LdBPK_170250.1 | peptidase t, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_170250.1OTHER0.9774720.0004790.022049
No Results

  • Fasta :-

    >LdBPK_170250.1 MSLAPIEHRLEQRFRRYSAITTQSDPRNLGKCIPSTPGQQVLAELLAKELQAMELQNVIC DKYATVTAVKPGNVPGAPRIGFICHLDTFDCGLCPHVKAQKIRYTGGDVCLNKEKNIWMR LREHAVLNKYVGQDILFSDGTSVLGADDKAAIASVMEMVANLDSSKEKHGDIVICFVPDE EIGLVGAKHLDVKGRFNVDFAYTLDCCELGEMVYECFNAASATIKFTGVSAHPMSAKGVM VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDANSTQARLEAMVREHDLAKYTARK TYMLDVAKKVQAKYPTGKVEIEIEDVYANIANSLKDDFTAIDLLEAMRKASVKPNIIPMR GGTDGAALSVKGLLTPNFFTGAHNFHSCFEFLPIPSFVKAYEVCHNIVLLGADKRKRTPS LL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_170250.1.fa Sequence name : LdBPK_170250 Sequence length : 422 VALUES OF COMPUTED PARAMETERS Coef20 : 4.421 CoefTot : 0.122 ChDiff : -3 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 1.329 0.015 0.535 MesoH : -0.263 0.528 -0.290 0.276 MuHd_075 : 13.428 11.411 4.782 2.067 MuHd_095 : 27.372 20.240 8.362 7.482 MuHd_100 : 25.719 20.243 7.662 7.995 MuHd_105 : 24.721 18.409 6.176 7.812 Hmax_075 : 0.583 8.050 -1.217 2.287 Hmax_095 : 4.113 7.438 -0.369 3.465 Hmax_100 : 4.100 9.300 -0.303 4.140 Hmax_105 : 2.333 8.633 -1.036 4.130 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6949 0.3051 DFMC : 0.7849 0.2151
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 422 LdBPK_170250.1 MSLAPIEHRLEQRFRRYSAITTQSDPRNLGKCIPSTPGQQVLAELLAKELQAMELQNVICDKYATVTAVKPGNVPGAPRI 80 GFICHLDTFDCGLCPHVKAQKIRYTGGDVCLNKEKNIWMRLREHAVLNKYVGQDILFSDGTSVLGADDKAAIASVMEMVA 160 NLDSSKEKHGDIVICFVPDEEIGLVGAKHLDVKGRFNVDFAYTLDCCELGEMVYECFNAASATIKFTGVSAHPMSAKGVM 240 VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDANSTQARLEAMVREHDLAKYTARKTYMLDVAKKVQAKYPTGKVE 320 IEIEDVYANIANSLKDDFTAIDLLEAMRKASVKPNIIPMRGGTDGAALSVKGLLTPNFFTGAHNFHSCFEFLPIPSFVKA 400 YEVCHNIVLLGADKRKRTPSLL 480 ...............P................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_170250.1 9 LAPIEHR|LE 0.072 . LdBPK_170250.1 13 EHRLEQR|FR 0.091 . LdBPK_170250.1 15 RLEQRFR|RY 0.141 . LdBPK_170250.1 16 LEQRFRR|YS 0.538 *ProP* LdBPK_170250.1 27 TTQSDPR|NL 0.135 . LdBPK_170250.1 31 DPRNLGK|CI 0.073 . LdBPK_170250.1 48 LAELLAK|EL 0.069 . LdBPK_170250.1 62 QNVICDK|YA 0.070 . LdBPK_170250.1 70 ATVTAVK|PG 0.053 . LdBPK_170250.1 79 NVPGAPR|IG 0.073 . LdBPK_170250.1 98 GLCPHVK|AQ 0.063 . LdBPK_170250.1 101 PHVKAQK|IR 0.064 . LdBPK_170250.1 103 VKAQKIR|YT 0.167 . LdBPK_170250.1 113 GDVCLNK|EK 0.059 . LdBPK_170250.1 115 VCLNKEK|NI 0.064 . LdBPK_170250.1 120 EKNIWMR|LR 0.107 . LdBPK_170250.1 122 NIWMRLR|EH 0.078 . LdBPK_170250.1 129 EHAVLNK|YV 0.098 . LdBPK_170250.1 149 VLGADDK|AA 0.077 . LdBPK_170250.1 166 ANLDSSK|EK 0.060 . LdBPK_170250.1 168 LDSSKEK|HG 0.096 . LdBPK_170250.1 188 IGLVGAK|HL 0.070 . LdBPK_170250.1 193 AKHLDVK|GR 0.068 . LdBPK_170250.1 195 HLDVKGR|FN 0.130 . LdBPK_170250.1 225 AASATIK|FT 0.107 . LdBPK_170250.1 237 AHPMSAK|GV 0.093 . LdBPK_170250.1 256 FISQFNR|EE 0.099 . LdBPK_170250.1 266 PECTELR|EG 0.079 . LdBPK_170250.1 274 GYWWFAK|MD 0.064 . LdBPK_170250.1 283 ANSTQAR|LE 0.110 . LdBPK_170250.1 289 RLEAMVR|EH 0.077 . LdBPK_170250.1 295 REHDLAK|YT 0.082 . LdBPK_170250.1 299 LAKYTAR|KT 0.100 . LdBPK_170250.1 300 AKYTARK|TY 0.068 . LdBPK_170250.1 308 YMLDVAK|KV 0.083 . LdBPK_170250.1 309 MLDVAKK|VQ 0.095 . LdBPK_170250.1 313 AKKVQAK|YP 0.082 . LdBPK_170250.1 318 AKYPTGK|VE 0.071 . LdBPK_170250.1 335 NIANSLK|DD 0.075 . LdBPK_170250.1 348 DLLEAMR|KA 0.091 . LdBPK_170250.1 349 LLEAMRK|AS 0.070 . LdBPK_170250.1 353 MRKASVK|PN 0.076 . LdBPK_170250.1 360 PNIIPMR|GG 0.111 . LdBPK_170250.1 371 GAALSVK|GL 0.066 . LdBPK_170250.1 399 PIPSFVK|AY 0.061 . LdBPK_170250.1 414 VLLGADK|RK 0.051 . LdBPK_170250.1 415 LLGADKR|KR 0.149 . LdBPK_170250.1 416 LGADKRK|RT 0.086 . LdBPK_170250.1 417 GADKRKR|TP 0.143 . ____________________________^_________________

  • Fasta :-

    >LdBPK_170250.1 ATGTCTCTCGCGCCGATCGAACACCGCCTGGAGCAGCGATTTCGCCGCTATTCCGCCATC ACCACCCAGAGCGACCCCCGCAACCTCGGCAAATGCATCCCATCCACCCCCGGGCAGCAG GTGCTGGCGGAGCTGCTCGCCAAGGAGCTTCAGGCGATGGAGCTGCAGAACGTCATCTGC GATAAGTATGCAACTGTGACGGCGGTGAAGCCAGGCAATGTGCCCGGCGCTCCGCGCATC GGATTCATCTGCCACCTCGACACCTTCGACTGCGGTCTCTGCCCGCATGTGAAGGCTCAG AAGATTCGCTACACGGGCGGTGATGTATGCCTAAACAAGGAGAAGAACATTTGGATGAGG CTGAGGGAGCACGCAGTGCTGAACAAGTACGTTGGACAGGACATTCTTTTCAGCGACGGC ACCAGCGTGCTCGGTGCGGACGACAAGGCCGCCATTGCGTCGGTGATGGAGATGGTTGCC AACCTCGACTCCAGTAAGGAGAAGCACGGCGACATCGTTATTTGCTTTGTGCCAGATGAG GAGATCGGCTTGGTAGGCGCGAAGCACCTCGACGTAAAGGGGCGCTTCAACGTCGACTTC GCCTACACGCTCGACTGCTGCGAGCTGGGAGAGATGGTGTACGAGTGCTTCAACGCCGCG AGTGCCACGATTAAGTTCACAGGTGTCTCGGCGCACCCGATGTCGGCCAAGGGCGTGATG GTGAACCCACTGCTGATGGCCGTGGACTTCATTTCCCAGTTCAACCGCGAGGAGACGCCC GAGTGCACGGAGCTGCGCGAGGGGTACTGGTGGTTCGCGAAGATGGATGCCAACTCCACC CAGGCGAGGCTCGAGGCAATGGTGCGCGAGCACGACCTCGCCAAGTACACGGCCCGCAAA ACGTACATGCTCGATGTGGCCAAGAAGGTGCAGGCCAAGTATCCGACCGGCAAGGTTGAA ATTGAGATTGAAGACGTGTATGCTAACATCGCGAACTCGCTTAAGGATGACTTCACTGCG ATTGATCTGCTGGAGGCGATGAGGAAGGCGAGCGTGAAGCCGAACATTATCCCGATGCGT GGAGGCACCGACGGTGCAGCGCTCTCCGTGAAGGGCCTCCTCACCCCCAACTTCTTCACT GGTGCGCACAACTTCCACTCCTGCTTCGAGTTCCTTCCCATCCCGTCCTTCGTGAAGGCA TATGAGGTGTGCCACAACATCGTCCTGCTCGGCGCTGATAAGCGCAAGAGGACGCCGTCC TTGCTGTAG
  • Download Fasta

  • Fasta :-

    MSLAPIEHRLEQRFRRYSAITTQSDPRNLGKCIPSTPGQQVLAELLAKELQAMELQNVIC DKYATVTAVKPGNVPGAPRIGFICHLDTFDCGLCPHVKAQKIRYTGGDVCLNKEKNIWMR LREHAVLNKYVGQDILFSDGTSVLGADDKAAIASVMEMVANLDSSKEKHGDIVICFVPDE EIGLVGAKHLDVKGRFNVDFAYTLDCCELGEMVYECFNAASATIKFTGVSAHPMSAKGVM VNPLLMAVDFISQFNREETPECTELREGYWWFAKMDANSTQARLEAMVREHDLAKYTARK TYMLDVAKKVQAKYPTGKVEIEIEDVYANIANSLKDDFTAIDLLEAMRKASVKPNIIPMR GGTDGAALSVKGLLTPNFFTGAHNFHSCFEFLPIPSFVKAYEVCHNIVLLGADKRKRTPS LL

  • title: metal binding site
  • coordinates: H85,D147,E180,E181,D205,H386
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_170250.1333 SNIANSLKDD0.997unspLdBPK_170250.1333 SNIANSLKDD0.997unspLdBPK_170250.1333 SNIANSLKDD0.997unspLdBPK_170250.1351 SMRKASVKPN0.995unspLdBPK_170250.118 SFRRYSAITT0.99unspLdBPK_170250.1259 TNREETPECT0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India