LdBPK_161460.1 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_161460.1OTHER0.9949510.0007610.004289
No Results

  • Fasta :-

    >LdBPK_161460.1 MLNSLVDMPVPVTVRPLRMLGGGSSTSKDCKNGHPSPRGMQNGRSSPYMRNTHASARGTT GQAASAAMPLVADPLTNMKSTVIMSSPTPPPPRPTITIFADLEDDVGAGGLSFGKASRAT VSSVAAGGSCRRVEHDPLTFTQTLLSPHGYSSLCQHAKAEVAAESAFSSSSERAGIEAMR RKSGSLLPAGGDRSPERICSGSFRVFSPADSAELAAQTDSSLPSGLPNDISWFHRRTTTY PGSEDAEPHPLRISATPVVPIVPHVAEPSSRKRVAEDMQRLYGGAGAAAGSIAVCSAKEA SQASTSVATRDVSWSSGCTGNTTDASQSPRLAAKKDKKLSLLTPFTSSASKKPTKVEDKT PPSTAADRRQAHEQIIRVGVQRLYQRLNELRLVVYRVRNDGNCQFRAISHQLFGNEDYHD IIRSQIVSYMRAARARSFDYYFESPAHADAYYHNLAKPGSWGDELSLRAASDCLYVNIHV LSSEERNCYITYRPSSDYAASAPSFLVDVWKLRERRRAERRLLRAYGPQQQQQQQGHSSS NAFGDSRQASLYAGPQGIGSDDEGEMDANAIQLALHRRLQQSEIRCSLPLSATGSYNSGG GGGGFSLGAATMPLLQPQSTTKKPSQLLTPAAVPVPRLSSGNEGASDDGAANQVAKFRAV GAEVQSLDKATQAVNIFTQRKESANAYNTNDVAVCFPRKHNEDATRPPFAGTASLELSRS SSPHPQAQHHGLTMSGSTTEEAPVSGGTRRADTMTSFQALSPTMRQGDEAGEVMLLASSM HLSRTTQSLQRSFSCMQRASSVTGPADHFNGLNARSSAHAPSAGGGESGASSQLLGSLVP RAATTSFRLGADDDGSLPSGSDAGSGANQGVCCFSFEPRTEPIDIFLSYLYPVHYNSLSV KQEQEPAAGTVPTAEATATPSTPPPQPSGNVSAR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_161460.1.fa Sequence name : LdBPK_161460 Sequence length : 934 VALUES OF COMPUTED PARAMETERS Coef20 : 4.328 CoefTot : -4.061 ChDiff : 8 ZoneTo : 100 KR : 10 DE : 3 CleavSite : 59 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.606 1.253 0.338 0.566 MesoH : -0.106 0.199 -0.237 0.190 MuHd_075 : 27.089 14.186 7.761 4.568 MuHd_095 : 42.221 23.690 9.548 8.634 MuHd_100 : 35.330 21.043 8.995 7.742 MuHd_105 : 44.122 22.858 12.586 8.671 Hmax_075 : -4.638 -1.750 -0.725 4.970 Hmax_095 : 15.750 17.200 3.061 5.836 Hmax_100 : 14.600 15.000 -0.854 4.820 Hmax_105 : 11.900 8.517 3.082 3.395 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2995 0.7005 DFMC : 0.3137 0.6863 This protein is probably imported in mitochondria. f(Ser) = 0.1200 f(Arg) = 0.0700 CMi = 0.71429 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 934 LdBPK_161460.1 MLNSLVDMPVPVTVRPLRMLGGGSSTSKDCKNGHPSPRGMQNGRSSPYMRNTHASARGTTGQAASAAMPLVADPLTNMKS 80 TVIMSSPTPPPPRPTITIFADLEDDVGAGGLSFGKASRATVSSVAAGGSCRRVEHDPLTFTQTLLSPHGYSSLCQHAKAE 160 VAAESAFSSSSERAGIEAMRRKSGSLLPAGGDRSPERICSGSFRVFSPADSAELAAQTDSSLPSGLPNDISWFHRRTTTY 240 PGSEDAEPHPLRISATPVVPIVPHVAEPSSRKRVAEDMQRLYGGAGAAAGSIAVCSAKEASQASTSVATRDVSWSSGCTG 320 NTTDASQSPRLAAKKDKKLSLLTPFTSSASKKPTKVEDKTPPSTAADRRQAHEQIIRVGVQRLYQRLNELRLVVYRVRND 400 GNCQFRAISHQLFGNEDYHDIIRSQIVSYMRAARARSFDYYFESPAHADAYYHNLAKPGSWGDELSLRAASDCLYVNIHV 480 LSSEERNCYITYRPSSDYAASAPSFLVDVWKLRERRRAERRLLRAYGPQQQQQQQGHSSSNAFGDSRQASLYAGPQGIGS 560 DDEGEMDANAIQLALHRRLQQSEIRCSLPLSATGSYNSGGGGGGFSLGAATMPLLQPQSTTKKPSQLLTPAAVPVPRLSS 640 GNEGASDDGAANQVAKFRAVGAEVQSLDKATQAVNIFTQRKESANAYNTNDVAVCFPRKHNEDATRPPFAGTASLELSRS 720 SSPHPQAQHHGLTMSGSTTEEAPVSGGTRRADTMTSFQALSPTMRQGDEAGEVMLLASSMHLSRTTQSLQRSFSCMQRAS 800 SVTGPADHFNGLNARSSAHAPSAGGGESGASSQLLGSLVPRAATTSFRLGADDDGSLPSGSDAGSGANQGVCCFSFEPRT 880 EPIDIFLSYLYPVHYNSLSVKQEQEPAAGTVPTAEATATPSTPPPQPSGNVSAR 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ...................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_161460.1 15 PVPVTVR|PL 0.080 . LdBPK_161460.1 18 VTVRPLR|ML 0.359 . LdBPK_161460.1 28 GGSSTSK|DC 0.087 . LdBPK_161460.1 31 STSKDCK|NG 0.080 . LdBPK_161460.1 38 NGHPSPR|GM 0.145 . LdBPK_161460.1 44 RGMQNGR|SS 0.144 . LdBPK_161460.1 50 RSSPYMR|NT 0.178 . LdBPK_161460.1 57 NTHASAR|GT 0.184 . LdBPK_161460.1 79 DPLTNMK|ST 0.065 . LdBPK_161460.1 93 PTPPPPR|PT 0.109 . LdBPK_161460.1 115 GGLSFGK|AS 0.061 . LdBPK_161460.1 118 SFGKASR|AT 0.092 . LdBPK_161460.1 131 AAGGSCR|RV 0.124 . LdBPK_161460.1 132 AGGSCRR|VE 0.101 . LdBPK_161460.1 158 SLCQHAK|AE 0.084 . LdBPK_161460.1 173 FSSSSER|AG 0.106 . LdBPK_161460.1 180 AGIEAMR|RK 0.085 . LdBPK_161460.1 181 GIEAMRR|KS 0.141 . LdBPK_161460.1 182 IEAMRRK|SG 0.121 . LdBPK_161460.1 193 LPAGGDR|SP 0.135 . LdBPK_161460.1 197 GDRSPER|IC 0.147 . LdBPK_161460.1 204 ICSGSFR|VF 0.142 . LdBPK_161460.1 235 DISWFHR|RT 0.126 . LdBPK_161460.1 236 ISWFHRR|TT 0.154 . LdBPK_161460.1 252 AEPHPLR|IS 0.075 . LdBPK_161460.1 271 VAEPSSR|KR 0.083 . LdBPK_161460.1 272 AEPSSRK|RV 0.081 . LdBPK_161460.1 273 EPSSRKR|VA 0.401 . LdBPK_161460.1 280 VAEDMQR|LY 0.091 . LdBPK_161460.1 298 IAVCSAK|EA 0.093 . LdBPK_161460.1 310 STSVATR|DV 0.268 . LdBPK_161460.1 330 DASQSPR|LA 0.127 . LdBPK_161460.1 334 SPRLAAK|KD 0.064 . LdBPK_161460.1 335 PRLAAKK|DK 0.118 . LdBPK_161460.1 337 LAAKKDK|KL 0.076 . LdBPK_161460.1 338 AAKKDKK|LS 0.079 . LdBPK_161460.1 351 FTSSASK|KP 0.068 . LdBPK_161460.1 352 TSSASKK|PT 0.215 . LdBPK_161460.1 355 ASKKPTK|VE 0.069 . LdBPK_161460.1 359 PTKVEDK|TP 0.053 . LdBPK_161460.1 368 PSTAADR|RQ 0.072 . LdBPK_161460.1 369 STAADRR|QA 0.296 . LdBPK_161460.1 377 AHEQIIR|VG 0.069 . LdBPK_161460.1 382 IRVGVQR|LY 0.087 . LdBPK_161460.1 386 VQRLYQR|LN 0.077 . LdBPK_161460.1 391 QRLNELR|LV 0.091 . LdBPK_161460.1 396 LRLVVYR|VR 0.101 . LdBPK_161460.1 398 LVVYRVR|ND 0.085 . LdBPK_161460.1 406 DGNCQFR|AI 0.177 . LdBPK_161460.1 423 DYHDIIR|SQ 0.100 . LdBPK_161460.1 431 QIVSYMR|AA 0.086 . LdBPK_161460.1 434 SYMRAAR|AR 0.224 . LdBPK_161460.1 436 MRAARAR|SF 0.340 . LdBPK_161460.1 457 YYHNLAK|PG 0.070 . LdBPK_161460.1 468 GDELSLR|AA 0.132 . LdBPK_161460.1 486 VLSSEER|NC 0.082 . LdBPK_161460.1 493 NCYITYR|PS 0.112 . LdBPK_161460.1 511 FLVDVWK|LR 0.061 . LdBPK_161460.1 513 VDVWKLR|ER 0.089 . LdBPK_161460.1 515 VWKLRER|RR 0.062 . LdBPK_161460.1 516 WKLRERR|RA 0.384 . LdBPK_161460.1 517 KLRERRR|AE 0.151 . LdBPK_161460.1 520 ERRRAER|RL 0.199 . LdBPK_161460.1 521 RRRAERR|LL 0.238 . LdBPK_161460.1 524 AERRLLR|AY 0.417 . LdBPK_161460.1 547 NAFGDSR|QA 0.087 . LdBPK_161460.1 577 IQLALHR|RL 0.082 . LdBPK_161460.1 578 QLALHRR|LQ 0.127 . LdBPK_161460.1 585 LQQSEIR|CS 0.075 . LdBPK_161460.1 622 QPQSTTK|KP 0.072 . LdBPK_161460.1 623 PQSTTKK|PS 0.093 . LdBPK_161460.1 637 AAVPVPR|LS 0.118 . LdBPK_161460.1 656 AANQVAK|FR 0.078 . LdBPK_161460.1 658 NQVAKFR|AV 0.233 . LdBPK_161460.1 669 EVQSLDK|AT 0.061 . LdBPK_161460.1 680 VNIFTQR|KE 0.081 . LdBPK_161460.1 681 NIFTQRK|ES 0.079 . LdBPK_161460.1 698 VAVCFPR|KH 0.077 . LdBPK_161460.1 699 AVCFPRK|HN 0.093 . LdBPK_161460.1 706 HNEDATR|PP 0.106 . LdBPK_161460.1 719 ASLELSR|SS 0.116 . LdBPK_161460.1 749 PVSGGTR|RA 0.104 . LdBPK_161460.1 750 VSGGTRR|AD 0.137 . LdBPK_161460.1 765 ALSPTMR|QG 0.139 . LdBPK_161460.1 784 SSMHLSR|TT 0.100 . LdBPK_161460.1 791 TTQSLQR|SF 0.163 . LdBPK_161460.1 798 SFSCMQR|AS 0.118 . LdBPK_161460.1 815 FNGLNAR|SS 0.144 . LdBPK_161460.1 841 LGSLVPR|AA 0.177 . LdBPK_161460.1 848 AATTSFR|LG 0.076 . LdBPK_161460.1 879 CFSFEPR|TE 0.083 . LdBPK_161460.1 901 YNSLSVK|QE 0.068 . LdBPK_161460.1 934 SGNVSAR|-- 0.161 . ____________________________^_________________

  • Fasta :-

    >LdBPK_161460.1 ATGCTCAACTCACTCGTGGACATGCCGGTGCCGGTGACGGTGCGCCCTCTGCGCATGCTG GGCGGCGGCAGCTCCACCTCAAAGGACTGCAAGAACGGGCACCCGTCGCCACGCGGCATG CAAAACGGACGCTCATCGCCCTACATGAGAAACACTCACGCGAGCGCAAGGGGCACCACC GGCCAAGCCGCCAGCGCCGCGATGCCGCTCGTCGCCGACCCTCTCACTAACATGAAGAGC ACGGTGATCATGAGCTCGCCAACGCCGCCGCCACCACGGCCGACGATCACCATCTTCGCG GATCTCGAAGACGACGTGGGGGCTGGTGGCCTGAGCTTCGGTAAAGCTAGCCGCGCCACG GTGAGCAGCGTGGCTGCGGGCGGTAGCTGTCGCCGCGTCGAGCACGACCCCCTCACCTTC ACCCAGACCCTCTTGTCGCCTCACGGCTACAGCTCACTGTGTCAGCATGCGAAAGCCGAA GTAGCGGCGGAATCGGCGTTCTCATCATCGAGCGAGAGGGCAGGCATAGAAGCGATGCGG CGGAAGAGCGGCTCTCTCTTGCCGGCCGGTGGAGACCGCAGTCCTGAGAGGATATGTAGC GGCAGTTTCAGAGTGTTCAGCCCTGCCGACTCCGCTGAACTTGCCGCGCAGACGGACTCG AGTCTCCCTTCAGGGTTGCCGAATGATATATCGTGGTTTCACCGCCGGACGACAACGTAC CCCGGGAGTGAGGATGCGGAGCCGCATCCCTTACGCATCTCCGCGACACCCGTCGTGCCC ATCGTTCCGCACGTCGCCGAGCCATCGTCGCGCAAACGTGTGGCGGAGGATATGCAGCGA CTTTACGGTGGTGCCGGTGCAGCAGCGGGGTCGATCGCGGTGTGCTCTGCCAAAGAAGCA TCACAGGCGTCCACCTCTGTGGCAACAAGGGACGTGTCGTGGTCGAGCGGTTGTACAGGG AACACAACCGACGCCTCTCAGTCGCCGCGGCTGGCAGCTAAGAAAGACAAAAAGCTTTCC TTGCTCACCCCCTTCACCTCTTCCGCCTCCAAGAAGCCAACGAAGGTGGAAGACAAGACA CCGCCGTCGACAGCGGCTGACCGACGGCAGGCGCACGAGCAGATCATCCGGGTCGGAGTG CAGCGGCTGTACCAACGCCTCAACGAGCTGCGCCTGGTTGTCTACCGCGTCCGCAACGAT GGCAACTGCCAGTTCCGGGCCATTTCGCACCAACTGTTCGGCAATGAGGACTACCATGAC ATCATCCGCAGCCAGATCGTGTCCTACATGCGGGCGGCACGAGCAAGAAGCTTCGACTAC TACTTCGAGTCGCCTGCACATGCAGACGCATACTACCACAACTTAGCCAAGCCAGGGTCT TGGGGAGACGAGCTGTCGCTGCGGGCAGCGAGCGACTGCCTCTACGTGAATATCCATGTC TTGTCCTCCGAGGAGCGCAACTGCTACATCACCTATCGCCCCTCGTCCGACTACGCCGCC TCGGCACCGTCGTTTCTCGTAGATGTGTGGAAGCTGCGGGAGCGCCGCCGGGCCGAGCGT CGCCTTCTCCGCGCATACGGGCCGCAACAGCAGCAGCAACAGCAGGGCCACAGCAGCAGC AACGCTTTCGGAGATTCGCGGCAGGCGTCGTTGTACGCCGGCCCCCAAGGCATCGGCAGC GATGACGAGGGCGAGATGGACGCCAACGCGATCCAGCTGGCCCTGCACCGTAGGTTGCAG CAGTCCGAAATCCGCTGCAGCTTGCCGCTCTCGGCGACGGGCAGCTACAACAGCGGCGGT GGCGGTGGTGGCTTCAGTCTCGGGGCGGCGACGATGCCGCTCCTGCAGCCTCAGTCGACG ACGAAGAAGCCTAGCCAACTATTGACACCGGCGGCAGTGCCGGTTCCTCGCCTCTCTAGC GGCAACGAGGGCGCCTCAGATGACGGCGCTGCGAATCAGGTGGCGAAGTTCCGCGCTGTT GGTGCTGAGGTACAGTCACTCGATAAGGCCACACAGGCCGTCAACATCTTTACCCAACGA AAGGAGTCGGCCAACGCCTACAACACGAATGATGTTGCCGTCTGCTTTCCCCGCAAGCAC AATGAGGATGCTACGCGTCCGCCGTTCGCTGGCACGGCGTCACTTGAGCTGTCACGCTCA TCGTCGCCTCACCCGCAGGCGCAACACCACGGCCTGACAATGTCTGGCAGCACAACAGAA GAGGCGCCGGTCTCCGGTGGCACGCGGCGGGCCGACACCATGACCTCCTTTCAGGCGCTT TCACCGACGATGCGGCAAGGGGACGAGGCTGGCGAGGTCATGCTCCTTGCGTCGAGCATG CACCTCAGTCGAACGACTCAGTCGTTGCAGCGGAGCTTCTCTTGCATGCAGAGAGCGAGC TCGGTAACCGGCCCTGCAGACCACTTCAACGGCCTCAACGCGCGAAGCAGCGCCCACGCA CCTTCCGCCGGTGGTGGCGAGAGTGGTGCTAGCTCTCAGCTCCTCGGCAGCCTTGTCCCG CGTGCTGCGACAACTTCTTTCCGACTCGGCGCCGATGATGACGGTAGCCTGCCGAGTGGC TCGGATGCTGGCAGTGGCGCTAATCAGGGCGTCTGCTGCTTTTCTTTTGAGCCACGAACA GAGCCGATCGACATCTTCCTGTCGTACCTTTATCCAGTACACTACAACTCGCTCAGTGTG AAACAGGAGCAGGAGCCGGCTGCTGGCACCGTGCCCACGGCTGAGGCGACGGCAACGCCT TCTACACCGCCGCCACAGCCGAGTGGGAATGTCAGCGCTCGCTGA
  • Download Fasta

  • Fasta :-

    MLNSLVDMPVPVTVRPLRMLGGGSSTSKDCKNGHPSPRGMQNGRSSPYMRNTHASARGTT GQAASAAMPLVADPLTNMKSTVIMSSPTPPPPRPTITIFADLEDDVGAGGLSFGKASRAT VSSVAAGGSCRRVEHDPLTFTQTLLSPHGYSSLCQHAKAEVAAESAFSSSSERAGIEAMR RKSGSLLPAGGDRSPERICSGSFRVFSPADSAELAAQTDSSLPSGLPNDISWFHRRTTTY PGSEDAEPHPLRISATPVVPIVPHVAEPSSRKRVAEDMQRLYGGAGAAAGSIAVCSAKEA SQASTSVATRDVSWSSGCTGNTTDASQSPRLAAKKDKKLSLLTPFTSSASKKPTKVEDKT PPSTAADRRQAHEQIIRVGVQRLYQRLNELRLVVYRVRNDGNCQFRAISHQLFGNEDYHD IIRSQIVSYMRAARARSFDYYFESPAHADAYYHNLAKPGSWGDELSLRAASDCLYVNIHV LSSEERNCYITYRPSSDYAASAPSFLVDVWKLRERRRAERRLLRAYGPQQQQQQQGHSSS NAFGDSRQASLYAGPQGIGSDDEGEMDANAIQLALHRRLQQSEIRCSLPLSATGSYNSGG GGGGFSLGAATMPLLQPQSTTKKPSQLLTPAAVPVPRLSSGNEGASDDGAANQVAKFRAV GAEVQSLDKATQAVNIFTQRKESANAYNTNDVAVCFPRKHNEDATRPPFAGTASLELSRS SSPHPQAQHHGLTMSGSTTEEAPVSGGTRRADTMTSFQALSPTMRQGDEAGEVMLLASSM HLSRTTQSLQRSFSCMQRASSVTGPADHFNGLNARSSAHAPSAGGGESGASSQLLGSLVP RAATTSFRLGADDDGSLPSGSDAGSGANQGVCCFSFEPRTEPIDIFLSYLYPVHYNSLSV KQEQEPAAGTVPTAEATATPSTPPPQPSGNVSAR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_161460.1207 SFRVFSPADS0.997unspLdBPK_161460.1207 SFRVFSPADS0.997unspLdBPK_161460.1207 SFRVFSPADS0.997unspLdBPK_161460.1238 THRRTTTYPG0.993unspLdBPK_161460.1313 STRDVSWSSG0.996unspLdBPK_161460.1350 STSSASKKPT0.997unspLdBPK_161460.1460 SAKPGSWGDE0.991unspLdBPK_161460.1483 SHVLSSEERN0.994unspLdBPK_161460.1496 SYRPSSDYAA0.997unspLdBPK_161460.1550 SSRQASLYAG0.993unspLdBPK_161460.1722 SSRSSSPHPQ0.995unspLdBPK_161460.1801 SQRASSVTGP0.995unspLdBPK_161460.1183 SMRRKSGSLL0.995unspLdBPK_161460.1194 SGGDRSPERI0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India