LdBPK_180620.1 | ATP-dependent zinc metallopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      GO:0004222      

  • Computed_GO_Functions:  ATP binding      metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_180620.1OTHER0.9986480.0011290.000223
No Results

  • Fasta :-

    >LdBPK_180620.1 MSFTDAQSPEYQRGINDAERHRRATEENWIRPALGPIVWLGVPFLLAWMYMRRVSLGSPL GSGSASGSGNPFMSMMEQMMPIKKRQFRVDVKGTRFSDVVGIPEAKAEVRQYVDFLTEPN KFTRLGARLPKGCLLTGEPGTGKTLLAKAVAGEANVAFFSCNGADFIELIGGSGPKRVRE LFEEARAAAPAIIFIDEIDAIGSRAGKQGGSVSSEENRTINQLLAELDGLSTSADPIVVL AATNFQDNIDKALLREGRFDRKIAIEMPDLSARRELFEHYLNRICTGDPNGRTKDEGGKE LALDTSVSNKALADQLADLTPGLSPATVATVVNEAALQSGIAGKPLVQLPDLLEALDNTL MGRKHRNRQSDQSARRTAIHEAGHALTAWMLPVVQKVLKISVTPRGHAMGYTQRAGTEFH EYQTNATLFADMVVMLGGRAAEEVMLGDVSAGAMDDLQRATDVALKQMLAFGMSTHTGLL SYHPDYTQAGRDFTTFSNEAQYRAELEAQKLLAAAHSTAVDIVKRHKDKMEIMVKALLEK KELSTRDIEELWGPRPSTPTVEDIVHKVIEVTGSYAEITATVGPAAAAVATPSIAGVY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_180620.1.fa Sequence name : LdBPK_180620 Sequence length : 598 VALUES OF COMPUTED PARAMETERS Coef20 : 3.413 CoefTot : 0.112 ChDiff : -8 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.071 1.800 0.228 0.818 MesoH : -0.348 0.384 -0.343 0.227 MuHd_075 : 8.297 8.491 3.627 3.599 MuHd_095 : 31.334 15.320 7.534 6.111 MuHd_100 : 29.223 13.281 6.834 5.402 MuHd_105 : 24.374 10.427 5.813 4.333 Hmax_075 : -4.400 0.933 -2.548 1.750 Hmax_095 : 5.800 3.200 -0.458 3.060 Hmax_100 : 5.800 3.200 -0.458 3.060 Hmax_105 : 5.338 1.313 -0.759 2.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8310 0.1690 DFMC : 0.8652 0.1348
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 598 LdBPK_180620.1 MSFTDAQSPEYQRGINDAERHRRATEENWIRPALGPIVWLGVPFLLAWMYMRRVSLGSPLGSGSASGSGNPFMSMMEQMM 80 PIKKRQFRVDVKGTRFSDVVGIPEAKAEVRQYVDFLTEPNKFTRLGARLPKGCLLTGEPGTGKTLLAKAVAGEANVAFFS 160 CNGADFIELIGGSGPKRVRELFEEARAAAPAIIFIDEIDAIGSRAGKQGGSVSSEENRTINQLLAELDGLSTSADPIVVL 240 AATNFQDNIDKALLREGRFDRKIAIEMPDLSARRELFEHYLNRICTGDPNGRTKDEGGKELALDTSVSNKALADQLADLT 320 PGLSPATVATVVNEAALQSGIAGKPLVQLPDLLEALDNTLMGRKHRNRQSDQSARRTAIHEAGHALTAWMLPVVQKVLKI 400 SVTPRGHAMGYTQRAGTEFHEYQTNATLFADMVVMLGGRAAEEVMLGDVSAGAMDDLQRATDVALKQMLAFGMSTHTGLL 480 SYHPDYTQAGRDFTTFSNEAQYRAELEAQKLLAAAHSTAVDIVKRHKDKMEIMVKALLEKKELSTRDIEELWGPRPSTPT 560 VEDIVHKVIEVTGSYAEITATVGPAAAAVATPSIAGVY 640 ......................P......................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_180620.1 13 QSPEYQR|GI 0.129 . LdBPK_180620.1 20 GINDAER|HR 0.095 . LdBPK_180620.1 22 NDAERHR|RA 0.095 . LdBPK_180620.1 23 DAERHRR|AT 0.542 *ProP* LdBPK_180620.1 31 TEENWIR|PA 0.097 . LdBPK_180620.1 52 LAWMYMR|RV 0.109 . LdBPK_180620.1 53 AWMYMRR|VS 0.115 . LdBPK_180620.1 83 EQMMPIK|KR 0.056 . LdBPK_180620.1 84 QMMPIKK|RQ 0.082 . LdBPK_180620.1 85 MMPIKKR|QF 0.215 . LdBPK_180620.1 88 IKKRQFR|VD 0.367 . LdBPK_180620.1 92 QFRVDVK|GT 0.065 . LdBPK_180620.1 95 VDVKGTR|FS 0.094 . LdBPK_180620.1 106 VGIPEAK|AE 0.059 . LdBPK_180620.1 110 EAKAEVR|QY 0.095 . LdBPK_180620.1 121 FLTEPNK|FT 0.062 . LdBPK_180620.1 124 EPNKFTR|LG 0.090 . LdBPK_180620.1 128 FTRLGAR|LP 0.085 . LdBPK_180620.1 131 LGARLPK|GC 0.104 . LdBPK_180620.1 143 GEPGTGK|TL 0.058 . LdBPK_180620.1 148 GKTLLAK|AV 0.078 . LdBPK_180620.1 176 IGGSGPK|RV 0.072 . LdBPK_180620.1 177 GGSGPKR|VR 0.168 . LdBPK_180620.1 179 SGPKRVR|EL 0.091 . LdBPK_180620.1 186 ELFEEAR|AA 0.104 . LdBPK_180620.1 204 IDAIGSR|AG 0.090 . LdBPK_180620.1 207 IGSRAGK|QG 0.159 . LdBPK_180620.1 218 VSSEENR|TI 0.120 . LdBPK_180620.1 251 FQDNIDK|AL 0.060 . LdBPK_180620.1 255 IDKALLR|EG 0.072 . LdBPK_180620.1 258 ALLREGR|FD 0.245 . LdBPK_180620.1 261 REGRFDR|KI 0.303 . LdBPK_180620.1 262 EGRFDRK|IA 0.086 . LdBPK_180620.1 273 MPDLSAR|RE 0.069 . LdBPK_180620.1 274 PDLSARR|EL 0.100 . LdBPK_180620.1 283 FEHYLNR|IC 0.092 . LdBPK_180620.1 292 TGDPNGR|TK 0.097 . LdBPK_180620.1 294 DPNGRTK|DE 0.108 . LdBPK_180620.1 299 TKDEGGK|EL 0.057 . LdBPK_180620.1 310 DTSVSNK|AL 0.091 . LdBPK_180620.1 344 QSGIAGK|PL 0.068 . LdBPK_180620.1 363 DNTLMGR|KH 0.073 . LdBPK_180620.1 364 NTLMGRK|HR 0.067 . LdBPK_180620.1 366 LMGRKHR|NR 0.210 . LdBPK_180620.1 368 GRKHRNR|QS 0.168 . LdBPK_180620.1 375 QSDQSAR|RT 0.108 . LdBPK_180620.1 376 SDQSARR|TA 0.177 . LdBPK_180620.1 396 MLPVVQK|VL 0.064 . LdBPK_180620.1 399 VVQKVLK|IS 0.061 . LdBPK_180620.1 405 KISVTPR|GH 0.146 . LdBPK_180620.1 414 AMGYTQR|AG 0.078 . LdBPK_180620.1 439 VVMLGGR|AA 0.099 . LdBPK_180620.1 459 AMDDLQR|AT 0.122 . LdBPK_180620.1 466 ATDVALK|QM 0.057 . LdBPK_180620.1 491 DYTQAGR|DF 0.085 . LdBPK_180620.1 503 SNEAQYR|AE 0.101 . LdBPK_180620.1 510 AELEAQK|LL 0.059 . LdBPK_180620.1 524 TAVDIVK|RH 0.066 . LdBPK_180620.1 525 AVDIVKR|HK 0.255 . LdBPK_180620.1 527 DIVKRHK|DK 0.070 . LdBPK_180620.1 529 VKRHKDK|ME 0.072 . LdBPK_180620.1 535 KMEIMVK|AL 0.059 . LdBPK_180620.1 540 VKALLEK|KE 0.056 . LdBPK_180620.1 541 KALLEKK|EL 0.082 . LdBPK_180620.1 546 KKELSTR|DI 0.110 . LdBPK_180620.1 555 EELWGPR|PS 0.072 . LdBPK_180620.1 567 VEDIVHK|VI 0.066 . ____________________________^_________________

  • Fasta :-

    >LdBPK_180620.1 ATGTCCTTCACCGATGCGCAGAGTCCCGAATACCAACGGGGCATCAACGACGCGGAGCGG CATCGCAGGGCGACAGAGGAAAACTGGATACGGCCCGCCCTCGGCCCCATCGTATGGCTC GGCGTGCCATTCTTGCTGGCATGGATGTATATGCGCCGTGTCTCGCTGGGCAGTCCGCTC GGCAGCGGATCCGCCAGCGGCAGCGGCAACCCTTTCATGAGCATGATGGAGCAGATGATG CCGATTAAGAAGCGGCAGTTTCGCGTCGACGTGAAAGGTACAAGGTTCTCCGACGTTGTC GGCATCCCGGAGGCGAAGGCCGAGGTGCGCCAGTACGTCGACTTCCTCACAGAGCCGAAC AAGTTCACTCGGCTCGGGGCGCGACTGCCGAAGGGGTGTCTGCTGACGGGGGAGCCCGGC ACAGGCAAGACACTGCTGGCCAAGGCCGTCGCCGGTGAAGCGAATGTGGCTTTCTTCAGC TGCAACGGTGCGGACTTTATTGAGCTCATAGGTGGCAGTGGCCCAAAGCGGGTGCGCGAG CTCTTCGAGGAAGCGCGGGCGGCCGCGCCGGCGATCATCTTCATCGACGAAATCGACGCC ATCGGCTCCCGCGCTGGCAAGCAGGGCGGCTCCGTCAGCAGCGAGGAGAACCGCACCATC AACCAGCTGCTCGCTGAGTTGGATGGGCTCAGCACGAGCGCCGATCCCATTGTTGTGCTG GCGGCCACGAATTTCCAGGACAACATCGACAAGGCGCTGCTGCGTGAGGGCCGCTTCGAC CGAAAAATTGCCATTGAGATGCCCGACCTCTCCGCGCGTCGCGAGCTCTTCGAGCACTAT CTTAACCGCATCTGCACTGGTGACCCAAACGGCCGCACAAAGGATGAGGGCGGCAAGGAG CTGGCGCTAGACACTAGCGTGAGCAACAAGGCGCTGGCAGACCAGCTGGCGGACCTCACG CCAGGGCTGTCGCCGGCCACGGTGGCCACGGTCGTAAACGAGGCGGCGCTGCAGAGCGGA ATAGCCGGTAAGCCGCTTGTGCAGCTGCCGGATCTGCTGGAGGCACTGGACAACACGCTT ATGGGCCGCAAGCACCGCAATCGCCAGAGCGACCAATCGGCTCGCCGCACCGCGATTCAC GAAGCCGGTCACGCTCTGACGGCGTGGATGCTACCGGTTGTGCAGAAAGTGCTGAAGATC AGCGTCACCCCGCGCGGGCACGCGATGGGCTACACGCAGCGCGCCGGGACTGAGTTTCAC GAATATCAAACAAACGCGACGCTCTTCGCCGACATGGTGGTCATGCTCGGCGGCCGCGCC GCAGAGGAGGTGATGCTAGGCGACGTGTCAGCCGGTGCGATGGACGACTTACAGCGGGCC ACTGACGTGGCGCTCAAGCAGATGCTGGCGTTTGGCATGAGCACACACACGGGGTTGCTG TCGTACCACCCTGATTACACTCAAGCAGGGCGGGACTTCACGACCTTTTCCAACGAAGCC CAGTACCGCGCTGAACTGGAGGCGCAGAAGCTGCTTGCAGCCGCCCACTCCACCGCCGTG GACATCGTCAAGCGTCACAAGGACAAAATGGAGATTATGGTGAAGGCGCTACTGGAGAAG AAGGAGCTGTCGACTCGCGACATTGAGGAGCTCTGGGGCCCGCGGCCATCGACGCCGACG GTGGAGGACATTGTGCACAAGGTCATCGAGGTGACTGGCAGCTACGCCGAGATCACCGCG ACCGTTGGCCCTGCGGCGGCAGCGGTGGCGACACCGAGCATTGCGGGAGTGTATTAA
  • Download Fasta

  • Fasta :-

    MSFTDAQSPEYQRGINDAERHRRATEENWIRPALGPIVWLGVPFLLAWMYMRRVSLGSPL GSGSASGSGNPFMSMMEQMMPIKKRQFRVDVKGTRFSDVVGIPEAKAEVRQYVDFLTEPN KFTRLGARLPKGCLLTGEPGTGKTLLAKAVAGEANVAFFSCNGADFIELIGGSGPKRVRE LFEEARAAAPAIIFIDEIDAIGSRAGKQGGSVSSEENRTINQLLAELDGLSTSADPIVVL AATNFQDNIDKALLREGRFDRKIAIEMPDLSARRELFEHYLNRICTGDPNGRTKDEGGKE LALDTSVSNKALADQLADLTPGLSPATVATVVNEAALQSGIAGKPLVQLPDLLEALDNTL MGRKHRNRQSDQSARRTAIHEAGHALTAWMLPVVQKVLKISVTPRGHAMGYTQRAGTEFH EYQTNATLFADMVVMLGGRAAEEVMLGDVSAGAMDDLQRATDVALKQMLAFGMSTHTGLL SYHPDYTQAGRDFTTFSNEAQYRAELEAQKLLAAAHSTAVDIVKRHKDKMEIMVKALLEK KELSTRDIEELWGPRPSTPTVEDIVHKVIEVTGSYAEITATVGPAAAAVATPSIAGVY

  • title: ATP binding site
  • coordinates: E138,P139,G140,T141,G142,K143,T144,L145,D196,N244
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_180620.1213 SGGSVSSEEN0.993unspLdBPK_180620.1213 SGGSVSSEEN0.993unspLdBPK_180620.1213 SGGSVSSEEN0.993unspLdBPK_180620.1373 SQSDQSARRT0.996unspLdBPK_180620.1544 SKKELSTRDI0.998unspLdBPK_180620.18 STDAQSPEYQ0.995unspLdBPK_180620.155 SMRRVSLGSP0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India