LdBPK_080960.1 | cathepsin L-like protease (fragment)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_080960.1SP0.0011260.9969860.001888CS pos: 27-28. ARA-IY. Pr: 0.7275
No Results

  • Fasta :-

    >LdBPK_080960.1 MATSRAALCAVAVVCVVLAAACAPARAIYVGTPAAALFEEFKRTYRRAYGTLAEEQQRLA NFERNLELMREHQARNPHARFGITKFFDLSEAEFAARYLNGAAYFAAAKQHAGQHYRKAR ADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVS CDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDG YVMIPSNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTSCAGDALNHGVLLVGYNKTGG VPYWVIKNSWGEDWGEKGYVRVAMGRNACLLSEYPVSAHVPRSLT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_080960.1.fa Sequence name : LdBPK_080960 Sequence length : 345 VALUES OF COMPUTED PARAMETERS Coef20 : 5.343 CoefTot : 1.809 ChDiff : -1 ZoneTo : 38 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.106 2.865 0.714 0.759 MesoH : 0.227 0.555 -0.176 0.358 MuHd_075 : 16.737 12.369 3.434 4.906 MuHd_095 : 15.813 9.876 4.080 5.214 MuHd_100 : 15.970 10.675 3.059 5.048 MuHd_105 : 18.970 11.540 4.334 5.041 Hmax_075 : 15.200 22.800 7.350 5.780 Hmax_095 : 14.175 20.300 6.211 6.388 Hmax_100 : 14.100 19.100 6.567 6.200 Hmax_105 : 13.100 15.983 5.757 5.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8143 0.1857 DFMC : 0.8578 0.1422
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 345 LdBPK_080960.1 MATSRAALCAVAVVCVVLAAACAPARAIYVGTPAAALFEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHAR 80 FGITKFFDLSEAEFAARYLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIE 160 SQWARAGHGLVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDG 240 YVMIPSNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTSCAGDALNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYV 320 RVAMGRNACLLSEYPVSAHVPRSLT 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_080960.1 5 --MATSR|AA 0.098 . LdBPK_080960.1 26 AACAPAR|AI 0.119 . LdBPK_080960.1 42 ALFEEFK|RT 0.060 . LdBPK_080960.1 43 LFEEFKR|TY 0.160 . LdBPK_080960.1 46 EFKRTYR|RA 0.220 . LdBPK_080960.1 47 FKRTYRR|AY 0.209 . LdBPK_080960.1 58 LAEEQQR|LA 0.088 . LdBPK_080960.1 64 RLANFER|NL 0.115 . LdBPK_080960.1 70 RNLELMR|EH 0.074 . LdBPK_080960.1 75 MREHQAR|NP 0.152 . LdBPK_080960.1 80 ARNPHAR|FG 0.247 . LdBPK_080960.1 85 ARFGITK|FF 0.086 . LdBPK_080960.1 97 EAEFAAR|YL 0.095 . LdBPK_080960.1 109 AYFAAAK|QH 0.056 . LdBPK_080960.1 117 HAGQHYR|KA 0.135 . LdBPK_080960.1 118 AGQHYRK|AR 0.074 . LdBPK_080960.1 120 QHYRKAR|AD 0.336 . LdBPK_080960.1 133 PDAVDWR|EK 0.136 . LdBPK_080960.1 135 AVDWREK|GA 0.064 . LdBPK_080960.1 142 GAVTPVK|NQ 0.081 . LdBPK_080960.1 165 IESQWAR|AG 0.118 . LdBPK_080960.1 184 LVSCDDK|DN 0.091 . LdBPK_080960.1 202 AFEWLLR|HM 0.093 . LdBPK_080960.1 212 GIVFTEK|SY 0.066 . LdBPK_080960.1 231 ECLNSSK|LV 0.067 . LdBPK_080960.1 297 LLVGYNK|TG 0.057 . LdBPK_080960.1 307 VPYWVIK|NS 0.069 . LdBPK_080960.1 317 GEDWGEK|GY 0.060 . LdBPK_080960.1 321 GEKGYVR|VA 0.085 . LdBPK_080960.1 326 VRVAMGR|NA 0.087 . LdBPK_080960.1 342 VSAHVPR|SL 0.229 . ____________________________^_________________

  • Fasta :-

    >LdBPK_080960.1 ATGGCGACGTCGAGGGCCGCTCTCTGCGCTGTTGCGGTCGTGTGCGTGGTGCTTGCGGCT GCCTGCGCGCCTGCGCGCGCGATATACGTGGGCACGCCGGCTGCTGCGCTGTTCGAGGAG TTCAAGCGGACGTACCGGCGCGCGTACGGGACGCTGGCCGAGGAGCAGCAGCGGCTGGCG AACTTCGAGCGCAACCTGGAGCTGATGCGCGAGCATCAGGCGAGGAACCCACACGCGAGG TTCGGGATCACGAAGTTCTTCGACCTGTCGGAGGCGGAGTTCGCCGCGCGCTACCTGAAC GGCGCCGCGTACTTCGCAGCGGCGAAGCAGCACGCCGGCCAGCACTACCGCAAGGCGCGC GCGGACCTGTCGGCGGTGCCTGATGCGGTGGACTGGCGCGAGAAGGGCGCCGTGACGCCG GTGAAGAATCAAGGCGCGTGCGGGTCGTGCTGGGCGTTCTCGGCGGTCGGCAACATCGAG TCGCAGTGGGCCCGTGCCGGCCACGGCTTGGTGAGCCTGTCGGAGCAGCAGCTGGTGAGC TGCGATGACAAAGACAACGGCTGCAACGGCGGGCTGATGCTGCAGGCGTTCGAGTGGCTG CTGCGACACATGTACGGGATCGTGTTCACGGAGAAGAGCTACCCCTACACGTCCGGCAAC GGTGATGTGGCCGAGTGCTTGAACAGCAGTAAACTCGTTCCCGGCGCGCAAATCGACGGC TACGTGATGATCCCGAGCAACGAAACGGTTATGGCTGCGTGGCTTGCGGAGAATGGCCCC ATCGCGATTGCGGTTGACGCCAGCTCCTTCATGTCTTACCAGAGCGGCGTGCTGACCAGC TGCGCTGGCGATGCACTGAACCACGGCGTGCTGCTCGTCGGGTACAACAAGACCGGTGGG GTTCCGTACTGGGTGATCAAGAACTCGTGGGGTGAGGACTGGGGCGAGAAGGGCTACGTG CGCGTGGCCATGGGGAGGAACGCGTGCCTGCTCAGTGAATACCCCGTGTCCGCGCATGTG CCGCGGAGTCTCACC
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  • Fasta :-

    MATSRAALCAVAVVCVVLAAACAPARAIYVGTPAAALFEEFKRTYRRAYGTLAEEQQRLA NFERNLELMREHQARNPHARFGITKFFDLSEAEFAARYLNGAAYFAAAKQHAGQHYRKAR ADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVGNIESQWARAGHGLVSLSEQQLVS CDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDG YVMIPSNETVMAAWLAENGPIAIAVDASSFMSYQSGVLTSCAGDALNHGVLLVGYNKTGG VPYWVIKNSWGEDWGEKGYVRVAMGRNACLLSEYPVSAHVPRSLT

  • title: active site
  • coordinates: Q144,C150,H288,N308
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India