LdBPK_181070.1 | cysteine peptidase, Clan CA, family C2, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_181070.1OTHER0.9999690.0000190.000012
No Results

  • Fasta :-

    >LdBPK_181070.1 MTVTREQSYISVCKELNDPPLRQLQETLKYGDARLDVSGIYLPRKHFRCVLQFVEERPDI EELILDGANIGVEEVKLLKESLLRSCVSKLSLQRIKLDSASANIIRQLCIENSNLVSVVL RDTCIPSYLVDEIMLIVDLNRLNAESMTSTSTAGAQQNASAVGRWMLFRGKKDRDFCATV KLSSSVQSKVVDSFVTSYDSVFSDISFQQDAFNHPVAGTETIRWSKYCALHSFQEAGLGN SKAPFSPSPYYNNQNLCAALNILSIYDALCKSLVVKRYPDAGLYVFRLFAGESPVEVYVD DLVPCVHVDAACTIVGLNSCSSPFYAAVLEKAVAKAIGGYRYIQELSLRDCIDLLTGCTS FEVNLLSRSSFSTTFDTLRALSEYGHKLVACAIPRTSIEEQTFEESGVCCGIPYAILKTD ACQKNGAHYAFLIQVAAPSSERALKYAFEYEMYKTEEVNGNRVLWMTFEDFAATFERIFL LLWPFDDAVSDHKTTVEFQVASESLSAASQFAKNPSFLIQNKGRNSSAVMVSLSASSASD ATIGAECLFYKAANTENGASLRRYNVCEGNAFFGSEVFEGNEGSVFFNLLPTERLQMTLS SRVPSSFRIRISSVENVDAMQLPDIMASSTFSSKWNTLFKAKRFSDDIFQLNRISVGCTL SLVLALSQNTGSSPPFPLGVLGWKGTSIDVVDATKPHFSTQQERSTVCVHSFLLTLAAGE SFFLLPYCCGSRCPDDYDLTVFCKESFTQSSVKTASVLRCTKT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_181070.1.fa Sequence name : LdBPK_181070 Sequence length : 763 VALUES OF COMPUTED PARAMETERS Coef20 : 3.574 CoefTot : 0.135 ChDiff : -12 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.412 1.518 0.282 0.619 MesoH : 0.182 0.806 -0.140 0.309 MuHd_075 : 20.885 8.932 4.945 3.530 MuHd_095 : 21.800 10.361 6.340 2.345 MuHd_100 : 13.552 10.226 5.464 2.406 MuHd_105 : 16.699 15.516 6.922 4.727 Hmax_075 : 0.900 3.700 -0.756 1.440 Hmax_095 : 3.000 4.462 -0.045 1.690 Hmax_100 : -1.000 5.900 0.068 1.480 Hmax_105 : 2.800 9.500 1.210 3.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8705 0.1295 DFMC : 0.8589 0.1411
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 763 LdBPK_181070.1 MTVTREQSYISVCKELNDPPLRQLQETLKYGDARLDVSGIYLPRKHFRCVLQFVEERPDIEELILDGANIGVEEVKLLKE 80 SLLRSCVSKLSLQRIKLDSASANIIRQLCIENSNLVSVVLRDTCIPSYLVDEIMLIVDLNRLNAESMTSTSTAGAQQNAS 160 AVGRWMLFRGKKDRDFCATVKLSSSVQSKVVDSFVTSYDSVFSDISFQQDAFNHPVAGTETIRWSKYCALHSFQEAGLGN 240 SKAPFSPSPYYNNQNLCAALNILSIYDALCKSLVVKRYPDAGLYVFRLFAGESPVEVYVDDLVPCVHVDAACTIVGLNSC 320 SSPFYAAVLEKAVAKAIGGYRYIQELSLRDCIDLLTGCTSFEVNLLSRSSFSTTFDTLRALSEYGHKLVACAIPRTSIEE 400 QTFEESGVCCGIPYAILKTDACQKNGAHYAFLIQVAAPSSERALKYAFEYEMYKTEEVNGNRVLWMTFEDFAATFERIFL 480 LLWPFDDAVSDHKTTVEFQVASESLSAASQFAKNPSFLIQNKGRNSSAVMVSLSASSASDATIGAECLFYKAANTENGAS 560 LRRYNVCEGNAFFGSEVFEGNEGSVFFNLLPTERLQMTLSSRVPSSFRIRISSVENVDAMQLPDIMASSTFSSKWNTLFK 640 AKRFSDDIFQLNRISVGCTLSLVLALSQNTGSSPPFPLGVLGWKGTSIDVVDATKPHFSTQQERSTVCVHSFLLTLAAGE 720 SFFLLPYCCGSRCPDDYDLTVFCKESFTQSSVKTASVLRCTKT 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ........................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_181070.1 5 --MTVTR|EQ 0.087 . LdBPK_181070.1 14 SYISVCK|EL 0.063 . LdBPK_181070.1 22 LNDPPLR|QL 0.086 . LdBPK_181070.1 29 QLQETLK|YG 0.070 . LdBPK_181070.1 34 LKYGDAR|LD 0.090 . LdBPK_181070.1 44 SGIYLPR|KH 0.085 . LdBPK_181070.1 45 GIYLPRK|HF 0.092 . LdBPK_181070.1 48 LPRKHFR|CV 0.213 . LdBPK_181070.1 57 LQFVEER|PD 0.080 . LdBPK_181070.1 76 IGVEEVK|LL 0.062 . LdBPK_181070.1 79 EEVKLLK|ES 0.049 . LdBPK_181070.1 84 LKESLLR|SC 0.097 . LdBPK_181070.1 89 LRSCVSK|LS 0.074 . LdBPK_181070.1 94 SKLSLQR|IK 0.074 . LdBPK_181070.1 96 LSLQRIK|LD 0.065 . LdBPK_181070.1 106 ASANIIR|QL 0.105 . LdBPK_181070.1 121 LVSVVLR|DT 0.117 . LdBPK_181070.1 141 LIVDLNR|LN 0.080 . LdBPK_181070.1 164 NASAVGR|WM 0.090 . LdBPK_181070.1 169 GRWMLFR|GK 0.112 . LdBPK_181070.1 171 WMLFRGK|KD 0.058 . LdBPK_181070.1 172 MLFRGKK|DR 0.322 . LdBPK_181070.1 174 FRGKKDR|DF 0.196 . LdBPK_181070.1 181 DFCATVK|LS 0.061 . LdBPK_181070.1 189 SSSVQSK|VV 0.108 . LdBPK_181070.1 223 AGTETIR|WS 0.072 . LdBPK_181070.1 226 ETIRWSK|YC 0.100 . LdBPK_181070.1 242 AGLGNSK|AP 0.052 . LdBPK_181070.1 271 IYDALCK|SL 0.064 . LdBPK_181070.1 276 CKSLVVK|RY 0.073 . LdBPK_181070.1 277 KSLVVKR|YP 0.316 . LdBPK_181070.1 287 AGLYVFR|LF 0.080 . LdBPK_181070.1 331 YAAVLEK|AV 0.100 . LdBPK_181070.1 335 LEKAVAK|AI 0.095 . LdBPK_181070.1 341 KAIGGYR|YI 0.078 . LdBPK_181070.1 349 IQELSLR|DC 0.111 . LdBPK_181070.1 368 EVNLLSR|SS 0.105 . LdBPK_181070.1 379 TTFDTLR|AL 0.109 . LdBPK_181070.1 387 LSEYGHK|LV 0.069 . LdBPK_181070.1 395 VACAIPR|TS 0.084 . LdBPK_181070.1 418 IPYAILK|TD 0.061 . LdBPK_181070.1 424 KTDACQK|NG 0.055 . LdBPK_181070.1 442 AAPSSER|AL 0.083 . LdBPK_181070.1 445 SSERALK|YA 0.261 . LdBPK_181070.1 454 FEYEMYK|TE 0.060 . LdBPK_181070.1 462 EEVNGNR|VL 0.072 . LdBPK_181070.1 477 FAATFER|IF 0.073 . LdBPK_181070.1 493 DAVSDHK|TT 0.057 . LdBPK_181070.1 513 AASQFAK|NP 0.074 . LdBPK_181070.1 522 SFLIQNK|GR 0.063 . LdBPK_181070.1 524 LIQNKGR|NS 0.147 . LdBPK_181070.1 551 AECLFYK|AA 0.079 . LdBPK_181070.1 562 ENGASLR|RY 0.093 . LdBPK_181070.1 563 NGASLRR|YN 0.133 . LdBPK_181070.1 594 NLLPTER|LQ 0.063 . LdBPK_181070.1 602 QMTLSSR|VP 0.070 . LdBPK_181070.1 608 RVPSSFR|IR 0.074 . LdBPK_181070.1 610 PSSFRIR|IS 0.118 . LdBPK_181070.1 634 SSTFSSK|WN 0.058 . LdBPK_181070.1 640 KWNTLFK|AK 0.070 . LdBPK_181070.1 642 NTLFKAK|RF 0.075 . LdBPK_181070.1 643 TLFKAKR|FS 0.348 . LdBPK_181070.1 653 DIFQLNR|IS 0.068 . LdBPK_181070.1 684 LGVLGWK|GT 0.067 . LdBPK_181070.1 695 DVVDATK|PH 0.056 . LdBPK_181070.1 704 FSTQQER|ST 0.127 . LdBPK_181070.1 732 PYCCGSR|CP 0.074 . LdBPK_181070.1 744 DLTVFCK|ES 0.067 . LdBPK_181070.1 753 FTQSSVK|TA 0.076 . LdBPK_181070.1 759 KTASVLR|CT 0.096 . LdBPK_181070.1 762 SVLRCTK|T- 0.096 . ____________________________^_________________

  • Fasta :-

    >LdBPK_181070.1 ATGACAGTGACACGGGAGCAGTCATATATCTCTGTGTGCAAGGAACTAAATGACCCCCCT CTTCGCCAGCTTCAAGAGACTTTGAAGTATGGCGATGCAAGGCTTGATGTCAGCGGAATT TACTTACCACGGAAGCACTTTCGCTGCGTATTGCAATTTGTTGAGGAGCGCCCCGACATC GAAGAGCTAATCTTGGATGGTGCGAACATAGGTGTGGAGGAGGTGAAGCTACTGAAAGAG TCATTGCTGCGCTCTTGCGTGTCAAAGCTGAGTCTGCAACGGATAAAGCTAGACTCTGCA AGCGCGAATATTATTCGTCAACTCTGCATTGAAAATTCGAACTTAGTGTCTGTTGTACTG AGAGACACGTGCATCCCTTCTTATCTAGTCGATGAAATTATGCTGATTGTTGATTTGAAT CGCTTGAACGCAGAATCGATGACCTCCACGTCTACTGCAGGGGCGCAACAGAACGCCTCG GCTGTGGGACGGTGGATGCTTTTCAGAGGAAAAAAAGACCGTGACTTTTGTGCGACTGTG AAGCTATCGTCTAGTGTGCAGAGTAAAGTTGTCGACAGTTTTGTTACATCATACGATTCT GTTTTTAGCGATATCTCTTTTCAGCAAGACGCTTTCAATCACCCTGTTGCAGGGACGGAA ACAATTCGGTGGAGTAAATACTGTGCATTGCACTCCTTTCAGGAAGCTGGGCTGGGAAAC TCCAAAGCTCCTTTCTCGCCATCGCCTTATTACAACAACCAGAATTTGTGCGCTGCTTTG AATATTCTCAGCATTTACGATGCCCTCTGCAAGTCGTTGGTTGTAAAACGATACCCTGAT GCAGGACTGTACGTTTTTCGCCTTTTTGCTGGCGAATCACCCGTTGAGGTGTACGTTGAC GATTTAGTTCCATGCGTTCACGTAGATGCGGCGTGCACCATTGTTGGTTTGAATTCGTGC AGTAGCCCGTTTTACGCCGCGGTTCTTGAGAAGGCTGTTGCAAAAGCAATTGGTGGTTAT CGCTACATCCAAGAACTATCGTTACGTGACTGCATCGATCTCCTTACAGGTTGTACAAGT TTCGAAGTGAATTTATTGAGCCGATCATCGTTTTCTACCACTTTCGACACGCTGCGGGCC CTGAGCGAGTATGGACACAAACTGGTCGCGTGCGCCATCCCGCGTACCTCGATTGAGGAA CAGACTTTTGAAGAGAGTGGGGTGTGCTGCGGCATTCCGTACGCCATTTTGAAAACGGAT GCTTGCCAAAAAAATGGTGCTCACTATGCTTTTTTAATCCAGGTGGCTGCCCCATCGAGT GAAAGGGCCCTGAAGTACGCGTTTGAGTATGAGATGTACAAAACGGAAGAGGTGAACGGG AATCGTGTTTTGTGGATGACGTTTGAAGACTTTGCTGCTACGTTTGAGCGCATTTTTCTT CTGCTGTGGCCTTTCGACGACGCTGTATCGGATCATAAGACGACTGTGGAGTTTCAAGTA GCAAGCGAGTCTCTGTCTGCGGCTTCTCAATTCGCCAAGAACCCCAGTTTTTTGATTCAA AACAAAGGAAGGAACTCAAGCGCGGTTATGGTGTCGCTATCCGCTTCTTCCGCATCTGAC GCCACAATTGGAGCCGAATGTCTTTTTTACAAGGCCGCTAATACTGAGAACGGAGCTTCC CTGCGTCGCTACAATGTATGCGAAGGCAACGCATTTTTTGGCTCAGAGGTGTTCGAAGGG AATGAGGGCTCTGTTTTTTTCAATCTGCTTCCCACAGAGCGCCTGCAGATGACTCTTTCT TCGCGTGTACCAAGCAGTTTTAGGATTCGAATATCTTCCGTAGAGAATGTCGACGCAATG CAGCTCCCAGACATTATGGCTTCGTCGACTTTTTCTTCAAAGTGGAATACACTCTTTAAG GCAAAGCGTTTTTCTGACGATATATTTCAGCTTAACAGGATTAGTGTTGGATGCACTCTC AGTCTTGTGCTTGCTCTCTCTCAAAACACTGGCAGCAGCCCTCCTTTCCCGCTCGGAGTG CTTGGTTGGAAGGGTACTTCTATCGACGTTGTCGATGCAACCAAGCCACATTTTTCCACA CAACAGGAAAGGAGCACTGTCTGCGTACATAGCTTCCTGCTTACTCTCGCTGCTGGCGAA AGCTTCTTTCTCCTCCCTTACTGCTGCGGAAGCCGATGTCCCGATGATTATGATCTTACA GTTTTCTGTAAGGAGAGCTTTACGCAGAGCAGTGTGAAAACGGCCTCTGTGCTACGATGT ACAAAGACCTGA
  • Download Fasta

  • Fasta :-

    MTVTREQSYISVCKELNDPPLRQLQETLKYGDARLDVSGIYLPRKHFRCVLQFVEERPDI EELILDGANIGVEEVKLLKESLLRSCVSKLSLQRIKLDSASANIIRQLCIENSNLVSVVL RDTCIPSYLVDEIMLIVDLNRLNAESMTSTSTAGAQQNASAVGRWMLFRGKKDRDFCATV KLSSSVQSKVVDSFVTSYDSVFSDISFQQDAFNHPVAGTETIRWSKYCALHSFQEAGLGN SKAPFSPSPYYNNQNLCAALNILSIYDALCKSLVVKRYPDAGLYVFRLFAGESPVEVYVD DLVPCVHVDAACTIVGLNSCSSPFYAAVLEKAVAKAIGGYRYIQELSLRDCIDLLTGCTS FEVNLLSRSSFSTTFDTLRALSEYGHKLVACAIPRTSIEEQTFEESGVCCGIPYAILKTD ACQKNGAHYAFLIQVAAPSSERALKYAFEYEMYKTEEVNGNRVLWMTFEDFAATFERIFL LLWPFDDAVSDHKTTVEFQVASESLSAASQFAKNPSFLIQNKGRNSSAVMVSLSASSASD ATIGAECLFYKAANTENGASLRRYNVCEGNAFFGSEVFEGNEGSVFFNLLPTERLQMTLS SRVPSSFRIRISSVENVDAMQLPDIMASSTFSSKWNTLFKAKRFSDDIFQLNRISVGCTL SLVLALSQNTGSSPPFPLGVLGWKGTSIDVVDATKPHFSTQQERSTVCVHSFLLTLAAGE SFFLLPYCCGSRCPDDYDLTVFCKESFTQSSVKTASVLRCTKT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_181070.1537 SLSASSASDA0.996unspLdBPK_181070.1537 SLSASSASDA0.996unspLdBPK_181070.1537 SLSASSASDA0.996unspLdBPK_181070.1612 SRIRISSVEN0.993unspLdBPK_181070.1613 SIRISSVENV0.995unspLdBPK_181070.1382 SLRALSEYGH0.997unspLdBPK_181070.1397 SIPRTSIEEQ0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India