LdBPK_191620.1 | ATP-dependent zinc metallopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      GO:0004222      

  • Computed_GO_Functions:  ATP binding      metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_191620.1OTHER0.9999590.0000170.000024
No Results

  • Fasta :-

    >LdBPK_191620.1 MDPLQREASKNGEEGAAGAERPSYFRGFFDAEKRRKVVNHDPTVGQAIGGAVVMALPVAL IIVLVMRRHARLATQEASGAAPKEGGFFSEMQKMMRQTMNPMGEKNFKVSVKDTKFSDVI GVPEALAEVQQYVNFLKTPQVFTRLGGRLPKGCILTGEPGTGKTLLAKAVAGEASVPFYS CSGADFIEVYAGSGPKRVRELFAAAKKDAPSVIFIDEIDAVGSRSSGNGAMGLSSEENRT INQLLAELDGLQPNEAVVVFAATNFVDSLDKALLREGRFDRKVEIPMPDRQARQDLFNHY LSRIACEDAGSLSKKLAELTPGVSPATIAAIVNEGALSAAIKDKAVVAAVDLLPAIDDVL VGKKHRSRMSDDAARRVALHESGHALVAWLLPEQTDVVKISITPRGPAGGFTQQVGREVL DMATEFSLFTDICVMLGGRLAEMTQHESLTTGTQDDYQRATQTAIREFLAFGMSRQVGLL SYEPQRLSEGRMHQKHSEAAHKMAEEEAARLVAAASDHVKMLLRSHDALLQKLAASLFER KELLREDIEAIVGPRPGTSSAVSEQTRAALRRFVDASEAAALQRQTAREAMCATLSTA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_191620.1.fa Sequence name : LdBPK_191620 Sequence length : 598 VALUES OF COMPUTED PARAMETERS Coef20 : 2.768 CoefTot : 0.000 ChDiff : -3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.353 2.859 0.498 0.911 MesoH : -0.401 0.528 -0.288 0.248 MuHd_075 : 17.230 8.612 5.052 4.703 MuHd_095 : 45.066 21.653 11.346 7.757 MuHd_100 : 39.398 16.870 9.554 6.893 MuHd_105 : 28.799 10.965 6.719 5.423 Hmax_075 : -0.400 1.500 -1.416 2.680 Hmax_095 : 7.300 5.000 -0.201 3.160 Hmax_100 : 7.300 5.000 -0.201 3.090 Hmax_105 : -5.700 -3.325 -3.382 0.928 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9865 0.0135 DFMC : 0.9899 0.0101
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 598 LdBPK_191620.1 MDPLQREASKNGEEGAAGAERPSYFRGFFDAEKRRKVVNHDPTVGQAIGGAVVMALPVALIIVLVMRRHARLATQEASGA 80 APKEGGFFSEMQKMMRQTMNPMGEKNFKVSVKDTKFSDVIGVPEALAEVQQYVNFLKTPQVFTRLGGRLPKGCILTGEPG 160 TGKTLLAKAVAGEASVPFYSCSGADFIEVYAGSGPKRVRELFAAAKKDAPSVIFIDEIDAVGSRSSGNGAMGLSSEENRT 240 INQLLAELDGLQPNEAVVVFAATNFVDSLDKALLREGRFDRKVEIPMPDRQARQDLFNHYLSRIACEDAGSLSKKLAELT 320 PGVSPATIAAIVNEGALSAAIKDKAVVAAVDLLPAIDDVLVGKKHRSRMSDDAARRVALHESGHALVAWLLPEQTDVVKI 400 SITPRGPAGGFTQQVGREVLDMATEFSLFTDICVMLGGRLAEMTQHESLTTGTQDDYQRATQTAIREFLAFGMSRQVGLL 480 SYEPQRLSEGRMHQKHSEAAHKMAEEEAARLVAAASDHVKMLLRSHDALLQKLAASLFERKELLREDIEAIVGPRPGTSS 560 AVSEQTRAALRRFVDASEAAALQRQTAREAMCATLSTA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...........P.......................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_191620.1 6 -MDPLQR|EA 0.104 . LdBPK_191620.1 10 LQREASK|NG 0.072 . LdBPK_191620.1 21 GAAGAER|PS 0.081 . LdBPK_191620.1 26 ERPSYFR|GF 0.111 . LdBPK_191620.1 33 GFFDAEK|RR 0.055 . LdBPK_191620.1 34 FFDAEKR|RK 0.092 . LdBPK_191620.1 35 FDAEKRR|KV 0.234 . LdBPK_191620.1 36 DAEKRRK|VV 0.094 . LdBPK_191620.1 67 IIVLVMR|RH 0.076 . LdBPK_191620.1 68 IVLVMRR|HA 0.121 . LdBPK_191620.1 71 VMRRHAR|LA 0.458 . LdBPK_191620.1 83 ASGAAPK|EG 0.066 . LdBPK_191620.1 93 FFSEMQK|MM 0.067 . LdBPK_191620.1 96 EMQKMMR|QT 0.090 . LdBPK_191620.1 105 MNPMGEK|NF 0.059 . LdBPK_191620.1 108 MGEKNFK|VS 0.060 . LdBPK_191620.1 112 NFKVSVK|DT 0.076 . LdBPK_191620.1 115 VSVKDTK|FS 0.077 . LdBPK_191620.1 137 QYVNFLK|TP 0.057 . LdBPK_191620.1 144 TPQVFTR|LG 0.128 . LdBPK_191620.1 148 FTRLGGR|LP 0.073 . LdBPK_191620.1 151 LGGRLPK|GC 0.110 . LdBPK_191620.1 163 GEPGTGK|TL 0.058 . LdBPK_191620.1 168 GKTLLAK|AV 0.076 . LdBPK_191620.1 196 YAGSGPK|RV 0.069 . LdBPK_191620.1 197 AGSGPKR|VR 0.149 . LdBPK_191620.1 199 SGPKRVR|EL 0.095 . LdBPK_191620.1 206 ELFAAAK|KD 0.061 . LdBPK_191620.1 207 LFAAAKK|DA 0.127 . LdBPK_191620.1 224 IDAVGSR|SS 0.182 . LdBPK_191620.1 239 LSSEENR|TI 0.131 . LdBPK_191620.1 271 FVDSLDK|AL 0.056 . LdBPK_191620.1 275 LDKALLR|EG 0.071 . LdBPK_191620.1 278 ALLREGR|FD 0.300 . LdBPK_191620.1 281 REGRFDR|KV 0.439 . LdBPK_191620.1 282 EGRFDRK|VE 0.071 . LdBPK_191620.1 290 EIPMPDR|QA 0.092 . LdBPK_191620.1 293 MPDRQAR|QD 0.250 . LdBPK_191620.1 303 FNHYLSR|IA 0.105 . LdBPK_191620.1 314 DAGSLSK|KL 0.058 . LdBPK_191620.1 315 AGSLSKK|LA 0.144 . LdBPK_191620.1 342 ALSAAIK|DK 0.080 . LdBPK_191620.1 344 SAAIKDK|AV 0.111 . LdBPK_191620.1 363 DDVLVGK|KH 0.059 . LdBPK_191620.1 364 DVLVGKK|HR 0.075 . LdBPK_191620.1 366 LVGKKHR|SR 0.111 . LdBPK_191620.1 368 GKKHRSR|MS 0.146 . LdBPK_191620.1 375 MSDDAAR|RV 0.116 . LdBPK_191620.1 376 SDDAARR|VA 0.113 . LdBPK_191620.1 399 EQTDVVK|IS 0.058 . LdBPK_191620.1 405 KISITPR|GP 0.141 . LdBPK_191620.1 417 FTQQVGR|EV 0.118 . LdBPK_191620.1 439 CVMLGGR|LA 0.087 . LdBPK_191620.1 459 TQDDYQR|AT 0.116 . LdBPK_191620.1 466 ATQTAIR|EF 0.080 . LdBPK_191620.1 475 LAFGMSR|QV 0.105 . LdBPK_191620.1 486 LSYEPQR|LS 0.098 . LdBPK_191620.1 491 QRLSEGR|MH 0.095 . LdBPK_191620.1 495 EGRMHQK|HS 0.086 . LdBPK_191620.1 502 HSEAAHK|MA 0.082 . LdBPK_191620.1 510 AEEEAAR|LV 0.108 . LdBPK_191620.1 520 AASDHVK|ML 0.074 . LdBPK_191620.1 524 HVKMLLR|SH 0.121 . LdBPK_191620.1 532 HDALLQK|LA 0.062 . LdBPK_191620.1 540 AASLFER|KE 0.080 . LdBPK_191620.1 541 ASLFERK|EL 0.068 . LdBPK_191620.1 545 ERKELLR|ED 0.087 . LdBPK_191620.1 555 EAIVGPR|PG 0.075 . LdBPK_191620.1 567 AVSEQTR|AA 0.105 . LdBPK_191620.1 571 QTRAALR|RF 0.077 . LdBPK_191620.1 572 TRAALRR|FV 0.623 *ProP* LdBPK_191620.1 584 EAAALQR|QT 0.095 . LdBPK_191620.1 588 LQRQTAR|EA 0.131 . ____________________________^_________________

  • Fasta :-

    >LdBPK_191620.1 ATGGATCCTCTGCAACGGGAGGCGTCCAAGAACGGTGAGGAGGGGGCGGCGGGGGCAGAG AGGCCCTCCTACTTCCGCGGCTTCTTCGACGCAGAGAAGCGCCGCAAGGTGGTCAACCAT GACCCTACCGTAGGCCAGGCCATTGGCGGCGCCGTTGTAATGGCACTCCCGGTGGCGCTC ATCATAGTTTTGGTGATGCGTCGACACGCGCGCCTCGCCACTCAGGAGGCGTCCGGCGCC GCGCCGAAGGAGGGCGGCTTCTTCAGCGAGATGCAGAAAATGATGCGGCAGACCATGAAT CCGATGGGTGAGAAGAACTTCAAGGTGTCGGTGAAGGACACGAAGTTTAGCGACGTCATC GGTGTACCAGAGGCACTGGCAGAGGTACAGCAGTACGTCAACTTCCTGAAGACGCCGCAA GTTTTCACCCGGCTCGGCGGCCGCCTACCGAAGGGTTGCATTCTCACAGGAGAGCCCGGC ACCGGCAAGACGCTGCTCGCAAAGGCGGTGGCCGGCGAGGCGAGCGTTCCCTTCTACAGC TGCAGTGGTGCTGACTTCATCGAGGTGTACGCCGGCTCCGGACCAAAGCGAGTGCGCGAG CTCTTCGCGGCGGCCAAGAAAGATGCCCCGTCTGTTATCTTCATCGACGAGATCGACGCC GTCGGCTCGCGCAGCAGCGGGAACGGTGCGATGGGTCTCAGCAGCGAGGAGAATCGAACC ATCAATCAACTGCTGGCCGAGCTGGACGGGCTGCAACCGAACGAGGCGGTTGTCGTGTTC GCGGCTACGAACTTTGTGGACAGCCTAGACAAGGCACTCCTGCGCGAGGGCCGCTTTGAC CGCAAGGTCGAGATCCCGATGCCGGACAGGCAGGCTCGCCAGGACCTCTTCAACCACTAT CTTAGCCGCATCGCCTGCGAGGATGCCGGGTCGCTCTCGAAGAAACTGGCCGAGCTGACT CCTGGAGTGTCGCCAGCCACCATCGCAGCCATCGTCAACGAAGGTGCTCTCAGCGCCGCC ATAAAGGACAAAGCCGTCGTCGCCGCCGTGGACCTCCTCCCCGCGATTGACGACGTACTC GTCGGCAAGAAGCACCGCAGTCGCATGAGCGACGATGCTGCGAGAAGGGTGGCACTACAT GAGAGCGGCCACGCACTCGTGGCATGGCTGCTGCCAGAGCAGACAGACGTGGTCAAGATC TCCATCACGCCGCGCGGCCCCGCCGGAGGCTTCACCCAGCAGGTCGGCCGCGAGGTGTTG GACATGGCGACTGAGTTTTCGCTCTTCACGGACATTTGCGTCATGCTGGGTGGGCGGCTG GCGGAGATGACGCAGCACGAGTCCCTCACCACTGGTACTCAGGACGACTACCAGCGGGCG ACTCAGACGGCCATTCGTGAGTTCCTTGCGTTTGGTATGTCTCGCCAGGTCGGTCTCCTC TCGTACGAGCCGCAGCGACTCAGCGAGGGTCGCATGCACCAGAAGCACTCGGAGGCAGCG CATAAGATGGCGGAGGAGGAGGCGGCCCGGCTGGTCGCTGCCGCGTCTGATCACGTGAAG ATGCTCTTGCGGTCTCATGATGCACTACTGCAGAAGCTCGCGGCTTCGCTCTTCGAGAGG AAGGAACTGCTGCGCGAGGATATAGAAGCGATTGTGGGTCCACGCCCTGGAACCAGCTCG GCCGTGTCGGAGCAGACGCGTGCGGCACTTCGCCGCTTCGTCGACGCGTCTGAAGCCGCA GCGCTGCAACGCCAGACCGCAAGAGAGGCGATGTGTGCCACCCTTTCTACTGCGTAA
  • Download Fasta

  • Fasta :-

    MDPLQREASKNGEEGAAGAERPSYFRGFFDAEKRRKVVNHDPTVGQAIGGAVVMALPVAL IIVLVMRRHARLATQEASGAAPKEGGFFSEMQKMMRQTMNPMGEKNFKVSVKDTKFSDVI GVPEALAEVQQYVNFLKTPQVFTRLGGRLPKGCILTGEPGTGKTLLAKAVAGEASVPFYS CSGADFIEVYAGSGPKRVRELFAAAKKDAPSVIFIDEIDAVGSRSSGNGAMGLSSEENRT INQLLAELDGLQPNEAVVVFAATNFVDSLDKALLREGRFDRKVEIPMPDRQARQDLFNHY LSRIACEDAGSLSKKLAELTPGVSPATIAAIVNEGALSAAIKDKAVVAAVDLLPAIDDVL VGKKHRSRMSDDAARRVALHESGHALVAWLLPEQTDVVKISITPRGPAGGFTQQVGREVL DMATEFSLFTDICVMLGGRLAEMTQHESLTTGTQDDYQRATQTAIREFLAFGMSRQVGLL SYEPQRLSEGRMHQKHSEAAHKMAEEEAARLVAAASDHVKMLLRSHDALLQKLAASLFER KELLREDIEAIVGPRPGTSSAVSEQTRAALRRFVDASEAAALQRQTAREAMCATLSTA

  • title: ATP binding site
  • coordinates: E158,P159,G160,T161,G162,K163,T164,L165,D216,N264
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_191620.1234 SAMGLSSEEN0.99unspLdBPK_191620.1234 SAMGLSSEEN0.99unspLdBPK_191620.1234 SAMGLSSEEN0.99unspLdBPK_191620.1370 SRSRMSDDAA0.99unspLdBPK_191620.1586 TLQRQTAREA0.992unspLdBPK_191620.123 SAERPSYFRG0.993unspLdBPK_191620.1110 SNFKVSVKDT0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India