LdBPK_120920.1 | Alpha/beta hydrolase domain-containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_120920.1OTHER0.9594060.0041780.036416
No Results

  • Fasta :-

    >LdBPK_120920.1 MVVMASRLDAFVKSIIFPRPKIATYDTSTHPNKLVHIPLVDPHRHVENGAFTYGYLLANP KATHVLLYAHPNAVDIGMAYKELRYVSKEASISVLLFEYSGYGLTHTPITEASIHQDTLS AYLFLRRYFGVPSNRVILCGRSLGASPAAFLAAFLPPQQRPCLLILQCPFTALSECINEF SQNAVSIANFLGYNWFRTIDIITDVSCPVVLHHGTNDTTVRIDHSYTLQRARDTAAKPCV TYLYREDGKGHNNLSSATLVRILRERVVTEALLPLLLPHTKLFLANAPVYARLFCDDSGM GFATLSDAVASWLAKLSLHICAPPLDQLYVLLTASVCAFTMECARAWQIYCALIRKNLCG DAAHERCTKDVFLHRCLACWGSPLAVHVAVERVQSTKEVRCFGFATCRDAMLDAPAMYPA KSPEALLTVLEIGVTPGLLSCMKRCLNTAPDMLEEHAMPCFVQQDTVSAVQLECERSVAF LTEDDKQRLCALLKDMDAGFSDNLSSKAYERLRRSPSTSPQMSAESFEELKEWLRPWTST RGTDMHALAQEVPWDDYLLRSRSVARQHVLNESMSWEECCQAMEESDVVSKIYTLFQEMS AQYLRPTFHPHPTASVESRA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_120920.1.fa Sequence name : LdBPK_120920 Sequence length : 620 VALUES OF COMPUTED PARAMETERS Coef20 : 4.602 CoefTot : -1.201 ChDiff : -6 ZoneTo : 40 KR : 5 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.659 0.305 0.594 MesoH : 0.338 0.896 -0.083 0.374 MuHd_075 : 22.063 17.818 6.784 5.908 MuHd_095 : 21.883 18.925 7.416 4.560 MuHd_100 : 25.814 18.138 6.971 4.610 MuHd_105 : 27.284 18.021 7.500 5.201 Hmax_075 : 11.800 19.833 3.778 5.600 Hmax_095 : 9.000 17.100 1.680 2.960 Hmax_100 : 9.000 18.800 0.543 6.900 Hmax_105 : 4.200 20.000 -2.235 6.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9669 0.0331 DFMC : 0.9603 0.0397
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 620 LdBPK_120920.1 MVVMASRLDAFVKSIIFPRPKIATYDTSTHPNKLVHIPLVDPHRHVENGAFTYGYLLANPKATHVLLYAHPNAVDIGMAY 80 KELRYVSKEASISVLLFEYSGYGLTHTPITEASIHQDTLSAYLFLRRYFGVPSNRVILCGRSLGASPAAFLAAFLPPQQR 160 PCLLILQCPFTALSECINEFSQNAVSIANFLGYNWFRTIDIITDVSCPVVLHHGTNDTTVRIDHSYTLQRARDTAAKPCV 240 TYLYREDGKGHNNLSSATLVRILRERVVTEALLPLLLPHTKLFLANAPVYARLFCDDSGMGFATLSDAVASWLAKLSLHI 320 CAPPLDQLYVLLTASVCAFTMECARAWQIYCALIRKNLCGDAAHERCTKDVFLHRCLACWGSPLAVHVAVERVQSTKEVR 400 CFGFATCRDAMLDAPAMYPAKSPEALLTVLEIGVTPGLLSCMKRCLNTAPDMLEEHAMPCFVQQDTVSAVQLECERSVAF 480 LTEDDKQRLCALLKDMDAGFSDNLSSKAYERLRRSPSTSPQMSAESFEELKEWLRPWTSTRGTDMHALAQEVPWDDYLLR 560 SRSVARQHVLNESMSWEECCQAMEESDVVSKIYTLFQEMSAQYLRPTFHPHPTASVESRA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................P.............................................. 560 ............................................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_120920.1 7 MVVMASR|LD 0.069 . LdBPK_120920.1 13 RLDAFVK|SI 0.084 . LdBPK_120920.1 19 KSIIFPR|PK 0.108 . LdBPK_120920.1 21 IIFPRPK|IA 0.068 . LdBPK_120920.1 33 TSTHPNK|LV 0.086 . LdBPK_120920.1 44 PLVDPHR|HV 0.159 . LdBPK_120920.1 61 YLLANPK|AT 0.065 . LdBPK_120920.1 81 DIGMAYK|EL 0.063 . LdBPK_120920.1 84 MAYKELR|YV 0.193 . LdBPK_120920.1 88 ELRYVSK|EA 0.085 . LdBPK_120920.1 126 SAYLFLR|RY 0.100 . LdBPK_120920.1 127 AYLFLRR|YF 0.103 . LdBPK_120920.1 135 FGVPSNR|VI 0.081 . LdBPK_120920.1 141 RVILCGR|SL 0.181 . LdBPK_120920.1 160 FLPPQQR|PC 0.076 . LdBPK_120920.1 197 LGYNWFR|TI 0.118 . LdBPK_120920.1 221 TNDTTVR|ID 0.090 . LdBPK_120920.1 230 HSYTLQR|AR 0.094 . LdBPK_120920.1 232 YTLQRAR|DT 0.116 . LdBPK_120920.1 237 ARDTAAK|PC 0.066 . LdBPK_120920.1 245 CVTYLYR|ED 0.095 . LdBPK_120920.1 249 LYREDGK|GH 0.059 . LdBPK_120920.1 261 SSATLVR|IL 0.111 . LdBPK_120920.1 264 TLVRILR|ER 0.150 . LdBPK_120920.1 266 VRILRER|VV 0.120 . LdBPK_120920.1 281 LLLPHTK|LF 0.058 . LdBPK_120920.1 292 NAPVYAR|LF 0.080 . LdBPK_120920.1 315 VASWLAK|LS 0.062 . LdBPK_120920.1 345 FTMECAR|AW 0.084 . LdBPK_120920.1 355 IYCALIR|KN 0.075 . LdBPK_120920.1 356 YCALIRK|NL 0.075 . LdBPK_120920.1 366 GDAAHER|CT 0.122 . LdBPK_120920.1 369 AHERCTK|DV 0.171 . LdBPK_120920.1 375 KDVFLHR|CL 0.082 . LdBPK_120920.1 392 VHVAVER|VQ 0.084 . LdBPK_120920.1 397 ERVQSTK|EV 0.086 . LdBPK_120920.1 400 QSTKEVR|CF 0.095 . LdBPK_120920.1 408 FGFATCR|DA 0.096 . LdBPK_120920.1 421 PAMYPAK|SP 0.097 . LdBPK_120920.1 443 GLLSCMK|RC 0.055 . LdBPK_120920.1 444 LLSCMKR|CL 0.350 . LdBPK_120920.1 476 VQLECER|SV 0.095 . LdBPK_120920.1 486 FLTEDDK|QR 0.052 . LdBPK_120920.1 488 TEDDKQR|LC 0.082 . LdBPK_120920.1 494 RLCALLK|DM 0.080 . LdBPK_120920.1 507 SDNLSSK|AY 0.079 . LdBPK_120920.1 511 SSKAYER|LR 0.070 . LdBPK_120920.1 513 KAYERLR|RS 0.071 . LdBPK_120920.1 514 AYERLRR|SP 0.631 *ProP* LdBPK_120920.1 531 ESFEELK|EW 0.054 . LdBPK_120920.1 535 ELKEWLR|PW 0.075 . LdBPK_120920.1 541 RPWTSTR|GT 0.132 . LdBPK_120920.1 560 WDDYLLR|SR 0.140 . LdBPK_120920.1 562 DYLLRSR|SV 0.116 . LdBPK_120920.1 566 RSRSVAR|QH 0.112 . LdBPK_120920.1 591 ESDVVSK|IY 0.062 . LdBPK_120920.1 605 MSAQYLR|PT 0.096 . LdBPK_120920.1 619 TASVESR|A- 0.162 . ____________________________^_________________

  • Fasta :-

    >LdBPK_120920.1 ATGGTAGTCATGGCCAGCCGTCTAGACGCCTTCGTTAAATCCATCATTTTCCCTCGCCCT AAAATTGCCACCTACGACACCTCCACTCATCCCAACAAGCTCGTGCACATCCCTCTCGTC GACCCACACCGACATGTCGAAAACGGTGCGTTCACCTACGGCTACCTGCTGGCAAACCCC AAGGCAACTCATGTGCTCTTGTACGCCCACCCCAATGCCGTGGACATCGGCATGGCCTAC AAGGAGCTCCGCTACGTGAGCAAAGAGGCGTCCATCAGCGTGCTACTGTTCGAGTACTCG GGCTATGGGCTCACCCACACCCCCATAACAGAAGCAAGTATTCACCAAGACACGCTTTCC GCCTACCTCTTCCTGCGCCGCTACTTTGGGGTGCCATCGAACCGCGTAATTCTCTGTGGC CGCTCTCTCGGGGCCTCGCCCGCCGCATTTCTGGCTGCTTTTCTTCCACCACAGCAGCGG CCATGCCTACTTATTCTCCAATGCCCCTTCACCGCGCTTAGCGAGTGCATCAACGAGTTC TCGCAGAACGCCGTGTCCATCGCGAACTTTCTAGGGTACAACTGGTTTCGAACGATTGAC ATCATCACAGACGTGAGTTGCCCGGTCGTGCTTCATCACGGCACTAACGATACCACTGTG AGGATCGATCACTCCTACACTCTGCAGCGGGCCCGCGACACCGCTGCGAAACCGTGCGTC ACCTACCTGTACCGAGAGGACGGCAAAGGCCACAACAACCTCAGCTCCGCCACTTTGGTG CGGATACTTCGAGAGCGTGTCGTAACGGAGGCTCTGCTGCCGCTGCTACTGCCCCACACG AAGCTGTTCTTGGCGAACGCGCCCGTCTACGCGCGGCTTTTCTGCGACGATAGCGGAATG GGATTCGCCACGCTGAGCGACGCCGTAGCATCCTGGTTGGCGAAGTTGTCCCTCCACATT TGCGCACCGCCGCTCGATCAGCTGTATGTCCTGCTGACCGCAAGCGTCTGCGCCTTCACG ATGGAGTGCGCGCGAGCGTGGCAGATTTACTGCGCGCTCATCAGGAAGAACTTGTGTGGC GACGCGGCACACGAACGGTGCACCAAGGACGTGTTTCTTCATCGGTGCCTGGCGTGCTGG GGGAGCCCCCTCGCTGTCCACGTCGCTGTCGAGCGCGTACAGTCAACGAAAGAGGTCCGC TGCTTCGGCTTCGCCACCTGCCGGGACGCGATGCTGGACGCACCGGCTATGTACCCGGCA AAGTCCCCTGAGGCGCTGCTAACTGTGCTGGAAATCGGTGTCACGCCAGGGCTGCTGTCC TGCATGAAGCGGTGCCTCAACACCGCTCCCGACATGCTGGAAGAGCATGCGATGCCATGC TTTGTGCAGCAAGACACAGTTAGCGCGGTGCAGCTGGAGTGTGAGCGTTCTGTGGCGTTT CTGACCGAGGACGACAAGCAGCGTCTGTGTGCCTTGCTAAAGGACATGGACGCCGGCTTT AGCGACAATTTGTCCAGCAAGGCTTATGAGCGGCTGCGGCGCTCACCTTCCACGTCTCCC CAAATGAGCGCAGAGTCGTTCGAAGAGCTGAAGGAGTGGCTGCGGCCGTGGACCTCCACA CGCGGAACAGACATGCATGCACTGGCTCAGGAGGTACCGTGGGACGACTATCTGCTGCGT AGTCGGTCCGTTGCTCGGCAGCACGTGCTGAATGAGAGCATGAGCTGGGAGGAGTGCTGC CAGGCAATGGAGGAGAGCGATGTGGTTTCCAAAATATACACTCTCTTTCAGGAAATGTCA GCACAGTACCTGCGGCCTACCTTTCACCCTCACCCCACAGCGTCCGTGGAGTCCCGTGCG TAA
  • Download Fasta

  • Fasta :-

    MVVMASRLDAFVKSIIFPRPKIATYDTSTHPNKLVHIPLVDPHRHVENGAFTYGYLLANP KATHVLLYAHPNAVDIGMAYKELRYVSKEASISVLLFEYSGYGLTHTPITEASIHQDTLS AYLFLRRYFGVPSNRVILCGRSLGASPAAFLAAFLPPQQRPCLLILQCPFTALSECINEF SQNAVSIANFLGYNWFRTIDIITDVSCPVVLHHGTNDTTVRIDHSYTLQRARDTAAKPCV TYLYREDGKGHNNLSSATLVRILRERVVTEALLPLLLPHTKLFLANAPVYARLFCDDSGM GFATLSDAVASWLAKLSLHICAPPLDQLYVLLTASVCAFTMECARAWQIYCALIRKNLCG DAAHERCTKDVFLHRCLACWGSPLAVHVAVERVQSTKEVRCFGFATCRDAMLDAPAMYPA KSPEALLTVLEIGVTPGLLSCMKRCLNTAPDMLEEHAMPCFVQQDTVSAVQLECERSVAF LTEDDKQRLCALLKDMDAGFSDNLSSKAYERLRRSPSTSPQMSAESFEELKEWLRPWTST RGTDMHALAQEVPWDDYLLRSRSVARQHVLNESMSWEECCQAMEESDVVSKIYTLFQEMS AQYLRPTFHPHPTASVESRA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_120920.1422 SYPAKSPEAL0.996unspLdBPK_120920.1422 SYPAKSPEAL0.996unspLdBPK_120920.1422 SYPAKSPEAL0.996unspLdBPK_120920.1515 SRLRRSPSTS0.996unspLdBPK_120920.1519 SSPSTSPQMS0.99unspLdBPK_120920.1523 SSPQMSAESF0.995unspLdBPK_120920.1526 SMSAESFEEL0.995unspLdBPK_120920.1575 SNESMSWEEC0.995unspLdBPK_120920.187 SLRYVSKEAS0.994unspLdBPK_120920.1395 SERVQSTKEV0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India