LdBPK_100510.1 | GP63, leishmanolysin (fragment)

UniProt_ID: E9BA96

Computed_GO_Component_IDs: GO:0016020
Computed_GO_Components: membrane
Computed_GO_Function_IDs: GO:0004222
Computed_GO_Functions: metalloendopeptidase activity
Computed_GO_Process_IDs: GO:0007155 GO:0006508
Computed_GO_Processes: cell adhesion proteolysis
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	LdBPK_100510.1	OTHER	0.880364	0.098689	0.020947

No Results

Fasta :-
>LdBPK_100510.1 MSVDSSSTHRHRSVAARLVRLAAAGAAVIAAVGTAAAWAHAGAVQHRCIHDAMQARVRQS VARHHTAPGAVSAVGLPYVTLDTAA
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_100510.1.fa Sequence name : LdBPK_100510 Sequence length : 85 VALUES OF COMPUTED PARAMETERS Coef20 : 4.975 CoefTot : 0.548 ChDiff : 5 ZoneTo : 82 KR : 8 DE : 3 CleavSite : 65 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.782 1.953 0.350 0.695 MesoH : -0.343 0.479 -0.298 0.192 MuHd_075 : 35.938 24.542 11.624 6.975 MuHd_095 : 38.995 21.221 9.556 8.053 MuHd_100 : 30.154 17.716 8.461 7.594 MuHd_105 : 30.552 19.125 8.137 7.986 Hmax_075 : 16.683 18.083 5.392 5.448 Hmax_095 : 6.300 11.300 1.033 3.260 Hmax_100 : 9.000 21.900 0.889 3.960 Hmax_105 : 9.600 20.738 -0.453 6.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6100 0.3900 DFMC : 0.2876 0.7124 This protein is probably imported in mitochondria. f(Ser) = 0.0854 f(Arg) = 0.0976 CMi = 0.41322 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 85 LdBPK_100510.1 MSVDSSSTHRHRSVAARLVRLAAAGAAVIAAVGTAAAWAHAGAVQHRCIHDAMQARVRQSVARHHTAPGAVSAVGLPYVT 80 LDTAA 160 ................................................................................ 80 ..... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_100510.1 10 DSSSTHR|HR 0.110 . LdBPK_100510.1 12 SSTHRHR|SV 0.237 . LdBPK_100510.1 17 HRSVAAR|LV 0.211 . LdBPK_100510.1 20 VAARLVR|LA 0.283 . LdBPK_100510.1 47 AGAVQHR|CI 0.166 . LdBPK_100510.1 56 HDAMQAR|VR 0.098 . LdBPK_100510.1 58 AMQARVR|QS 0.095 . LdBPK_100510.1 63 VRQSVAR|HH 0.133 . ____________________________^_________________

Fasta :-
>LdBPK_100510.1 ATGTCCGTCGACAGCAGCAGCACGCACCGGCACCGCAGCGTCGCCGCGCGCCTGGTGCGC CTCGCGGCTGCCGGCGCCGCAGTCATCGCTGCTGTCGGCACCGCGGCCGCGTGGGCACAC GCCGGTGCGGTGCAGCACCGCTGCATCCACGACGCGATGCAGGCACGCGTGCGGCAGTCG GTGGCGCGCCACCACACGGCCCCCGGCGCCGTGTCCGCGGTGGGCCTGCCGTACGTTACT CTCGACACCGCGGCC
Download Fasta

Fasta :-

MSVDSSSTHRHRSVAARLVRLAAAGAAVIAAVGTAAAWAHAGAVQHRCIHDAMQARVRQS VARHHTAPGAVSAVGLPYVTLDTAA

No Results

	ID	Site	Peptide	Score	Method
	LdBPK_100510.1	7 S	VDSSSTHRH	0.994	unsp

LdBPK_100510.1 | GP63, leishmanolysin (fragment)

ID's

UniProt_ID: E9BA96

GEO Functions

Computed_GO_Component_IDs: GO:0016020

Computed_GO_Components: membrane

Computed_GO_Function_IDs: GO:0004222

Computed_GO_Functions: metalloendopeptidase activity

Computed_GO_Process_IDs: GO:0007155 GO:0006508

Computed_GO_Processes: cell adhesion proteolysis

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India