LdBPK_201240.1 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_201240.1OTHER0.9999620.0000120.000026
No Results

  • Fasta :-

    >LdBPK_201240.1 MFDEFREDSVEPLPMDASKSSSTPWVNWGPSIDGEATPCFKGGFLYRIIDSKKKVWALYN DTFVYEMHATFIFGPVSNMEPITASLSASESGGEVDDKNRVVASVEGNELTISMVVYPME TIEFARGDKSKYRCHFDGKPLSKEYLQRETALANAELERNKVTLARFIHTSTDPEDVLAL CKKHRLTFIDPSFPPGQHSLDGDRGLIAPSGWRRPEAYLPLALKGQIRLFRHRVTPSATQ RGELGNSWVVSAMAALAEHPDYIKDMFRHPISSEETQRDEAVGAYRAWLNKDGLWSSVLV DSYLPVVGKQQRYARSANGPCEMWVSYLEKVYAKRYHSYSNIAGGDPLFAIRDFTGFPTA RLDVRFRECVTDPVKSDMFFLRMVRDYESGHLVLLSTPGSGDPRSAHSTYKEKGIFVGYA YSVLEARAIELPTLRRKKVPPLRLLRLRNAWEAATKWSGRWSDDSPMWQAHPEACVAFPQ HSGNDGTFIMEWSEVLEIFVGCGVVFNHFGYADYRIPFEFRGSVPDLCLEIHVTEPTTLT LILSQPDSKGTVRESEDYNPVMISIAGASSATTSPVSQNGSKRSSGTSSHSMMTASTQLV ARDYSLLVNSSADAETPSKSFTFLQGRDISAIYTFVPEQSPYLAVPRLLVQQSSGSNGTR ASSAAATSASNSAVTCPCVLGVLSQLAFTPNGQAHVRLRKLPANSLVFDNYLSFANDSVE VEKTFYVKRSATGVAERSASELQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_201240.1.fa Sequence name : LdBPK_201240 Sequence length : 743 VALUES OF COMPUTED PARAMETERS Coef20 : 3.311 CoefTot : 0.000 ChDiff : -6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.576 1.629 0.366 0.622 MesoH : 0.096 0.356 -0.175 0.287 MuHd_075 : 25.907 11.395 6.200 2.796 MuHd_095 : 30.879 19.300 8.268 4.669 MuHd_100 : 20.483 13.844 5.832 3.066 MuHd_105 : 17.514 7.036 3.773 1.977 Hmax_075 : 15.750 9.800 0.992 4.107 Hmax_095 : 5.600 10.500 -0.234 3.325 Hmax_100 : 4.800 5.400 -1.260 3.180 Hmax_105 : 5.400 3.500 -1.747 2.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9519 0.0481 DFMC : 0.9671 0.0329
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 743 LdBPK_201240.1 MFDEFREDSVEPLPMDASKSSSTPWVNWGPSIDGEATPCFKGGFLYRIIDSKKKVWALYNDTFVYEMHATFIFGPVSNME 80 PITASLSASESGGEVDDKNRVVASVEGNELTISMVVYPMETIEFARGDKSKYRCHFDGKPLSKEYLQRETALANAELERN 160 KVTLARFIHTSTDPEDVLALCKKHRLTFIDPSFPPGQHSLDGDRGLIAPSGWRRPEAYLPLALKGQIRLFRHRVTPSATQ 240 RGELGNSWVVSAMAALAEHPDYIKDMFRHPISSEETQRDEAVGAYRAWLNKDGLWSSVLVDSYLPVVGKQQRYARSANGP 320 CEMWVSYLEKVYAKRYHSYSNIAGGDPLFAIRDFTGFPTARLDVRFRECVTDPVKSDMFFLRMVRDYESGHLVLLSTPGS 400 GDPRSAHSTYKEKGIFVGYAYSVLEARAIELPTLRRKKVPPLRLLRLRNAWEAATKWSGRWSDDSPMWQAHPEACVAFPQ 480 HSGNDGTFIMEWSEVLEIFVGCGVVFNHFGYADYRIPFEFRGSVPDLCLEIHVTEPTTLTLILSQPDSKGTVRESEDYNP 560 VMISIAGASSATTSPVSQNGSKRSSGTSSHSMMTASTQLVARDYSLLVNSSADAETPSKSFTFLQGRDISAIYTFVPEQS 640 PYLAVPRLLVQQSSGSNGTRASSAAATSASNSAVTCPCVLGVLSQLAFTPNGQAHVRLRKLPANSLVFDNYLSFANDSVE 720 VEKTFYVKRSATGVAERSASELQ 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..........................................................................P..... 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ......................P......................................................... 640 ................................................................................ 720 ....................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ LdBPK_201240.1 6 -MFDEFR|ED 0.079 . LdBPK_201240.1 19 LPMDASK|SS 0.097 . LdBPK_201240.1 41 EATPCFK|GG 0.056 . LdBPK_201240.1 47 KGGFLYR|II 0.109 . LdBPK_201240.1 52 YRIIDSK|KK 0.063 . LdBPK_201240.1 53 RIIDSKK|KV 0.138 . LdBPK_201240.1 54 IIDSKKK|VW 0.089 . LdBPK_201240.1 98 GGEVDDK|NR 0.057 . LdBPK_201240.1 100 EVDDKNR|VV 0.113 . LdBPK_201240.1 126 ETIEFAR|GD 0.093 . LdBPK_201240.1 129 EFARGDK|SK 0.145 . LdBPK_201240.1 131 ARGDKSK|YR 0.081 . LdBPK_201240.1 133 GDKSKYR|CH 0.125 . LdBPK_201240.1 139 RCHFDGK|PL 0.077 . LdBPK_201240.1 143 DGKPLSK|EY 0.065 . LdBPK_201240.1 148 SKEYLQR|ET 0.094 . LdBPK_201240.1 159 ANAELER|NK 0.075 . LdBPK_201240.1 161 AELERNK|VT 0.057 . LdBPK_201240.1 166 NKVTLAR|FI 0.152 . LdBPK_201240.1 182 DVLALCK|KH 0.051 . LdBPK_201240.1 183 VLALCKK|HR 0.087 . LdBPK_201240.1 185 ALCKKHR|LT 0.100 . LdBPK_201240.1 204 HSLDGDR|GL 0.076 . LdBPK_201240.1 213 IAPSGWR|RP 0.077 . LdBPK_201240.1 214 APSGWRR|PE 0.126 . LdBPK_201240.1 224 YLPLALK|GQ 0.058 . LdBPK_201240.1 228 ALKGQIR|LF 0.082 . LdBPK_201240.1 231 GQIRLFR|HR 0.174 . LdBPK_201240.1 233 IRLFRHR|VT 0.083 . LdBPK_201240.1 241 TPSATQR|GE 0.102 . LdBPK_201240.1 264 EHPDYIK|DM 0.061 . LdBPK_201240.1 268 YIKDMFR|HP 0.098 . LdBPK_201240.1 278 SSEETQR|DE 0.093 . LdBPK_201240.1 286 EAVGAYR|AW 0.084 . LdBPK_201240.1 291 YRAWLNK|DG 0.066 . LdBPK_201240.1 309 YLPVVGK|QQ 0.064 . LdBPK_201240.1 312 VVGKQQR|YA 0.119 . LdBPK_201240.1 315 KQQRYAR|SA 0.566 *ProP* LdBPK_201240.1 330 WVSYLEK|VY 0.070 . LdBPK_201240.1 334 LEKVYAK|RY 0.062 . LdBPK_201240.1 335 EKVYAKR|YH 0.175 . LdBPK_201240.1 352 DPLFAIR|DF 0.092 . LdBPK_201240.1 361 TGFPTAR|LD 0.082 . LdBPK_201240.1 365 TARLDVR|FR 0.110 . LdBPK_201240.1 367 RLDVRFR|EC 0.076 . LdBPK_201240.1 375 CVTDPVK|SD 0.068 . LdBPK_201240.1 382 SDMFFLR|MV 0.267 . LdBPK_201240.1 385 FFLRMVR|DY 0.220 . LdBPK_201240.1 404 PGSGDPR|SA 0.181 . LdBPK_201240.1 411 SAHSTYK|EK 0.078 . LdBPK_201240.1 413 HSTYKEK|GI 0.079 . LdBPK_201240.1 427 YSVLEAR|AI 0.083 . LdBPK_201240.1 435 IELPTLR|RK 0.059 . LdBPK_201240.1 436 ELPTLRR|KK 0.087 . LdBPK_201240.1 437 LPTLRRK|KV 0.090 . LdBPK_201240.1 438 PTLRRKK|VP 0.124 . LdBPK_201240.1 443 KKVPPLR|LL 0.077 . LdBPK_201240.1 446 PPLRLLR|LR 0.158 . LdBPK_201240.1 448 LRLLRLR|NA 0.102 . LdBPK_201240.1 456 AWEAATK|WS 0.070 . LdBPK_201240.1 460 ATKWSGR|WS 0.149 . LdBPK_201240.1 515 FGYADYR|IP 0.082 . LdBPK_201240.1 521 RIPFEFR|GS 0.088 . LdBPK_201240.1 549 LSQPDSK|GT 0.065 . LdBPK_201240.1 553 DSKGTVR|ES 0.105 . LdBPK_201240.1 582 VSQNGSK|RS 0.060 . LdBPK_201240.1 583 SQNGSKR|SS 0.633 *ProP* LdBPK_201240.1 602 STQLVAR|DY 0.137 . LdBPK_201240.1 619 DAETPSK|SF 0.065 . LdBPK_201240.1 627 FTFLQGR|DI 0.141 . LdBPK_201240.1 647 PYLAVPR|LL 0.082 . LdBPK_201240.1 660 SGSNGTR|AS 0.140 . LdBPK_201240.1 697 NGQAHVR|LR 0.070 . LdBPK_201240.1 699 QAHVRLR|KL 0.093 . LdBPK_201240.1 700 AHVRLRK|LP 0.128 . LdBPK_201240.1 723 DSVEVEK|TF 0.065 . LdBPK_201240.1 728 EKTFYVK|RS 0.061 . LdBPK_201240.1 729 KTFYVKR|SA 0.451 . LdBPK_201240.1 737 ATGVAER|SA 0.181 . ____________________________^_________________

  • Fasta :-

    >LdBPK_201240.1 ATGTTCGATGAGTTTCGTGAGGACTCGGTAGAGCCGCTACCAATGGATGCCAGTAAGAGC TCATCAACGCCATGGGTGAACTGGGGGCCGTCCATCGACGGCGAGGCTACGCCATGCTTC AAAGGCGGTTTTCTCTATCGGATTATCGATTCCAAGAAGAAAGTCTGGGCTCTGTATAAC GACACGTTCGTCTACGAAATGCATGCCACCTTTATTTTCGGGCCTGTGTCGAATATGGAG CCCATCACCGCCTCGCTCTCTGCGTCGGAGAGCGGCGGCGAGGTGGATGACAAGAACCGC GTCGTCGCCAGCGTTGAGGGCAACGAGCTAACGATCTCCATGGTTGTTTATCCGATGGAG ACGATCGAGTTCGCCCGGGGCGACAAGTCGAAGTACAGATGCCACTTCGACGGCAAGCCG CTCTCAAAAGAGTACCTTCAACGCGAAACAGCCTTGGCAAACGCCGAGCTAGAAAGGAAC AAGGTGACGCTCGCGAGGTTCATCCACACCTCCACAGATCCTGAGGATGTGCTGGCGTTG TGCAAAAAACACCGTTTGACGTTTATCGACCCTTCCTTCCCTCCTGGCCAGCACTCGCTT GACGGGGATCGAGGCCTGATTGCGCCGAGCGGGTGGAGGCGCCCAGAGGCGTATCTGCCT CTCGCGTTGAAGGGTCAAATTCGTCTGTTTCGGCACCGTGTGACCCCCTCGGCCACACAG CGTGGCGAATTGGGCAATTCGTGGGTGGTGAGCGCCATGGCGGCGCTGGCGGAACACCCG GACTACATCAAGGATATGTTTCGGCACCCCATCAGCTCTGAAGAGACGCAGCGAGACGAG GCGGTTGGGGCATACCGGGCTTGGCTGAACAAAGACGGTCTCTGGAGCTCGGTACTCGTC GACAGCTATCTGCCCGTGGTGGGCAAGCAGCAGCGCTACGCCCGCAGCGCCAACGGGCCG TGCGAGATGTGGGTGTCGTATCTCGAGAAGGTGTATGCGAAGCGTTATCACAGCTACAGC AACATCGCCGGCGGCGATCCGCTCTTTGCAATTCGCGACTTTACCGGATTTCCCACGGCG CGGCTGGACGTCCGCTTTCGCGAGTGTGTTACGGACCCGGTGAAGAGCGATATGTTTTTC CTTCGCATGGTACGCGACTACGAGAGCGGGCACCTTGTGCTACTGAGCACTCCCGGCAGC GGTGACCCGCGCTCTGCCCATAGCACATACAAGGAGAAGGGCATTTTTGTGGGCTACGCC TATTCAGTGCTAGAAGCTCGCGCGATTGAATTGCCGACGCTGCGGCGGAAGAAGGTGCCA CCGCTGCGGCTGCTGCGGCTGCGCAACGCGTGGGAGGCGGCGACCAAGTGGAGTGGCAGG TGGTCTGACGACTCGCCGATGTGGCAGGCGCACCCGGAAGCGTGTGTTGCGTTTCCGCAG CACAGCGGGAATGATGGAACTTTCATCATGGAGTGGTCGGAGGTGCTGGAGATCTTTGTC GGCTGCGGTGTTGTGTTCAACCACTTCGGCTACGCGGACTACCGCATCCCCTTCGAGTTC CGGGGCTCTGTGCCGGACCTGTGTCTCGAGATTCACGTGACGGAGCCGACAACGTTGACG CTCATTCTGTCGCAGCCAGACAGCAAAGGCACGGTGAGGGAGTCGGAGGACTACAACCCT GTCATGATCTCCATAGCGGGCGCCTCCTCCGCCACGACGAGCCCGGTTTCCCAGAATGGC AGCAAGCGTAGTAGCGGGACCTCCAGCCACTCCATGATGACGGCCAGTACGCAGCTGGTG GCGCGCGATTACTCTCTCCTCGTCAATTCCTCTGCGGACGCCGAGACGCCGTCAAAGAGC TTCACGTTCTTGCAGGGCCGCGACATAAGCGCCATATACACGTTCGTCCCAGAGCAGTCG CCGTACCTCGCCGTGCCACGTCTGCTTGTGCAGCAGTCTAGCGGCAGCAACGGCACGAGG GCGTCCAGTGCAGCTGCGACCTCGGCATCAAACAGCGCTGTGACGTGTCCATGCGTGCTC GGCGTTCTTTCGCAGCTTGCCTTTACCCCAAACGGACAGGCACACGTTCGTCTGCGCAAG TTGCCAGCGAACAGTCTCGTCTTTGACAACTACCTCAGCTTCGCCAACGACTCCGTGGAG GTCGAGAAGACCTTCTACGTGAAACGCTCCGCCACCGGTGTGGCGGAGCGCAGCGCCTCA GAACTACAGTAG
  • Download Fasta

  • Fasta :-

    MFDEFREDSVEPLPMDASKSSSTPWVNWGPSIDGEATPCFKGGFLYRIIDSKKKVWALYN DTFVYEMHATFIFGPVSNMEPITASLSASESGGEVDDKNRVVASVEGNELTISMVVYPME TIEFARGDKSKYRCHFDGKPLSKEYLQRETALANAELERNKVTLARFIHTSTDPEDVLAL CKKHRLTFIDPSFPPGQHSLDGDRGLIAPSGWRRPEAYLPLALKGQIRLFRHRVTPSATQ RGELGNSWVVSAMAALAEHPDYIKDMFRHPISSEETQRDEAVGAYRAWLNKDGLWSSVLV DSYLPVVGKQQRYARSANGPCEMWVSYLEKVYAKRYHSYSNIAGGDPLFAIRDFTGFPTA RLDVRFRECVTDPVKSDMFFLRMVRDYESGHLVLLSTPGSGDPRSAHSTYKEKGIFVGYA YSVLEARAIELPTLRRKKVPPLRLLRLRNAWEAATKWSGRWSDDSPMWQAHPEACVAFPQ HSGNDGTFIMEWSEVLEIFVGCGVVFNHFGYADYRIPFEFRGSVPDLCLEIHVTEPTTLT LILSQPDSKGTVRESEDYNPVMISIAGASSATTSPVSQNGSKRSSGTSSHSMMTASTQLV ARDYSLLVNSSADAETPSKSFTFLQGRDISAIYTFVPEQSPYLAVPRLLVQQSSGSNGTR ASSAAATSASNSAVTCPCVLGVLSQLAFTPNGQAHVRLRKLPANSLVFDNYLSFANDSVE VEKTFYVKRSATGVAERSASELQ

  • title: catalytic site
  • coordinates: S247,Y419,N449
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_201240.1272 SRHPISSEET0.996unspLdBPK_201240.1272 SRHPISSEET0.996unspLdBPK_201240.1272 SRHPISSEET0.996unspLdBPK_201240.1338 SKRYHSYSNI0.996unspLdBPK_201240.1408 SRSAHSTYKE0.994unspLdBPK_201240.1523 SEFRGSVPDL0.995unspLdBPK_201240.1577 STSPVSQNGS0.991unspLdBPK_201240.1585 SSKRSSGTSS0.997unspLdBPK_201240.19 SFREDSVEPL0.992unspLdBPK_201240.187 STASLSASES0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India