LdBPK_140180.1 | carboxypeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004181      

  • Computed_GO_Functions:  metallocarboxypeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_140180.1OTHER0.9968420.0001330.003025
No Results

  • Fasta :-

    >LdBPK_140180.1 MQAYEELKQLHRKLHNLRHLLALGEWDMHTMMPPKGATARANALAELEAHLHQLHTAPRV ALLLKEALLVKDELAEVDRANLREMVRLHELASQLPEELLRRRTRLTTLAQQLWVKCRAE NDIAAWLPTLQELVDLEREEGRLRAGTSGKSPYDALLGANEPGMTVAKLDAIYADIKSWL PALYKEVLENRKDMGASLTELQTPISKEKQIALGRQLMTDVWKYDWGAGRYDEAPHPFGG MVKEDVRMTYYWSPANYTKCLLATIHETGHAKYEQNCGPRELLGQPVCEARSGGIHETQS LLAERMIAKSAAFAEYLTPLLELHLGAQPGLTVENVRKINQLVKPSYIRTLADEVGYSLH VILRYEIERDLIEGRLEAVDVPRVWEEKMKEYMGLETLGRDDLGCLQDIHWAAGYWGSFP AYTIGAIGAAQLMAAIRQQLGDDVVTQCIRTGHIDPILAKQKEMIWDLGCLLETDELLIK ATGEPLNPRHLREHLERRYLRNED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_140180.1.fa Sequence name : LdBPK_140180 Sequence length : 504 VALUES OF COMPUTED PARAMETERS Coef20 : 3.449 CoefTot : -0.171 ChDiff : -13 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.406 1.300 0.168 0.594 MesoH : -0.502 0.322 -0.335 0.253 MuHd_075 : 17.078 3.037 2.531 4.251 MuHd_095 : 20.789 17.607 6.695 5.055 MuHd_100 : 31.463 25.675 10.182 7.564 MuHd_105 : 42.699 31.566 12.926 9.923 Hmax_075 : -7.350 -0.817 -5.907 1.120 Hmax_095 : -8.300 4.813 -3.715 0.814 Hmax_100 : -2.500 9.600 -2.179 2.780 Hmax_105 : 14.117 18.317 2.769 6.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8483 0.1517 DFMC : 0.9114 0.0886
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 504 LdBPK_140180.1 MQAYEELKQLHRKLHNLRHLLALGEWDMHTMMPPKGATARANALAELEAHLHQLHTAPRVALLLKEALLVKDELAEVDRA 80 NLREMVRLHELASQLPEELLRRRTRLTTLAQQLWVKCRAENDIAAWLPTLQELVDLEREEGRLRAGTSGKSPYDALLGAN 160 EPGMTVAKLDAIYADIKSWLPALYKEVLENRKDMGASLTELQTPISKEKQIALGRQLMTDVWKYDWGAGRYDEAPHPFGG 240 MVKEDVRMTYYWSPANYTKCLLATIHETGHAKYEQNCGPRELLGQPVCEARSGGIHETQSLLAERMIAKSAAFAEYLTPL 320 LELHLGAQPGLTVENVRKINQLVKPSYIRTLADEVGYSLHVILRYEIERDLIEGRLEAVDVPRVWEEKMKEYMGLETLGR 400 DDLGCLQDIHWAAGYWGSFPAYTIGAIGAAQLMAAIRQQLGDDVVTQCIRTGHIDPILAKQKEMIWDLGCLLETDELLIK 480 ATGEPLNPRHLREHLERRYLRNED 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_140180.1 8 QAYEELK|QL 0.074 . LdBPK_140180.1 12 ELKQLHR|KL 0.080 . LdBPK_140180.1 13 LKQLHRK|LH 0.069 . LdBPK_140180.1 18 RKLHNLR|HL 0.091 . LdBPK_140180.1 35 HTMMPPK|GA 0.080 . LdBPK_140180.1 40 PKGATAR|AN 0.107 . LdBPK_140180.1 59 QLHTAPR|VA 0.083 . LdBPK_140180.1 65 RVALLLK|EA 0.062 . LdBPK_140180.1 71 KEALLVK|DE 0.062 . LdBPK_140180.1 79 ELAEVDR|AN 0.082 . LdBPK_140180.1 83 VDRANLR|EM 0.067 . LdBPK_140180.1 87 NLREMVR|LH 0.071 . LdBPK_140180.1 101 LPEELLR|RR 0.067 . LdBPK_140180.1 102 PEELLRR|RT 0.085 . LdBPK_140180.1 103 EELLRRR|TR 0.087 . LdBPK_140180.1 105 LLRRRTR|LT 0.275 . LdBPK_140180.1 116 AQQLWVK|CR 0.057 . LdBPK_140180.1 118 QLWVKCR|AE 0.119 . LdBPK_140180.1 138 ELVDLER|EE 0.077 . LdBPK_140180.1 142 LEREEGR|LR 0.071 . LdBPK_140180.1 144 REEGRLR|AG 0.071 . LdBPK_140180.1 150 RAGTSGK|SP 0.101 . LdBPK_140180.1 168 PGMTVAK|LD 0.060 . LdBPK_140180.1 177 AIYADIK|SW 0.075 . LdBPK_140180.1 185 WLPALYK|EV 0.068 . LdBPK_140180.1 191 KEVLENR|KD 0.077 . LdBPK_140180.1 192 EVLENRK|DM 0.103 . LdBPK_140180.1 207 LQTPISK|EK 0.058 . LdBPK_140180.1 209 TPISKEK|QI 0.079 . LdBPK_140180.1 215 KQIALGR|QL 0.083 . LdBPK_140180.1 223 LMTDVWK|YD 0.070 . LdBPK_140180.1 230 YDWGAGR|YD 0.093 . LdBPK_140180.1 243 PFGGMVK|ED 0.054 . LdBPK_140180.1 247 MVKEDVR|MT 0.076 . LdBPK_140180.1 259 SPANYTK|CL 0.074 . LdBPK_140180.1 272 HETGHAK|YE 0.069 . LdBPK_140180.1 280 EQNCGPR|EL 0.092 . LdBPK_140180.1 291 QPVCEAR|SG 0.233 . LdBPK_140180.1 305 QSLLAER|MI 0.087 . LdBPK_140180.1 309 AERMIAK|SA 0.102 . LdBPK_140180.1 337 LTVENVR|KI 0.085 . LdBPK_140180.1 338 TVENVRK|IN 0.088 . LdBPK_140180.1 344 KINQLVK|PS 0.061 . LdBPK_140180.1 349 VKPSYIR|TL 0.080 . LdBPK_140180.1 364 SLHVILR|YE 0.086 . LdBPK_140180.1 369 LRYEIER|DL 0.126 . LdBPK_140180.1 375 RDLIEGR|LE 0.070 . LdBPK_140180.1 383 EAVDVPR|VW 0.104 . LdBPK_140180.1 388 PRVWEEK|MK 0.071 . LdBPK_140180.1 390 VWEEKMK|EY 0.071 . LdBPK_140180.1 400 GLETLGR|DD 0.105 . LdBPK_140180.1 437 QLMAAIR|QQ 0.076 . LdBPK_140180.1 450 VVTQCIR|TG 0.064 . LdBPK_140180.1 460 IDPILAK|QK 0.067 . LdBPK_140180.1 462 PILAKQK|EM 0.063 . LdBPK_140180.1 480 TDELLIK|AT 0.066 . LdBPK_140180.1 489 GEPLNPR|HL 0.090 . LdBPK_140180.1 492 LNPRHLR|EH 0.176 . LdBPK_140180.1 497 LREHLER|RY 0.103 . LdBPK_140180.1 498 REHLERR|YL 0.178 . LdBPK_140180.1 501 LERRYLR|NE 0.249 . ____________________________^_________________

  • Fasta :-

    >LdBPK_140180.1 ATGCAGGCGTACGAAGAGCTGAAGCAGCTGCATCGAAAGCTGCACAACCTTCGGCACCTT CTTGCCCTAGGTGAGTGGGACATGCATACCATGATGCCGCCGAAGGGCGCAACGGCTCGC GCGAACGCGCTTGCGGAGCTGGAGGCACACTTGCACCAGCTTCACACAGCGCCACGCGTT GCGCTCCTTTTGAAGGAGGCGCTGCTGGTTAAGGACGAACTCGCCGAGGTGGACCGCGCG AACCTCCGCGAAATGGTGCGCCTGCACGAGCTTGCGTCGCAGCTGCCGGAGGAGCTGCTG CGGCGCAGGACGCGGCTGACAACGCTGGCGCAGCAGCTGTGGGTAAAATGCCGCGCGGAA AACGACATTGCTGCGTGGCTGCCGACGCTGCAGGAGCTGGTGGACCTCGAGCGCGAGGAG GGCCGCCTTCGAGCCGGCACAAGCGGGAAGTCCCCGTACGACGCGCTGCTCGGCGCCAAC GAGCCCGGGATGACGGTTGCGAAGCTGGACGCAATCTACGCGGACATCAAGTCTTGGCTG CCGGCGCTGTACAAGGAGGTGCTGGAGAACCGAAAGGACATGGGCGCGAGCCTCACTGAG CTGCAGACGCCGATCTCGAAGGAAAAGCAGATTGCGCTTGGCCGGCAGCTGATGACGGAC GTGTGGAAGTACGACTGGGGCGCGGGTCGCTACGACGAGGCGCCGCACCCGTTTGGTGGG ATGGTGAAGGAGGACGTGCGGATGACGTACTACTGGTCGCCGGCCAACTACACCAAGTGC CTGCTGGCGACGATCCACGAGACAGGACACGCCAAATACGAGCAGAACTGCGGGCCGCGC GAGCTGCTTGGGCAGCCGGTGTGCGAGGCGCGATCCGGCGGCATCCACGAGACGCAGTCG CTGCTGGCGGAGAGGATGATAGCCAAGTCCGCTGCGTTCGCCGAGTACCTGACGCCGCTG CTGGAGCTGCACCTTGGCGCGCAGCCAGGGCTGACGGTGGAGAACGTGCGCAAGATCAAC CAGCTGGTGAAGCCGAGCTACATCCGGACGCTTGCAGACGAGGTGGGTTACTCTCTCCAC GTGATCCTGCGCTACGAGATCGAGCGCGACCTGATCGAGGGGCGCCTGGAGGCGGTGGAC GTGCCGCGGGTGTGGGAGGAAAAGATGAAGGAGTACATGGGCCTGGAGACGCTTGGGCGC GACGACCTCGGGTGCCTACAGGACATTCACTGGGCTGCCGGGTATTGGGGGAGTTTTCCC GCCTACACGATCGGCGCCATCGGCGCTGCGCAGCTGATGGCGGCCATCCGCCAGCAGCTG GGTGACGACGTCGTGACGCAGTGCATCCGCACGGGCCACATCGACCCCATCTTGGCCAAG CAGAAGGAGATGATCTGGGACCTGGGCTGCCTGCTCGAGACGGACGAGCTGCTTATCAAG GCAACCGGCGAGCCGCTGAACCCGCGCCACCTGCGCGAGCACCTGGAGCGCCGCTACCTG CGCAATGAGGACTGA
  • Download Fasta

  • Fasta :-

    MQAYEELKQLHRKLHNLRHLLALGEWDMHTMMPPKGATARANALAELEAHLHQLHTAPRV ALLLKEALLVKDELAEVDRANLREMVRLHELASQLPEELLRRRTRLTTLAQQLWVKCRAE NDIAAWLPTLQELVDLEREEGRLRAGTSGKSPYDALLGANEPGMTVAKLDAIYADIKSWL PALYKEVLENRKDMGASLTELQTPISKEKQIALGRQLMTDVWKYDWGAGRYDEAPHPFGG MVKEDVRMTYYWSPANYTKCLLATIHETGHAKYEQNCGPRELLGQPVCEARSGGIHETQS LLAERMIAKSAAFAEYLTPLLELHLGAQPGLTVENVRKINQLVKPSYIRTLADEVGYSLH VILRYEIERDLIEGRLEAVDVPRVWEEKMKEYMGLETLGRDDLGCLQDIHWAAGYWGSFP AYTIGAIGAAQLMAAIRQQLGDDVVTQCIRTGHIDPILAKQKEMIWDLGCLLETDELLIK ATGEPLNPRHLREHLERRYLRNED

  • title: metal binding site
  • coordinates: H266,H270,E297
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_140180.1151 STSGKSPYDA0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India