LdBPK_100520.1 | GP63, leishmanolysin

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_100520.1OTHER0.6756830.3235830.000735
No Results

  • Fasta :-

    >LdBPK_100520.1 MKTAGTQRVSAAAAVALEHTRARARKPIGHITVCLCVCPCTGIPPSQRRGCCRLTEPHTH LPPTQLHIPSVSRPFSCSTLHTHSGA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_100520.1.fa Sequence name : LdBPK_100520 Sequence length : 86 VALUES OF COMPUTED PARAMETERS Coef20 : 4.353 CoefTot : -2.495 ChDiff : 8 ZoneTo : 83 KR : 10 DE : 2 CleavSite : 83 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.547 1.594 0.545 0.551 MesoH : -0.700 -0.007 -0.304 0.023 MuHd_075 : 35.561 16.972 9.489 6.415 MuHd_095 : 34.816 19.501 9.091 7.298 MuHd_100 : 31.506 17.538 8.541 6.249 MuHd_105 : 31.207 17.686 7.834 5.647 Hmax_075 : 8.600 14.233 5.456 3.000 Hmax_095 : 3.675 8.700 3.469 2.550 Hmax_100 : 8.800 7.800 3.101 2.830 Hmax_105 : 11.600 15.167 1.300 5.682 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8566 0.1434 DFMC : 0.6861 0.3139
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 86 LdBPK_100520.1 MKTAGTQRVSAAAAVALEHTRARARKPIGHITVCLCVCPCTGIPPSQRRGCCRLTEPHTHLPPTQLHIPSVSRPFSCSTL 80 HTHSGA 160 .........................P...................................................... 80 ...... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_100520.1 2 -----MK|TA 0.099 . LdBPK_100520.1 8 KTAGTQR|VS 0.085 . LdBPK_100520.1 21 VALEHTR|AR 0.076 . LdBPK_100520.1 23 LEHTRAR|AR 0.126 . LdBPK_100520.1 25 HTRARAR|KP 0.093 . LdBPK_100520.1 26 TRARARK|PI 0.623 *ProP* LdBPK_100520.1 48 GIPPSQR|RG 0.074 . LdBPK_100520.1 49 IPPSQRR|GC 0.153 . LdBPK_100520.1 53 QRRGCCR|LT 0.148 . LdBPK_100520.1 73 HIPSVSR|PF 0.088 . ____________________________^_________________

  • Fasta :-

    >LdBPK_100520.1 ATGAAGACAGCCGGCACACAGCGTGTGTCGGCGGCTGCAGCAGTGGCGCTGGAACACACG CGGGCACGTGCACGCAAGCCGATCGGACACATCACTGTCTGTCTTTGTGTCTGCCCATGT ACGGGCATCCCCCCTTCACAGCGTCGGGGTTGTTGCAGGCTCACAGAGCCTCACACCCAT CTTCCGCCCACCCAGCTGCACATCCCCTCTGTCTCTCGCCCCTTTTCCTGCTCGACCCTC CACACTCACTCTGGCGCCTAG
  • Download Fasta

  • Fasta :-

    MKTAGTQRVSAAAAVALEHTRARARKPIGHITVCLCVCPCTGIPPSQRRGCCRLTEPHTH LPPTQLHIPSVSRPFSCSTLHTHSGA

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IDSitePeptideScoreMethod
LdBPK_100520.146 SGIPPSQRRG0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India