LdBPK_090390.1 | cysteine peptidase, Clan CA, family C19, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_090390.1OTHER0.6335060.3022850.064209
No Results

  • Fasta :-

    >LdBPK_090390.1 MRLRVLPRCRRTITSYLLSIMSATAASSRRKQHHESLKEESMISFEMELDEAIELPLDVS AVAPTDAALSAPLGGKKITMPAARAASESRAAWSNGSTASLRFAVCGNGKELPNTPATAD GVGSPIATPDNAATTTYSAAAPSRTLTWKDTSASQRRAEAQASRQDDFNPMVLCPLQNLG NTCYFNAGVQLLVNCPALVYAVRNSPFAQSTQSNGPLTAHAVSMPRAEAATATTKLCLKG GAATHTLFQEFSTLLARMEMGCAAGERAISPICALDSLAQAYPQFEGRSQQDAAEMMTSL LASLEEEGGQYVEVAQLLQSFEEDAAALRQGVTSLASSPRASEPVARALKDATAPLLEAE TAPSASPHRRDYSEPCNIEEYSQPSLLSSTSEDTFLPGPRSAHFFTVLRLMERVNRENEL LERRVKQRQGIAYTNSFKPPRLHFNPLLDGFRGYTLSEVECHNCRAVSRVVSPFNGLLLD VPTAKQRRRYALAHPNVPRRVDFDGQLRQVKKPFRLTWWNPLSLCVAAWRQLKRFFQDPF PYPLWLDECLDIHFEPEVLRGCNRYRCESCDTTTDATKSETLLALPEYLLIHMKRFEAGR FFNSKKSDSVFFPTSWRPLTKMQARQSPINTDDAPPALPEYLDLRHYLHSSVAPFAEPIP PCLWSTGNEPHQQHHASRDDASSPASSIATTYTLDGIVNHHGGYDGGHYTVFLYKATEER QAWVYISDDEVEQAEEVVATDTEYVLLYRRQPLVQAAPESDEAEQLRRKACYYLSQSSPS CPAPNTAAATTAGPKSSKLHNRCPFSSSSAGGAASAPPHAATAATEPWVYISRMWLQRVV FMHEPGPIVNRLCYCRPEDQGRVSMYRTIFPATVKVPAEVPHVHGPPVSWFYVPITQRDY DIFYNAFGGNAAVTASEYESLRAMQGKFCAAIDLAERQRGSAARPAPRR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_090390.1.fa Sequence name : LdBPK_090390 Sequence length : 949 VALUES OF COMPUTED PARAMETERS Coef20 : 5.397 CoefTot : 1.260 ChDiff : -3 ZoneTo : 34 KR : 8 DE : 0 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.524 1.312 0.170 0.494 MesoH : -0.019 0.322 -0.236 0.206 MuHd_075 : 23.174 13.550 6.313 5.336 MuHd_095 : 37.036 29.668 10.240 10.123 MuHd_100 : 37.062 27.086 10.602 10.216 MuHd_105 : 36.664 22.490 9.960 9.384 Hmax_075 : 15.050 18.200 4.866 4.503 Hmax_095 : 16.713 20.912 4.782 6.379 Hmax_100 : 15.700 22.000 5.329 6.650 Hmax_105 : 13.700 17.000 4.489 5.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0129 0.9871 DFMC : 0.0144 0.9856 This protein is probably imported in mitochondria. f(Ser) = 0.1471 f(Arg) = 0.2059 CMi = 0.41051 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 949 LdBPK_090390.1 MRLRVLPRCRRTITSYLLSIMSATAASSRRKQHHESLKEESMISFEMELDEAIELPLDVSAVAPTDAALSAPLGGKKITM 80 PAARAASESRAAWSNGSTASLRFAVCGNGKELPNTPATADGVGSPIATPDNAATTTYSAAAPSRTLTWKDTSASQRRAEA 160 QASRQDDFNPMVLCPLQNLGNTCYFNAGVQLLVNCPALVYAVRNSPFAQSTQSNGPLTAHAVSMPRAEAATATTKLCLKG 240 GAATHTLFQEFSTLLARMEMGCAAGERAISPICALDSLAQAYPQFEGRSQQDAAEMMTSLLASLEEEGGQYVEVAQLLQS 320 FEEDAAALRQGVTSLASSPRASEPVARALKDATAPLLEAETAPSASPHRRDYSEPCNIEEYSQPSLLSSTSEDTFLPGPR 400 SAHFFTVLRLMERVNRENELLERRVKQRQGIAYTNSFKPPRLHFNPLLDGFRGYTLSEVECHNCRAVSRVVSPFNGLLLD 480 VPTAKQRRRYALAHPNVPRRVDFDGQLRQVKKPFRLTWWNPLSLCVAAWRQLKRFFQDPFPYPLWLDECLDIHFEPEVLR 560 GCNRYRCESCDTTTDATKSETLLALPEYLLIHMKRFEAGRFFNSKKSDSVFFPTSWRPLTKMQARQSPINTDDAPPALPE 640 YLDLRHYLHSSVAPFAEPIPPCLWSTGNEPHQQHHASRDDASSPASSIATTYTLDGIVNHHGGYDGGHYTVFLYKATEER 720 QAWVYISDDEVEQAEEVVATDTEYVLLYRRQPLVQAAPESDEAEQLRRKACYYLSQSSPSCPAPNTAAATTAGPKSSKLH 800 NRCPFSSSSAGGAASAPPHAATAATEPWVYISRMWLQRVVFMHEPGPIVNRLCYCRPEDQGRVSMYRTIFPATVKVPAEV 880 PHVHGPPVSWFYVPITQRDYDIFYNAFGGNAAVTASEYESLRAMQGKFCAAIDLAERQRGSAARPAPRR 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ..................................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_090390.1 2 -----MR|LR 0.062 . LdBPK_090390.1 4 ---MRLR|VL 0.083 . LdBPK_090390.1 8 RLRVLPR|CR 0.106 . LdBPK_090390.1 10 RVLPRCR|RT 0.077 . LdBPK_090390.1 11 VLPRCRR|TI 0.327 . LdBPK_090390.1 29 ATAASSR|RK 0.087 . LdBPK_090390.1 30 TAASSRR|KQ 0.160 . LdBPK_090390.1 31 AASSRRK|QH 0.118 . LdBPK_090390.1 38 QHHESLK|EE 0.068 . LdBPK_090390.1 76 SAPLGGK|KI 0.055 . LdBPK_090390.1 77 APLGGKK|IT 0.092 . LdBPK_090390.1 84 ITMPAAR|AA 0.178 . LdBPK_090390.1 90 RAASESR|AA 0.127 . LdBPK_090390.1 102 GSTASLR|FA 0.112 . LdBPK_090390.1 110 AVCGNGK|EL 0.058 . LdBPK_090390.1 144 SAAAPSR|TL 0.112 . LdBPK_090390.1 149 SRTLTWK|DT 0.115 . LdBPK_090390.1 156 DTSASQR|RA 0.155 . LdBPK_090390.1 157 TSASQRR|AE 0.173 . LdBPK_090390.1 164 AEAQASR|QD 0.087 . LdBPK_090390.1 203 ALVYAVR|NS 0.081 . LdBPK_090390.1 226 HAVSMPR|AE 0.080 . LdBPK_090390.1 235 AATATTK|LC 0.060 . LdBPK_090390.1 239 TTKLCLK|GG 0.058 . LdBPK_090390.1 257 FSTLLAR|ME 0.079 . LdBPK_090390.1 267 GCAAGER|AI 0.116 . LdBPK_090390.1 288 YPQFEGR|SQ 0.175 . LdBPK_090390.1 329 EDAAALR|QG 0.079 . LdBPK_090390.1 340 SLASSPR|AS 0.160 . LdBPK_090390.1 347 ASEPVAR|AL 0.130 . LdBPK_090390.1 350 PVARALK|DA 0.166 . LdBPK_090390.1 369 PSASPHR|RD 0.079 . LdBPK_090390.1 370 SASPHRR|DY 0.344 . LdBPK_090390.1 400 TFLPGPR|SA 0.126 . LdBPK_090390.1 409 HFFTVLR|LM 0.077 . LdBPK_090390.1 413 VLRLMER|VN 0.078 . LdBPK_090390.1 416 LMERVNR|EN 0.221 . LdBPK_090390.1 423 ENELLER|RV 0.093 . LdBPK_090390.1 424 NELLERR|VK 0.093 . LdBPK_090390.1 426 LLERRVK|QR 0.111 . LdBPK_090390.1 428 ERRVKQR|QG 0.148 . LdBPK_090390.1 438 AYTNSFK|PP 0.056 . LdBPK_090390.1 441 NSFKPPR|LH 0.084 . LdBPK_090390.1 452 PLLDGFR|GY 0.077 . LdBPK_090390.1 465 VECHNCR|AV 0.126 . LdBPK_090390.1 469 NCRAVSR|VV 0.135 . LdBPK_090390.1 485 LDVPTAK|QR 0.062 . LdBPK_090390.1 487 VPTAKQR|RR 0.075 . LdBPK_090390.1 488 PTAKQRR|RY 0.119 . LdBPK_090390.1 489 TAKQRRR|YA 0.231 . LdBPK_090390.1 499 AHPNVPR|RV 0.113 . LdBPK_090390.1 500 HPNVPRR|VD 0.244 . LdBPK_090390.1 508 DFDGQLR|QV 0.087 . LdBPK_090390.1 511 GQLRQVK|KP 0.098 . LdBPK_090390.1 512 QLRQVKK|PF 0.093 . LdBPK_090390.1 515 QVKKPFR|LT 0.088 . LdBPK_090390.1 530 LCVAAWR|QL 0.084 . LdBPK_090390.1 533 AAWRQLK|RF 0.099 . LdBPK_090390.1 534 AWRQLKR|FF 0.263 . LdBPK_090390.1 560 FEPEVLR|GC 0.082 . LdBPK_090390.1 564 VLRGCNR|YR 0.094 . LdBPK_090390.1 566 RGCNRYR|CE 0.095 . LdBPK_090390.1 578 TTTDATK|SE 0.060 . LdBPK_090390.1 594 YLLIHMK|RF 0.068 . LdBPK_090390.1 595 LLIHMKR|FE 0.228 . LdBPK_090390.1 600 KRFEAGR|FF 0.106 . LdBPK_090390.1 605 GRFFNSK|KS 0.074 . LdBPK_090390.1 606 RFFNSKK|SD 0.212 . LdBPK_090390.1 617 FFPTSWR|PL 0.082 . LdBPK_090390.1 621 SWRPLTK|MQ 0.067 . LdBPK_090390.1 625 LTKMQAR|QS 0.103 . LdBPK_090390.1 645 PEYLDLR|HY 0.072 . LdBPK_090390.1 678 QQHHASR|DD 0.138 . LdBPK_090390.1 715 YTVFLYK|AT 0.074 . LdBPK_090390.1 720 YKATEER|QA 0.111 . LdBPK_090390.1 749 EYVLLYR|RQ 0.065 . LdBPK_090390.1 750 YVLLYRR|QP 0.073 . LdBPK_090390.1 767 DEAEQLR|RK 0.076 . LdBPK_090390.1 768 EAEQLRR|KA 0.157 . LdBPK_090390.1 769 AEQLRRK|AC 0.070 . LdBPK_090390.1 795 ATTAGPK|SS 0.064 . LdBPK_090390.1 798 AGPKSSK|LH 0.059 . LdBPK_090390.1 802 SSKLHNR|CP 0.101 . LdBPK_090390.1 833 PWVYISR|MW 0.080 . LdBPK_090390.1 838 SRMWLQR|VV 0.199 . LdBPK_090390.1 851 PGPIVNR|LC 0.071 . LdBPK_090390.1 856 NRLCYCR|PE 0.114 . LdBPK_090390.1 862 RPEDQGR|VS 0.083 . LdBPK_090390.1 867 GRVSMYR|TI 0.119 . LdBPK_090390.1 875 IFPATVK|VP 0.056 . LdBPK_090390.1 898 YVPITQR|DY 0.096 . LdBPK_090390.1 922 SEYESLR|AM 0.088 . LdBPK_090390.1 927 LRAMQGK|FC 0.103 . LdBPK_090390.1 937 AIDLAER|QR 0.071 . LdBPK_090390.1 939 DLAERQR|GS 0.082 . LdBPK_090390.1 944 QRGSAAR|PA 0.120 . LdBPK_090390.1 948 AARPAPR|R- 0.090 . LdBPK_090390.1 949 ARPAPRR|-- 0.163 . ____________________________^_________________

  • Fasta :-

    >LdBPK_090390.1 ATGCGCTTGCGCGTGCTGCCACGGTGTCGCCGAACCATCACATCTTACCTGCTGTCCATC ATGTCCGCCACGGCAGCGTCGTCGCGGCGGAAGCAGCACCACGAGTCGCTCAAGGAGGAG TCGATGATCTCGTTCGAGATGGAGCTCGACGAGGCGATTGAGCTGCCGCTCGACGTGAGC GCCGTCGCACCGACAGACGCGGCGCTGAGCGCGCCGCTTGGGGGTAAAAAGATCACAATG CCAGCTGCAAGGGCCGCTTCGGAGAGCAGGGCTGCATGGAGTAACGGCAGCACCGCCAGC CTCAGATTCGCCGTGTGCGGCAACGGAAAGGAGCTCCCAAACACCCCCGCAACCGCCGAC GGCGTCGGCTCTCCCATCGCCACGCCAGACAATGCAGCTACCACAACCTACTCGGCGGCG GCGCCGTCACGCACGTTGACGTGGAAGGACACCAGCGCGTCTCAGCGGCGTGCCGAGGCG CAGGCGAGCCGCCAAGACGACTTCAACCCCATGGTCCTATGCCCGCTGCAGAACCTGGGC AACACGTGCTACTTCAACGCGGGTGTGCAGCTGCTCGTGAACTGCCCCGCCCTCGTCTAT GCAGTGCGCAACTCGCCATTTGCGCAGAGTACACAGAGCAACGGCCCCCTCACCGCCCAC GCCGTATCGATGCCGCGGGCTGAAGCGGCAACGGCAACGACGAAGCTGTGCCTGAAAGGG GGTGCCGCCACCCACACGCTCTTCCAGGAGTTCTCCACCCTGCTCGCCCGCATGGAAATG GGATGTGCAGCCGGTGAGAGGGCGATCTCGCCCATTTGTGCGCTCGACTCCCTCGCGCAG GCGTATCCGCAGTTCGAGGGTCGAAGCCAGCAAGACGCCGCAGAGATGATGACGTCGCTG CTGGCCAGCTTGGAGGAGGAGGGCGGTCAGTATGTGGAAGTGGCACAGCTGCTACAGTCG TTTGAAGAAGATGCCGCGGCGCTGCGGCAGGGCGTGACGTCCTTGGCCTCCTCTCCCCGG GCTTCGGAGCCAGTGGCGCGAGCTCTAAAGGACGCCACCGCGCCTCTCTTGGAAGCCGAG ACCGCGCCCTCCGCATCGCCGCATCGGCGCGATTACAGCGAGCCCTGCAACATCGAGGAG TACTCCCAACCATCGCTGCTCTCCTCCACTAGTGAGGACACCTTCCTGCCGGGTCCGCGC AGCGCGCACTTCTTCACCGTACTGCGGCTGATGGAACGGGTCAATCGCGAGAACGAACTA CTTGAGCGGCGTGTGAAGCAGCGGCAAGGCATTGCCTACACCAACTCCTTCAAGCCCCCG CGGCTACACTTCAACCCGCTGCTGGACGGCTTCCGCGGGTATACGCTGTCGGAGGTGGAG TGCCACAACTGCCGCGCGGTATCGCGCGTGGTGAGCCCCTTCAATGGGTTGCTGCTGGAT GTGCCGACGGCGAAGCAGCGCCGGCGCTACGCGTTGGCGCACCCGAATGTGCCGCGCCGC GTCGACTTCGATGGGCAGCTGCGGCAGGTGAAGAAGCCGTTTCGGCTGACGTGGTGGAAC CCCCTCTCCCTCTGCGTGGCGGCGTGGAGGCAGCTGAAGCGGTTCTTCCAGGACCCGTTC CCGTACCCGCTGTGGCTGGACGAGTGCCTCGACATTCACTTCGAGCCGGAGGTGCTGCGC GGGTGTAACAGGTACCGTTGCGAGTCCTGCGACACCACCACCGACGCCACCAAGTCGGAG ACGCTTCTTGCCCTGCCCGAGTACCTGCTCATCCACATGAAGCGCTTCGAGGCCGGCCGC TTCTTTAACAGCAAGAAGTCGGACTCAGTCTTCTTTCCCACCTCGTGGCGGCCGCTCACG AAGATGCAGGCGAGGCAGTCGCCTATCAACACGGACGACGCGCCGCCAGCGCTGCCGGAG TACCTCGACCTGCGGCACTACCTGCACAGCAGCGTCGCACCGTTCGCAGAGCCGATCCCG CCCTGTCTGTGGAGCACCGGCAACGAGCCCCACCAGCAGCATCACGCGAGCAGGGACGAT GCCAGCAGCCCCGCCAGCTCCATCGCAACCACCTACACGCTAGACGGCATTGTCAACCAC CACGGCGGCTACGACGGCGGCCATTACACCGTCTTCCTCTACAAGGCGACGGAGGAGCGG CAGGCGTGGGTGTACATCAGCGACGATGAGGTGGAGCAAGCGGAGGAAGTAGTGGCGACA GATACCGAGTACGTCCTGCTGTATCGCCGCCAACCCCTCGTGCAGGCGGCACCAGAGTCG GACGAGGCAGAACAGCTGCGCCGAAAGGCGTGCTACTACCTCTCTCAGTCATCCCCCTCC TGCCCTGCCCCAAACACCGCGGCAGCGACGACCGCCGGCCCTAAATCCAGCAAGCTTCAT AACAGGTGCCCCTTCTCGTCCTCTTCGGCAGGCGGCGCGGCTAGTGCGCCACCTCACGCG GCAACCGCGGCGACCGAGCCGTGGGTGTACATCTCGCGCATGTGGCTTCAGCGCGTCGTC TTCATGCACGAGCCGGGCCCGATTGTGAATCGCCTGTGTTACTGCCGTCCAGAGGATCAG GGGCGGGTGAGCATGTATCGGACCATCTTTCCAGCCACGGTGAAAGTGCCGGCGGAGGTG CCCCACGTTCACGGCCCGCCGGTGAGCTGGTTCTACGTGCCCATCACACAGCGGGACTAC GACATTTTTTACAACGCGTTTGGCGGCAACGCAGCCGTGACGGCGAGCGAATACGAGTCA CTGCGTGCAATGCAGGGCAAGTTCTGCGCCGCCATTGATTTAGCGGAGCGGCAGCGAGGC AGCGCAGCTCGCCCTGCTCCCCGGCGCTGA
  • Download Fasta

  • Fasta :-

    MRLRVLPRCRRTITSYLLSIMSATAASSRRKQHHESLKEESMISFEMELDEAIELPLDVS AVAPTDAALSAPLGGKKITMPAARAASESRAAWSNGSTASLRFAVCGNGKELPNTPATAD GVGSPIATPDNAATTTYSAAAPSRTLTWKDTSASQRRAEAQASRQDDFNPMVLCPLQNLG NTCYFNAGVQLLVNCPALVYAVRNSPFAQSTQSNGPLTAHAVSMPRAEAATATTKLCLKG GAATHTLFQEFSTLLARMEMGCAAGERAISPICALDSLAQAYPQFEGRSQQDAAEMMTSL LASLEEEGGQYVEVAQLLQSFEEDAAALRQGVTSLASSPRASEPVARALKDATAPLLEAE TAPSASPHRRDYSEPCNIEEYSQPSLLSSTSEDTFLPGPRSAHFFTVLRLMERVNRENEL LERRVKQRQGIAYTNSFKPPRLHFNPLLDGFRGYTLSEVECHNCRAVSRVVSPFNGLLLD VPTAKQRRRYALAHPNVPRRVDFDGQLRQVKKPFRLTWWNPLSLCVAAWRQLKRFFQDPF PYPLWLDECLDIHFEPEVLRGCNRYRCESCDTTTDATKSETLLALPEYLLIHMKRFEAGR FFNSKKSDSVFFPTSWRPLTKMQARQSPINTDDAPPALPEYLDLRHYLHSSVAPFAEPIP PCLWSTGNEPHQQHHASRDDASSPASSIATTYTLDGIVNHHGGYDGGHYTVFLYKATEER QAWVYISDDEVEQAEEVVATDTEYVLLYRRQPLVQAAPESDEAEQLRRKACYYLSQSSPS CPAPNTAAATTAGPKSSKLHNRCPFSSSSAGGAASAPPHAATAATEPWVYISRMWLQRVV FMHEPGPIVNRLCYCRPEDQGRVSMYRTIFPATVKVPAEVPHVHGPPVSWFYVPITQRDY DIFYNAFGGNAAVTASEYESLRAMQGKFCAAIDLAERQRGSAARPAPRR

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_090390.1147 TSRTLTWKDT0.993unspLdBPK_090390.1147 TSRTLTWKDT0.993unspLdBPK_090390.1147 TSRTLTWKDT0.993unspLdBPK_090390.1154 SDTSASQRRA0.996unspLdBPK_090390.1270 SERAISPICA0.995unspLdBPK_090390.1303 SSLLASLEEE0.995unspLdBPK_090390.1338 SSLASSPRAS0.998unspLdBPK_090390.1342 SSPRASEPVA0.99unspLdBPK_090390.1366 SAPSASPHRR0.993unspLdBPK_090390.1627 SQARQSPINT0.998unspLdBPK_090390.1864 SQGRVSMYRT0.997unspLdBPK_090390.136 SQHHESLKEE0.996unspLdBPK_090390.187 SARAASESRA0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India