 ERIQHIR|VI 0.100 . LdBPK_060340.1 408 QHIRVIK|CD 0.146 . LdBPK_060340.1 421 AAAQTPR|SE 0.175 . LdBPK_060340.1 441 VTPGLNK|NF 0.058 . LdBPK_060340.1 444 GLNKNFR|QK 0.113 . LdBPK_060340.1 446 NKNFRQK|AM 0.081 . LdBPK_060340.1 460 SLIQPPR|DC 0.104 . LdBPK_060340.1 476 ITPSQAR|LC 0.071 . LdBPK_060340.1 487 EALFTQR|QS 0.096 . LdBPK_060340.1 505 WPYSIYR|DV 0.226 . LdBPK_060340.1 523 PITICQR|RD 0.071 . LdBPK_060340.1 524 ITICQRR|DA 0.398 . LdBPK_060340.1 542 AQPNTPK|HC 0.060 . LdBPK_060340.1 570 PYMWMLR|RR 0.071 . LdBPK_060340.1 571 YMWMLRR|RW 0.139 . LdBPK_060340.1 572 MWMLRRR|WT 0.171 . LdBPK_060340.1 581 VAFAHVR|GG 0.103 . LdBPK_060340.1 594 NWAQLGK|GE 0.067 . LdBPK_060340.1 598 LGKGENK|IK 0.066 . LdBPK_060340.1 600 KGENKIK|SI 0.103 . LdBPK_060340.1 619 VDMGYTK|PE 0.058 . LdBPK_060340.1 642 AAAMNMR|GC 0.115 . LdBPK_060340.1 653 FGNVLMR|SP 0.106 . LdBPK_060340.1 675 PLSLAER|ED 0.076 . LdBPK_060340.1 685 GDPLNNK|RD 0.057 . LdBPK_060340.1 686 DPLNNKR|DL 0.166 . LdBPK_060340.1 692 RDLDLLK|QY 0.064 . LdBPK_060340.1 703 YYNLNDR|VT 0.093 . LdBPK_060340.1 719 ACLDDDR|VP 0.062 . LdBPK_060340.1 727 PAWNALK|YV 0.076 . LdBPK_060340.1 731 ALKYVAK|LR 0.065 . LdBPK_060340.1 733 KYVAKLR|QQ 0.083 . LdBPK_060340.1 736 AKLRQQR|TR 0.203 . LdBPK_060340.1 738 LRQQRTR|KD 0.101 . LdBPK_060340.1 739 RQQRTRK|DV 0.629 *ProP* LdBPK_060340.1 746 DVDPVAR|PL 0.075 . LdBPK_060340.1 751 ARPLVLR|MR 0.098 . LdBPK_060340.1 753 PLVLRMR|PS 0.105 . LdBPK_060340.1 785 DLEGPGK|ML 0.071 . LdBPK_060340.1 812 DHDDQQK|VF 0.058 . LdBPK_060340.1 816 QQKVFLK|WD 0.066 . LdBPK_060340.1 822 KWDNWER|ER 0.073 . LdBPK_060340.1 824 DNWERER|ID 0.076 . LdBPK_060340.1 830 RIDYHVK|LN 0.059 . LdBPK_060340.1 841 NWEPNFR|TV 0.094 . LdBPK_060340.1 844 PNFRTVK|AR 0.106 . LdBPK_060340.1 846 FRTVKAR|KE 0.087 . LdBPK_060340.1 847 RTVKARK|EP 0.079 . LdBPK_060340.1 862 DSELDQK|KV 0.082 . LdBPK_060340.1 863 SELDQKK|VD 0.088 . LdBPK_060340.1 869 KVDEIFR|AK 0.079 . LdBPK_060340.1 871 DEIFRAK|ER 0.063 . LdBPK_060340.1 873 IFRAKER|DA 0.167 . LdBPK_060340.1 876 AKERDAR|ES 0.233 . LdBPK_060340.1 880 DARESVR|SG 0.121 . LdBPK_060340.1 884 SVRSGAK|LG 0.064 . LdBPK_060340.1 890 KLGSFGK|AT 0.080 . LdBPK_060340.1 894 FGKATGR|NL 0.088 . LdBPK_060340.1 898 TGRNLYR|EE 0.097 . LdBPK_060340.1 902 LYREEQR|GK 0.090 . LdBPK_060340.1 904 REEQRGK|P- 0.066 . ____________________________^_________________

  • Fasta :-

    >LdBPK_060340.1 ATGGCTGCACTTTTTCCGTGGGTGCCAACGTCGAATCTGGGCTACTCTTTATCGCGTAGG GTGGTGAACAAATGGTGCCCGCAACTCCGCAGCTCGTATCCGCTTCCTATGCTGGACGGA CCGTTCCCCACCGAGAAGCCTGAGGGTCTCGAGCTGCATGGAGAGACCCAGAAACCGGAC CCGTTCCGCTACATGGAAGACTTGTTCGACCGGAACACTCAAGAATATACGAAAAAGGAG ATGCAGCACTTCTCCCTGATTAGCAGCAAGTTTGACTTTCGACATTCCAAGGGTCGTTTG TGGGCGGAGCTTGATGCCAAGGTGGTGGTGAGCAGCCGTGAGGGCGGATACGACAAGGGC GAGGAGCGCATCGGTGACTACGTGTACTTTACCCGTGTCGTACCCGGGCACGACTCGAAT GCGATAGGGTTTTACCGGAAGCGATTTGGGGAGGTTGATCTCCTGGCCGAGGAACTCATC AACCCTCTCTTCCTCCAGCAACACTTCGGCTACAAGGACTGTTCCATTGGTATCTGCCGC GTCTCAGAAGACGGCCGCTACCTCGCATACACCCTTTCGGTGGAGGGTGGCGACAGGTAT TTGTGCCACATTCGCAGTGTTGACAATGCCACCCTGTTTCACGTGATTCGCGGTACAAAC ATCGTGAGCATCGAGTTTGGCTCCGGCAACCAGTTTTTCTACACCGAGTCGAACGAGTTG AACCGGCCTCACCGCGTCATGATGCAGGAAATACGACCCGGCATATTAGAGCCACCGGTG GAGATTTACCGTGACGACGACGAGCAGTTTTTCGTGGATGTGCGCAAGACGAAGGATAAC AAGTACGTCACGATAACCTCGGACTCGAAGGTGAACTGCAACGCGCTAGTCGTGCCCGCA TCCTTCCCTGTTATTCCGACCCCTCTCAAGTCCTTCTTCAAGGAGGGCAAGCCGCTCGAG ATTGCAGGGAAGTCAGGATGGAACTGGCTGGATCACTACAACGGCAGCTTTGTCATGGTG ACATCCGACAAGGGGCCGAACTACCGTGTGGTGTACATTCGCGACGAGGTGGCGCTGGCT TATGGGAAGGAGGCGGAGTGGAAAGAGCTTGTGCCGCACCGCGACAACGTGCAAATCGAT GACGTCGATCTGTTCCACGGTCGCATCATCCTTCACGAGTCGCACTTCGCCTTCGAGCGC ATTCAGCACATCCGCGTCATCAAGTGCGACGGCGGCCTCGACGCCGCTGCGCAGACACCA CGAAGCGAGGACGTGGTGCTGCACTTTCCCCCGCTAAGCACGGTGACCCCAGGCCTGAAC AAGAACTTTAGGCAAAAGGCAATGAGCTTCGTCTACAGCAGCCTGATTCAGCCGCCGCGC GACTGTGTCTTCAACTTCGACTCTGACATCACGCCTAGCCAGGCGAGGCTGTGCGCGTCT GAGGCGCTCTTCACACAACGCCAGTCGGAGCACTTCACGCCGTGGGATTACATGTGGCCC TACAGCATCTACCGCGATGTCTGCGTCTCGGAAGACGGGACGGAGATCCCAATAACGATA TGCCAGCGCCGTGACGCATTCATTCAGGAAGCGACGGACTTTGAGGCGCAGCCCAACACG CCCAAGCACTGCCTCATCTACGTGTACGGCTCCTACGGCGAAGTTCCGTCGATGCACTTC CAGCTGGCCCCGTACATGTGGATGTTGCGGCGACGTTGGACCGTTGCCTTTGCGCACGTC CGTGGCGGCGGCGAGCTGCCCAACTGGGCACAGCTGGGGAAGGGAGAGAACAAAATCAAG TCTATCCAGGACTTCATCGCGTGCTGCGAGCACATGGTGGACATGGGCTACACAAAGCCA GAGCTGATGGTGGCTGCGGGGGCGAGCGCCGGCTGTGTACCGATTGCGGCAGCCATGAAC ATGCGCGGGTGTGGGCTGTTCGGCAATGTACTGATGCGGTCGCCGTTCCTGGATATCATT AACACCATGATAGATCCCGACCTCCCGCTTTCACTCGCCGAGCGCGAGGACTGGGGTGAC CCGCTCAACAACAAGAGAGACCTGGACCTGCTCAAGCAGTACGACCCATACTACAACTTG AACGACCGTGTGACGTACCCTGGAATGATGATATCGGCCTGCCTCGATGACGACCGTGTT CCGGCTTGGAACGCGCTCAAGTACGTGGCAAAGCTGCGGCAGCAGCGCACCCGCAAGGAC GTGGATCCGGTCGCTCGCCCTCTGGTGCTGCGCATGCGACCAAGCGGCGGCCACTACTTC TGGGGCGACACAGAGAACATCTGCGAGGAGCTTGCGTTTCTGTGTTCGCAGTTGGACCTT GAGGGTCCTGGCAAGATGCTTAACGACATGGATGTCATGACCCACATGCACAACCTTACC GCCACCGGTGCCATGGATCACGACGACCAGCAAAAGGTGTTCCTGAAATGGGATAACTGG GAGAGGGAGCGCATCGACTACCACGTGAAGCTGAACTCCTTCAATTGGGAGCCGAACTTC CGCACGGTGAAGGCTCGGAAGGAGCCGTTCTTCTGGGTGCCGACGGACTCGGAGCTTGAC CAGAAGAAGGTGGACGAAATTTTTCGTGCAAAGGAACGCGACGCCCGAGAGAGCGTTCGC TCTGGGGCGAAGCTGGGGAGCTTTGGCAAGGCAACCGGTCGCAACCTCTATCGAGAGGAG CAGCGCGGGAAGCCGTAG
  • Download Fasta

  • Fasta :-

    MAALFPWVPTSNLGYSLSRRVVNKWCPQLRSSYPLPMLDGPFPTEKPEGLELHGETQKPD PFRYMEDLFDRNTQEYTKKEMQHFSLISSKFDFRHSKGRLWAELDAKVVVSSREGGYDKG EERIGDYVYFTRVVPGHDSNAIGFYRKRFGEVDLLAEELINPLFLQQHFGYKDCSIGICR VSEDGRYLAYTLSVEGGDRYLCHIRSVDNATLFHVIRGTNIVSIEFGSGNQFFYTESNEL NRPHRVMMQEIRPGILEPPVEIYRDDDEQFFVDVRKTKDNKYVTITSDSKVNCNALVVPA SFPVIPTPLKSFFKEGKPLEIAGKSGWNWLDHYNGSFVMVTSDKGPNYRVVYIRDEVALA YGKEAEWKELVPHRDNVQIDDVDLFHGRIILHESHFAFERIQHIRVIKCDGGLDAAAQTP RSEDVVLHFPPLSTVTPGLNKNFRQKAMSFVYSSLIQPPRDCVFNFDSDITPSQARLCAS EALFTQRQSEHFTPWDYMWPYSIYRDVCVSEDGTEIPITICQRRDAFIQEATDFEAQPNT PKHCLIYVYGSYGEVPSMHFQLAPYMWMLRRRWTVAFAHVRGGGELPNWAQLGKGENKIK SIQDFIACCEHMVDMGYTKPELMVAAGASAGCVPIAAAMNMRGCGLFGNVLMRSPFLDII NTMIDPDLPLSLAEREDWGDPLNNKRDLDLLKQYDPYYNLNDRVTYPGMMISACLDDDRV PAWNALKYVAKLRQQRTRKDVDPVARPLVLRMRPSGGHYFWGDTENICEELAFLCSQLDL EGPGKMLNDMDVMTHMHNLTATGAMDHDDQQKVFLKWDNWERERIDYHVKLNSFNWEPNF RTVKARKEPFFWVPTDSELDQKKVDEIFRAKERDARESVRSGAKLGSFGKATGRNLYREE QRGKP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_060340.1878 SDARESVRSG0.997unspLdBPK_060340.1878 SDARESVRSG0.997unspLdBPK_060340.1878 SDARESVRSG0.997unspLdBPK_060340.1111 SKVVVSSREG0.994unspLdBPK_060340.1419 TAAAQTPRSE0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India