LdBPK_171190.1 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_171190.1OTHER0.9999060.0000320.000062
No Results

  • Fasta :-

    >LdBPK_171190.1 MTTLVNMPRMQAAERQRLLETKIYHDNDRDFDGQVYTHGIRLNAVANLFDGEFFLGDQED AHELFVSVMAKLETEAVKFQHHCDEVLERRSSVTPTERSSAEDEVDEEAEREEGRPNNEG GASFAEKRLLRGAHAPSAFSMRPSDVPAAASPSKPHRLSVSTTAGEVWINTLVQTRLLNI IRCRTAECHHEIVTDEVCVNLSVHIPEEPLTSPPPALPLPPQSCFPAQPPPLSPTPIFPS SSIAAAVAAPLPAMDGGGGRCRSLANLLHESMAYEALNEYRCDCCGSRTSQFQGGCFYTR PPPLLVLQLKRFATQFVNGTIIIQKNGRRVAVEDKLVIHALPSAGEWHAGQRRRGRQHRR SPDPVEPVEVTEAVEDAREGAECCPYYDPDKKCFSAALQEICDVSGGGGLAGRDGLKDEK HDSTGDGLLTTLAAAAPPSSLVRAIRCLYRLRSCVLHLGQSLHYGHYVSDFAVDGEEDDE EDGEDGETARARRTAEQEAGVRSTSQATLNSCSAVRRRWRRVNDERVEVLSDEVVQARRA GCSDTYLLLYEKVAEERVWCPAEAVLPTPVYRSSEGGKT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_171190.1.fa Sequence name : LdBPK_171190 Sequence length : 579 VALUES OF COMPUTED PARAMETERS Coef20 : 4.412 CoefTot : -0.003 ChDiff : -22 ZoneTo : 13 KR : 1 DE : 0 CleavSite : 11 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.553 1.376 0.212 0.573 MesoH : 0.209 0.309 -0.155 0.294 MuHd_075 : 10.338 10.531 4.076 2.682 MuHd_095 : 11.324 5.385 2.988 2.284 MuHd_100 : 12.095 9.157 3.176 3.427 MuHd_105 : 8.985 9.844 2.271 3.405 Hmax_075 : -0.613 6.650 -1.503 1.010 Hmax_095 : -4.025 3.413 -2.625 0.744 Hmax_100 : 1.300 3.700 -2.821 1.840 Hmax_105 : -0.100 2.800 -3.189 2.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9772 0.0228 DFMC : 0.9352 0.0648
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 579 LdBPK_171190.1 MTTLVNMPRMQAAERQRLLETKIYHDNDRDFDGQVYTHGIRLNAVANLFDGEFFLGDQEDAHELFVSVMAKLETEAVKFQ 80 HHCDEVLERRSSVTPTERSSAEDEVDEEAEREEGRPNNEGGASFAEKRLLRGAHAPSAFSMRPSDVPAAASPSKPHRLSV 160 STTAGEVWINTLVQTRLLNIIRCRTAECHHEIVTDEVCVNLSVHIPEEPLTSPPPALPLPPQSCFPAQPPPLSPTPIFPS 240 SSIAAAVAAPLPAMDGGGGRCRSLANLLHESMAYEALNEYRCDCCGSRTSQFQGGCFYTRPPPLLVLQLKRFATQFVNGT 320 IIIQKNGRRVAVEDKLVIHALPSAGEWHAGQRRRGRQHRRSPDPVEPVEVTEAVEDAREGAECCPYYDPDKKCFSAALQE 400 ICDVSGGGGLAGRDGLKDEKHDSTGDGLLTTLAAAAPPSSLVRAIRCLYRLRSCVLHLGQSLHYGHYVSDFAVDGEEDDE 480 EDGEDGETARARRTAEQEAGVRSTSQATLNSCSAVRRRWRRVNDERVEVLSDEVVQARRAGCSDTYLLLYEKVAEERVWC 560 PAEAVLPTPVYRSSEGGKT 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............P...........................P....................................... 560 ................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ LdBPK_171190.1 9 TLVNMPR|MQ 0.099 . LdBPK_171190.1 15 RMQAAER|QR 0.071 . LdBPK_171190.1 17 QAAERQR|LL 0.107 . LdBPK_171190.1 22 QRLLETK|IY 0.074 . LdBPK_171190.1 29 IYHDNDR|DF 0.160 . LdBPK_171190.1 41 VYTHGIR|LN 0.064 . LdBPK_171190.1 71 FVSVMAK|LE 0.070 . LdBPK_171190.1 78 LETEAVK|FQ 0.068 . LdBPK_171190.1 89 CDEVLER|RS 0.084 . LdBPK_171190.1 90 DEVLERR|SS 0.135 . LdBPK_171190.1 98 SVTPTER|SS 0.113 . LdBPK_171190.1 111 VDEEAER|EE 0.070 . LdBPK_171190.1 115 AEREEGR|PN 0.118 . LdBPK_171190.1 127 GASFAEK|RL 0.081 . LdBPK_171190.1 128 ASFAEKR|LL 0.166 . LdBPK_171190.1 131 AEKRLLR|GA 0.265 . LdBPK_171190.1 142 PSAFSMR|PS 0.105 . LdBPK_171190.1 154 AAASPSK|PH 0.066 . LdBPK_171190.1 157 SPSKPHR|LS 0.111 . LdBPK_171190.1 176 NTLVQTR|LL 0.079 . LdBPK_171190.1 182 RLLNIIR|CR 0.081 . LdBPK_171190.1 184 LNIIRCR|TA 0.110 . LdBPK_171190.1 260 MDGGGGR|CR 0.078 . LdBPK_171190.1 262 GGGGRCR|SL 0.145 . LdBPK_171190.1 281 EALNEYR|CD 0.087 . LdBPK_171190.1 288 CDCCGSR|TS 0.077 . LdBPK_171190.1 300 GGCFYTR|PP 0.074 . LdBPK_171190.1 310 LLVLQLK|RF 0.065 . LdBPK_171190.1 311 LVLQLKR|FA 0.233 . LdBPK_171190.1 325 GTIIIQK|NG 0.057 . LdBPK_171190.1 328 IIQKNGR|RV 0.105 . LdBPK_171190.1 329 IQKNGRR|VA 0.101 . LdBPK_171190.1 335 RVAVEDK|LV 0.089 . LdBPK_171190.1 352 EWHAGQR|RR 0.086 . LdBPK_171190.1 353 WHAGQRR|RG 0.140 . LdBPK_171190.1 354 HAGQRRR|GR 0.137 . LdBPK_171190.1 356 GQRRRGR|QH 0.307 . LdBPK_171190.1 359 RRGRQHR|RS 0.282 . LdBPK_171190.1 360 RGRQHRR|SP 0.481 . LdBPK_171190.1 378 EAVEDAR|EG 0.073 . LdBPK_171190.1 391 PYYDPDK|KC 0.060 . LdBPK_171190.1 392 YYDPDKK|CF 0.122 . LdBPK_171190.1 413 GGGLAGR|DG 0.098 . LdBPK_171190.1 417 AGRDGLK|DE 0.058 . LdBPK_171190.1 420 DGLKDEK|HD 0.062 . LdBPK_171190.1 443 PPSSLVR|AI 0.102 . LdBPK_171190.1 446 SLVRAIR|CL 0.260 . LdBPK_171190.1 450 AIRCLYR|LR 0.097 . LdBPK_171190.1 452 RCLYRLR|SC 0.099 . LdBPK_171190.1 490 EDGETAR|AR 0.107 . LdBPK_171190.1 492 GETARAR|RT 0.129 . LdBPK_171190.1 493 ETARARR|TA 0.631 *ProP* LdBPK_171190.1 502 EQEAGVR|ST 0.122 . LdBPK_171190.1 516 NSCSAVR|RR 0.072 . LdBPK_171190.1 517 SCSAVRR|RW 0.184 . LdBPK_171190.1 518 CSAVRRR|WR 0.148 . LdBPK_171190.1 520 AVRRRWR|RV 0.449 . LdBPK_171190.1 521 VRRRWRR|VN 0.556 *ProP* LdBPK_171190.1 526 RRVNDER|VE 0.072 . LdBPK_171190.1 538 DEVVQAR|RA 0.127 . LdBPK_171190.1 539 EVVQARR|AG 0.086 . LdBPK_171190.1 552 YLLLYEK|VA 0.056 . LdBPK_171190.1 557 EKVAEER|VW 0.098 . LdBPK_171190.1 572 LPTPVYR|SS 0.221 . LdBPK_171190.1 578 RSSEGGK|T- 0.075 . ____________________________^_________________

  • Fasta :-

    >LdBPK_171190.1 ATGACGACGCTCGTGAACATGCCGCGGATGCAGGCGGCGGAGCGGCAGCGCCTTCTGGAG ACGAAGATCTACCACGATAACGATCGAGACTTTGACGGGCAGGTTTACACGCACGGTATT CGACTCAACGCCGTGGCCAACTTGTTTGATGGTGAGTTCTTTCTCGGTGATCAGGAGGAT GCGCACGAGCTGTTCGTGTCGGTCATGGCGAAGCTGGAGACCGAGGCGGTGAAGTTTCAG CATCACTGCGATGAAGTACTCGAGCGCCGCTCCTCTGTCACCCCAACGGAGAGAAGCAGC GCGGAGGACGAAGTGGACGAGGAAGCGGAGCGGGAGGAGGGGAGGCCCAACAACGAAGGG GGGGCGAGCTTCGCGGAGAAGCGTCTGCTGCGCGGGGCTCACGCACCCTCCGCCTTCTCC ATGAGGCCATCGGACGTTCCGGCTGCTGCCAGCCCCAGTAAACCACACCGCCTGTCTGTC TCCACAACCGCGGGGGAGGTGTGGATCAACACGCTTGTGCAGACGCGACTCCTCAACATC ATTCGATGCCGCACCGCCGAGTGCCACCACGAGATCGTCACAGACGAGGTCTGCGTGAAC CTCTCCGTGCACATTCCAGAGGAGCCCCTGACATCTCCGCCACCAGCGCTGCCTCTGCCG CCACAGTCGTGCTTCCCCGCGCAGCCGCCTCCGCTTTCGCCCACGCCCATCTTTCCCTCA TCTTCGATTGCGGCGGCTGTGGCAGCCCCGCTGCCAGCTATGGATGGAGGAGGTGGCCGG TGCCGCTCCCTCGCGAACCTCTTGCACGAGTCCATGGCTTACGAAGCGCTGAACGAGTAC CGGTGCGACTGTTGCGGCTCACGGACTTCTCAGTTTCAAGGCGGGTGCTTCTACACACGT CCGCCGCCGCTGCTGGTGCTACAGCTGAAGCGGTTCGCGACCCAGTTTGTGAACGGCACC ATCATCATCCAGAAGAATGGCCGCCGTGTCGCGGTGGAGGACAAGCTGGTAATTCACGCG CTGCCCAGTGCAGGGGAGTGGCATGCGGGGCAGCGGCGACGGGGGCGGCAACACCGGCGC AGTCCGGACCCCGTGGAGCCCGTAGAGGTGACCGAGGCAGTGGAGGACGCGCGTGAGGGT GCGGAGTGCTGCCCCTACTACGACCCCGACAAGAAATGCTTCTCTGCCGCTCTGCAGGAG ATCTGCGACGTGAGCGGGGGCGGTGGACTGGCAGGGCGGGATGGTTTGAAGGATGAAAAG CACGATAGCACGGGCGACGGCCTCCTCACGACCCTCGCTGCTGCAGCTCCTCCCTCTTCT CTTGTGCGGGCCATTCGGTGCCTTTACCGTCTGCGGAGCTGCGTCCTGCACCTCGGCCAA AGCCTCCACTACGGCCATTACGTGTCGGACTTTGCCGTCGACGGCGAGGAGGATGACGAG GAGGATGGCGAGGACGGGGAGACTGCCAGAGCGCGCCGCACGGCAGAGCAAGAGGCAGGT GTAAGGTCCACCTCTCAGGCGACACTGAATTCGTGCAGTGCTGTACGACGGCGCTGGCGC CGCGTGAACGACGAGCGGGTCGAGGTGCTCAGCGACGAAGTGGTGCAGGCCCGCCGTGCC GGCTGCTCCGACACGTACCTTCTTCTGTACGAAAAGGTCGCGGAGGAACGGGTGTGGTGC CCTGCCGAGGCAGTGCTGCCGACGCCTGTCTACCGCAGCTCCGAAGGGGGCAAGACGTGA
  • Download Fasta

  • Fasta :-

    MTTLVNMPRMQAAERQRLLETKIYHDNDRDFDGQVYTHGIRLNAVANLFDGEFFLGDQED AHELFVSVMAKLETEAVKFQHHCDEVLERRSSVTPTERSSAEDEVDEEAEREEGRPNNEG GASFAEKRLLRGAHAPSAFSMRPSDVPAAASPSKPHRLSVSTTAGEVWINTLVQTRLLNI IRCRTAECHHEIVTDEVCVNLSVHIPEEPLTSPPPALPLPPQSCFPAQPPPLSPTPIFPS SSIAAAVAAPLPAMDGGGGRCRSLANLLHESMAYEALNEYRCDCCGSRTSQFQGGCFYTR PPPLLVLQLKRFATQFVNGTIIIQKNGRRVAVEDKLVIHALPSAGEWHAGQRRRGRQHRR SPDPVEPVEVTEAVEDAREGAECCPYYDPDKKCFSAALQEICDVSGGGGLAGRDGLKDEK HDSTGDGLLTTLAAAAPPSSLVRAIRCLYRLRSCVLHLGQSLHYGHYVSDFAVDGEEDDE EDGEDGETARARRTAEQEAGVRSTSQATLNSCSAVRRRWRRVNDERVEVLSDEVVQARRA GCSDTYLLLYEKVAEERVWCPAEAVLPTPVYRSSEGGKT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_171190.1140 SPSAFSMRPS0.991unspLdBPK_171190.1140 SPSAFSMRPS0.991unspLdBPK_171190.1140 SPSAFSMRPS0.991unspLdBPK_171190.1159 SPHRLSVSTT0.992unspLdBPK_171190.1361 SQHRRSPDPV0.997unspLdBPK_171190.1423 SEKHDSTGDG0.996unspLdBPK_171190.1573 SPVYRSSEGG0.994unspLdBPK_171190.192 SERRSSVTPT0.997unspLdBPK_171190.1100 STERSSAEDE0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India