LdBPK_090820.1 | oligopeptidase b

_IDPredictionOTHERSPmTPCS_Position
LdBPK_090820.1OTHER0.9453730.0029950.051631
No Results

  • Fasta :-

    >LdBPK_090820.1 MLSGNTIAASAQPPIAAKKPHRVTFGYVEGEDRGPNPMNPPRYREDPYFWMRDDNRKDPA VIEHLNKEKAYFQARSADIAQLRDDIYTEHISHIKEDDMSAPYVYGKYRYYTREVKGKSY KIYCRVSKDKEPGDVAAEEVIIDVNQVAEGKPFCDVMEVKPAPPEHDLVAFSVDMSGNEV YTIEFKRISDPCQTIADKVSGTNGEIVWGPDQTSLFYVTKDETLRDNKVWRHVMGKPQSE DVCLYEENNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRRGNAHNTLEIVRPREKG VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNY LVVTGRRAGLTRIWTMMVDPQDGVFKASTGLREVVMEEPIFTVHLVAFQMLEYEEPTFRM EYSSLATPNTWLDVNPQDHSRTAVKVREVGGGFDAANYKVERRFATAPDQTKIPLSVVYH KDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSEMGRAWYEIG AKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLVGAVLNMRPDLFKVALAG VPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGL HDPRVAYWEPAKWVSKLRECKTDNNEILLNMDMESGHFSAKDRYKFWKESAIQQAFVCKH LKSTVRLLVRR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_090820.1.fa Sequence name : LdBPK_090820 Sequence length : 731 VALUES OF COMPUTED PARAMETERS Coef20 : 3.703 CoefTot : -0.984 ChDiff : -16 ZoneTo : 28 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.929 1.453 0.110 0.528 MesoH : -0.035 0.652 -0.199 0.297 MuHd_075 : 24.669 17.355 6.644 5.111 MuHd_095 : 21.175 11.814 4.479 3.931 MuHd_100 : 21.604 6.982 4.824 3.607 MuHd_105 : 29.655 9.315 7.832 5.260 Hmax_075 : 7.800 18.317 3.519 4.040 Hmax_095 : 5.513 9.800 -1.117 2.494 Hmax_100 : 6.200 6.700 0.537 2.790 Hmax_105 : 7.117 3.900 0.156 2.543 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7204 0.2796 DFMC : 0.6117 0.3883
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 731 LdBPK_090820.1 MLSGNTIAASAQPPIAAKKPHRVTFGYVEGEDRGPNPMNPPRYREDPYFWMRDDNRKDPAVIEHLNKEKAYFQARSADIA 80 QLRDDIYTEHISHIKEDDMSAPYVYGKYRYYTREVKGKSYKIYCRVSKDKEPGDVAAEEVIIDVNQVAEGKPFCDVMEVK 160 PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPCQTIADKVSGTNGEIVWGPDQTSLFYVTKDETLRDNKVWRHVMGKPQSE 240 DVCLYEENNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRRGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEG 320 GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVTGRRAGLTRIWTMMVDPQDGVFKASTGLREVVMEEPI 400 FTVHLVAFQMLEYEEPTFRMEYSSLATPNTWLDVNPQDHSRTAVKVREVGGGFDAANYKVERRFATAPDQTKIPLSVVYH 480 KDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSEMGRAWYEIGAKYLTKRNTFSDFIAAAEFL 560 VNAKLTTPSQLACEGRSAGGLLVGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSY 640 SPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNMDMESGHFSAKDRYKFWKESAIQQAFVCKH 720 LKSTVRLLVRR 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ........... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_090820.1 18 QPPIAAK|KP 0.067 . LdBPK_090820.1 19 PPIAAKK|PH 0.093 . LdBPK_090820.1 22 AAKKPHR|VT 0.111 . LdBPK_090820.1 33 YVEGEDR|GP 0.074 . LdBPK_090820.1 42 NPMNPPR|YR 0.126 . LdBPK_090820.1 44 MNPPRYR|ED 0.074 . LdBPK_090820.1 52 DPYFWMR|DD 0.111 . LdBPK_090820.1 56 WMRDDNR|KD 0.091 . LdBPK_090820.1 57 MRDDNRK|DP 0.111 . LdBPK_090820.1 67 VIEHLNK|EK 0.056 . LdBPK_090820.1 69 EHLNKEK|AY 0.072 . LdBPK_090820.1 75 KAYFQAR|SA 0.264 . LdBPK_090820.1 83 ADIAQLR|DD 0.118 . LdBPK_090820.1 95 EHISHIK|ED 0.062 . LdBPK_090820.1 107 APYVYGK|YR 0.066 . LdBPK_090820.1 109 YVYGKYR|YY 0.116 . LdBPK_090820.1 113 KYRYYTR|EV 0.100 . LdBPK_090820.1 116 YYTREVK|GK 0.106 . LdBPK_090820.1 118 TREVKGK|SY 0.119 . LdBPK_090820.1 121 VKGKSYK|IY 0.072 . LdBPK_090820.1 125 SYKIYCR|VS 0.095 . LdBPK_090820.1 128 IYCRVSK|DK 0.216 . LdBPK_090820.1 130 CRVSKDK|EP 0.083 . LdBPK_090820.1 151 NQVAEGK|PF 0.067 . LdBPK_090820.1 160 CDVMEVK|PA 0.070 . LdBPK_090820.1 186 VYTIEFK|RI 0.059 . LdBPK_090820.1 187 YTIEFKR|IS 0.228 . LdBPK_090820.1 198 CQTIADK|VS 0.064 . LdBPK_090820.1 220 SLFYVTK|DE 0.066 . LdBPK_090820.1 225 TKDETLR|DN 0.100 . LdBPK_090820.1 228 ETLRDNK|VW 0.095 . LdBPK_090820.1 231 RDNKVWR|HV 0.278 . LdBPK_090820.1 236 WRHVMGK|PQ 0.076 . LdBPK_090820.1 258 FSAFMYK|AA 0.093 . LdBPK_090820.1 283 VHLLDLR|RG 0.063 . LdBPK_090820.1 284 HLLDLRR|GN 0.113 . LdBPK_090820.1 295 NTLEIVR|PR 0.079 . LdBPK_090820.1 297 LEIVRPR|EK 0.099 . LdBPK_090820.1 299 IVRPREK|GV 0.077 . LdBPK_090820.1 302 PREKGVR|YD 0.102 . LdBPK_090820.1 326 GGAVNHK|LL 0.067 . LdBPK_090820.1 332 KLLIAPR|GQ 0.076 . LdBPK_090820.1 357 MESIAVR|SN 0.154 . LdBPK_090820.1 366 YLVVTGR|RA 0.097 . LdBPK_090820.1 367 LVVTGRR|AG 0.096 . LdBPK_090820.1 372 RRAGLTR|IW 0.113 . LdBPK_090820.1 386 PQDGVFK|AS 0.066 . LdBPK_090820.1 392 KASTGLR|EV 0.165 . LdBPK_090820.1 419 YEEPTFR|ME 0.083 . LdBPK_090820.1 441 NPQDHSR|TA 0.126 . LdBPK_090820.1 445 HSRTAVK|VR 0.069 . LdBPK_090820.1 447 RTAVKVR|EV 0.350 . LdBPK_090820.1 459 FDAANYK|VE 0.057 . LdBPK_090820.1 462 ANYKVER|RF 0.098 . LdBPK_090820.1 463 NYKVERR|FA 0.212 . LdBPK_090820.1 472 TAPDQTK|IP 0.059 . LdBPK_090820.1 481 LSVVYHK|DL 0.102 . LdBPK_090820.1 517 HLPYCDR|GM 0.088 . LdBPK_090820.1 527 FAIAHIR|GG 0.108 . LdBPK_090820.1 534 GGSEMGR|AW 0.126 . LdBPK_090820.1 542 WYEIGAK|YL 0.063 . LdBPK_090820.1 546 GAKYLTK|RN 0.061 . LdBPK_090820.1 547 AKYLTKR|NT 0.164 . LdBPK_090820.1 564 EFLVNAK|LT 0.063 . LdBPK_090820.1 576 QLACEGR|SA 0.308 . LdBPK_090820.1 590 GAVLNMR|PD 0.066 . LdBPK_090820.1 595 MRPDLFK|VA 0.074 . LdBPK_090820.1 632 GNPNEYK|YY 0.087 . LdBPK_090820.1 647 SPMDNVR|AQ 0.099 . LdBPK_090820.1 664 CGLHDPR|VA 0.084 . LdBPK_090820.1 672 AYWEPAK|WV 0.086 . LdBPK_090820.1 676 PAKWVSK|LR 0.060 . LdBPK_090820.1 678 KWVSKLR|EC 0.085 . LdBPK_090820.1 681 SKLRECK|TD 0.100 . LdBPK_090820.1 701 SGHFSAK|DR 0.081 . LdBPK_090820.1 703 HFSAKDR|YK 0.182 . LdBPK_090820.1 705 SAKDRYK|FW 0.082 . LdBPK_090820.1 708 DRYKFWK|ES 0.088 . LdBPK_090820.1 719 QQAFVCK|HL 0.071 . LdBPK_090820.1 722 FVCKHLK|ST 0.073 . LdBPK_090820.1 726 HLKSTVR|LL 0.077 . LdBPK_090820.1 730 TVRLLVR|R- 0.084 . LdBPK_090820.1 731 VRLLVRR|-- 0.143 . ____________________________^_________________

  • Fasta :-

    >LdBPK_090820.1 ATGTTGTCGGGCAACACCATCGCGGCCTCTGCGCAGCCGCCGATCGCCGCCAAGAAGCCG CACCGCGTCACGTTCGGCTACGTGGAGGGTGAGGACCGCGGCCCAAACCCGATGAATCCG CCGCGCTACCGCGAGGACCCGTATTTTTGGATGCGCGATGACAATCGCAAGGATCCGGCC GTGATTGAGCACCTCAACAAGGAGAAGGCCTACTTCCAGGCGCGCAGCGCCGACATTGCG CAGCTGCGCGACGACATCTACACGGAGCACATATCGCACATCAAGGAGGACGACATGTCC GCGCCGTACGTGTACGGCAAGTACCGGTACTACACCCGCGAGGTGAAGGGTAAGTCGTAC AAGATTTACTGCCGCGTGTCCAAGGACAAGGAGCCGGGCGACGTCGCGGCAGAGGAGGTC ATCATCGATGTCAACCAAGTCGCCGAGGGCAAACCGTTCTGTGACGTGATGGAGGTGAAG CCAGCACCGCCGGAGCACGACCTCGTGGCCTTCTCTGTGGACATGAGCGGTAACGAGGTG TACACGATCGAATTTAAAAGGATTTCGGACCCGTGCCAAACTATCGCCGACAAGGTGAGC GGCACCAATGGCGAGATCGTGTGGGGCCCGGACCAGACCTCCTTATTCTACGTGACCAAA GACGAGACACTGCGCGATAACAAGGTGTGGCGCCACGTGATGGGCAAGCCGCAGTCCGAG GACGTCTGCCTCTACGAGGAGAACAACCCGCTGTTCAGCGCCTTCATGTACAAGGCCGCG GACACAAACACACTGTGCATCGGCTCGCAGTCGCCGGAGACGGCAGAGGTGCACCTGCTT GATCTGCGCAGGGGCAACGCCCACAATACGCTTGAAATTGTGCGGCCGCGCGAGAAGGGC GTGCGCTACGACGTGCAGATGCACGGCACCAGCCATCTTGTGATCCTCACCAACGAAGGC GGGGCGGTGAACCACAAGCTTCTCATAGCGCCGCGCGGGCAGCCGAGCGACTGGTCACAT GTGCTGGTGGATCACAGCGAGGACGTGTTTATGGAGAGCATCGCGGTGCGCTCGAACTAC CTCGTCGTGACAGGCCGCCGCGCCGGGCTGACGCGCATCTGGACGATGATGGTGGACCCG CAGGATGGCGTCTTCAAGGCTAGCACCGGGCTGCGCGAGGTGGTGATGGAGGAGCCGATC TTCACGGTGCACCTCGTGGCGTTCCAGATGTTGGAGTACGAAGAGCCAACGTTCCGCATG GAGTACTCGTCCCTTGCCACGCCGAACACCTGGCTCGACGTCAATCCGCAGGACCACTCT CGCACCGCTGTGAAAGTGCGCGAGGTCGGCGGTGGCTTCGACGCCGCCAACTACAAGGTG GAGCGCCGCTTCGCTACCGCACCAGACCAGACCAAGATCCCGCTCTCAGTTGTCTACCAC AAAGACCTCGACATGAGCCAGCCGCAGCCGTGCATGCTGTACGGGTACGGCAGCTACGGC CTTAGCATGGACCCTCAGTTCAGCATTCAGCACCTGCCGTACTGTGACCGCGGCATGATC TTCGCCATAGCCCACATCCGCGGCGGCAGTGAGATGGGCCGTGCATGGTACGAGATCGGC GCCAAGTACCTCACGAAGCGCAACACCTTTTCCGACTTCATCGCGGCAGCCGAGTTCCTG GTGAACGCGAAATTGACGACGCCGTCGCAGCTGGCCTGCGAGGGGCGTAGCGCCGGCGGC CTGCTGGTGGGCGCCGTGCTGAACATGCGTCCCGATCTCTTCAAGGTGGCGCTCGCCGGC GTGCCGTTCGTGGATGTCATGACGACCATGTGCGACCCCAGCATTCCCTTGACGACGGGC GAGTGGGAGGAGTGGGGCAACCCGAACGAGTACAAGTACTACGACTACATGCTGAGCTAC AGCCCCATGGACAACGTCCGCGCGCAGGAGTACCCGAATATCATGGTCCAGTGCGGCCTG CACGACCCCCGCGTCGCTTATTGGGAGCCGGCCAAGTGGGTGAGCAAGCTGCGTGAGTGC AAGACGGACAACAACGAAATTCTGCTGAACATGGACATGGAGAGCGGGCACTTCTCCGCC AAGGATCGCTACAAGTTCTGGAAGGAGTCGGCTATCCAGCAAGCGTTCGTGTGCAAGCAC CTGAAGAGCACCGTGCGCCTGCTGGTTCGCAGGTAA
  • Download Fasta

  • Fasta :-

    MLSGNTIAASAQPPIAAKKPHRVTFGYVEGEDRGPNPMNPPRYREDPYFWMRDDNRKDPA VIEHLNKEKAYFQARSADIAQLRDDIYTEHISHIKEDDMSAPYVYGKYRYYTREVKGKSY KIYCRVSKDKEPGDVAAEEVIIDVNQVAEGKPFCDVMEVKPAPPEHDLVAFSVDMSGNEV YTIEFKRISDPCQTIADKVSGTNGEIVWGPDQTSLFYVTKDETLRDNKVWRHVMGKPQSE DVCLYEENNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRRGNAHNTLEIVRPREKG VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNY LVVTGRRAGLTRIWTMMVDPQDGVFKASTGLREVVMEEPIFTVHLVAFQMLEYEEPTFRM EYSSLATPNTWLDVNPQDHSRTAVKVREVGGGFDAANYKVERRFATAPDQTKIPLSVVYH KDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSEMGRAWYEIG AKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLVGAVLNMRPDLFKVALAG VPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGL HDPRVAYWEPAKWVSKLRECKTDNNEILLNMDMESGHFSAKDRYKFWKESAIQQAFVCKH LKSTVRLLVRR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_090820.1699 SSGHFSAKDR0.992unspLdBPK_090820.1699 SSGHFSAKDR0.992unspLdBPK_090820.1699 SSGHFSAKDR0.992unspLdBPK_090820.1127 SYCRVSKDKE0.99unspLdBPK_090820.1641 SMLSYSPMDN0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India