LdBPK_210460.1 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase, putative

UniProt_ID: E9BF31

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0036459
Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity
Computed_GO_Process_IDs: GO:0016579
Computed_GO_Processes: protein deubiquitination
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs: GO:0004197 GO:0004221
Curated_GO_Functions: cysteine-type endopeptidase activity obsolete ubiquitin thiolesterase activity
Curated_GO_Processes: ubiquitin-dependent protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	LdBPK_210460.1	OTHER	0.999987	0.000012	0.000000

No Results

Fasta :-
>LdBPK_210460.1 MGNETSKSSGTASASNPLRRNSQSEAAVGFGGAPAATEKAGSPNAASTAASVPSRPIALS AETPPLRSASGATDTVGSSVPRYVDAKSMVYTLPCFTPDRSLSSPTSGGAGPRSQPIAIQ MAASQQLPMMSSSSDFRVGAPSSPLSPSRRHFSAANLSNTMEIPTYNTSTPTAVEDLSCS SPVLKSYRQHSFSHSKRDACLADSPNSPDMSVHGGASLSAGASEAPVAMSLATSFSPGAG SGSPSTAIHTKFLEITGHPLGLENYGNTCYCNSVIQLIYHCAPLRLRLLELYHVYLTKKG KSGFEEDTVLFQLCSLIAVMHKSNNRTKDKYPREKIAPKELLNCVRAKNEVFNNDMQQDA HEFTMFLLNDIWDTEQRIMADPANVNLFLKHETSMKKKGSLSFSWKHSKDKHISSHSHKE NKLDKTTSAAATNSDAGANGGKAVDAQQPFSGELTPLQVILQGQFGSLTACLECENVTAR EEVFMDLSLETAQGTSLLRCLDHFGDPEYFWGKNKLRCEECKMPVRAAKTIHVQQLPQYA LLIHLKRFQYDVKKQIFTKKADHVALPMQMDVEEYLTDPEVVEQSLRNKLARSQKNIGVD AVSSTSGHNNSGSGQKDEANATSSTDTFKPASEEVRRKLRGVARHKARFELTGFVAHIGE GPNSGHYFTCVRYGPQLWRRFDDETVSTMAERDVKQYFGVPSDAVGVVTTTAYILLYERV A
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_210460.1.fa Sequence name : LdBPK_210460 Sequence length : 721 VALUES OF COMPUTED PARAMETERS Coef20 : 4.092 CoefTot : -0.198 ChDiff : 4 ZoneTo : 24 KR : 3 DE : 1 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.341 0.135 0.522 MesoH : 0.328 0.302 -0.157 0.280 MuHd_075 : 19.794 13.676 6.327 4.288 MuHd_095 : 28.233 11.312 7.333 5.390 MuHd_100 : 15.398 10.076 3.395 4.236 MuHd_105 : 21.026 13.228 5.414 4.615 Hmax_075 : 7.933 2.800 0.483 1.517 Hmax_095 : 7.000 1.200 0.352 1.780 Hmax_100 : -1.400 -1.400 -2.299 -0.010 Hmax_105 : 8.633 2.917 0.525 1.318 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6639 0.3361 DFMC : 0.6465 0.3535

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 721 LdBPK_210460.1 MGNETSKSSGTASASNPLRRNSQSEAAVGFGGAPAATEKAGSPNAASTAASVPSRPIALSAETPPLRSASGATDTVGSSV 80 PRYVDAKSMVYTLPCFTPDRSLSSPTSGGAGPRSQPIAIQMAASQQLPMMSSSSDFRVGAPSSPLSPSRRHFSAANLSNT 160 MEIPTYNTSTPTAVEDLSCSSPVLKSYRQHSFSHSKRDACLADSPNSPDMSVHGGASLSAGASEAPVAMSLATSFSPGAG 240 SGSPSTAIHTKFLEITGHPLGLENYGNTCYCNSVIQLIYHCAPLRLRLLELYHVYLTKKGKSGFEEDTVLFQLCSLIAVM 320 HKSNNRTKDKYPREKIAPKELLNCVRAKNEVFNNDMQQDAHEFTMFLLNDIWDTEQRIMADPANVNLFLKHETSMKKKGS 400 LSFSWKHSKDKHISSHSHKENKLDKTTSAAATNSDAGANGGKAVDAQQPFSGELTPLQVILQGQFGSLTACLECENVTAR 480 EEVFMDLSLETAQGTSLLRCLDHFGDPEYFWGKNKLRCEECKMPVRAAKTIHVQQLPQYALLIHLKRFQYDVKKQIFTKK 560 ADHVALPMQMDVEEYLTDPEVVEQSLRNKLARSQKNIGVDAVSSTSGHNNSGSGQKDEANATSSTDTFKPASEEVRRKLR 640 GVARHKARFELTGFVAHIGEGPNSGHYFTCVRYGPQLWRRFDDETVSTMAERDVKQYFGVPSDAVGVVTTTAYILLYERV 720 A 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 . 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_210460.1 7 MGNETSK|SS 0.101 . LdBPK_210460.1 19 SASNPLR|RN 0.168 . LdBPK_210460.1 20 ASNPLRR|NS 0.142 . LdBPK_210460.1 39 APAATEK|AG 0.070 . LdBPK_210460.1 55 AASVPSR|PI 0.112 . LdBPK_210460.1 67 AETPPLR|SA 0.183 . LdBPK_210460.1 82 VGSSVPR|YV 0.219 . LdBPK_210460.1 87 PRYVDAK|SM 0.093 . LdBPK_210460.1 100 PCFTPDR|SL 0.111 . LdBPK_210460.1 113 SGGAGPR|SQ 0.142 . LdBPK_210460.1 137 SSSSDFR|VG 0.090 . LdBPK_210460.1 149 SPLSPSR|RH 0.082 . LdBPK_210460.1 150 PLSPSRR|HF 0.271 . LdBPK_210460.1 185 CSSPVLK|SY 0.104 . LdBPK_210460.1 188 PVLKSYR|QH 0.081 . LdBPK_210460.1 196 HSFSHSK|RD 0.058 . LdBPK_210460.1 197 SFSHSKR|DA 0.443 . LdBPK_210460.1 251 STAIHTK|FL 0.097 . LdBPK_210460.1 285 YHCAPLR|LR 0.069 . LdBPK_210460.1 287 CAPLRLR|LL 0.068 . LdBPK_210460.1 298 YHVYLTK|KG 0.060 . LdBPK_210460.1 299 HVYLTKK|GK 0.120 . LdBPK_210460.1 301 YLTKKGK|SG 0.088 . LdBPK_210460.1 322 LIAVMHK|SN 0.079 . LdBPK_210460.1 326 MHKSNNR|TK 0.088 . LdBPK_210460.1 328 KSNNRTK|DK 0.098 . LdBPK_210460.1 330 NNRTKDK|YP 0.074 . LdBPK_210460.1 333 TKDKYPR|EK 0.090 . LdBPK_210460.1 335 DKYPREK|IA 0.073 . LdBPK_210460.1 339 REKIAPK|EL 0.064 . LdBPK_210460.1 346 ELLNCVR|AK 0.091 . LdBPK_210460.1 348 LNCVRAK|NE 0.068 . LdBPK_210460.1 377 IWDTEQR|IM 0.071 . LdBPK_210460.1 390 NVNLFLK|HE 0.060 . LdBPK_210460.1 396 KHETSMK|KK 0.065 . LdBPK_210460.1 397 HETSMKK|KG 0.085 . LdBPK_210460.1 398 ETSMKKK|GS 0.109 . LdBPK_210460.1 406 SLSFSWK|HS 0.088 . LdBPK_210460.1 409 FSWKHSK|DK 0.086 . LdBPK_210460.1 411 WKHSKDK|HI 0.086 . LdBPK_210460.1 419 ISSHSHK|EN 0.073 . LdBPK_210460.1 422 HSHKENK|LD 0.063 . LdBPK_210460.1 425 KENKLDK|TT 0.087 . LdBPK_210460.1 442 AGANGGK|AV 0.106 . LdBPK_210460.1 480 CENVTAR|EE 0.080 . LdBPK_210460.1 499 QGTSLLR|CL 0.084 . LdBPK_210460.1 513 PEYFWGK|NK 0.061 . LdBPK_210460.1 515 YFWGKNK|LR 0.059 . LdBPK_210460.1 517 WGKNKLR|CE 0.097 . LdBPK_210460.1 522 LRCEECK|MP 0.072 . LdBPK_210460.1 526 ECKMPVR|AA 0.100 . LdBPK_210460.1 529 MPVRAAK|TI 0.255 . LdBPK_210460.1 546 ALLIHLK|RF 0.057 . LdBPK_210460.1 547 LLIHLKR|FQ 0.240 . LdBPK_210460.1 553 RFQYDVK|KQ 0.058 . LdBPK_210460.1 554 FQYDVKK|QI 0.117 . LdBPK_210460.1 559 KKQIFTK|KA 0.084 . LdBPK_210460.1 560 KQIFTKK|AD 0.157 . LdBPK_210460.1 587 VVEQSLR|NK 0.060 . LdBPK_210460.1 589 EQSLRNK|LA 0.071 . LdBPK_210460.1 592 LRNKLAR|SQ 0.243 . LdBPK_210460.1 595 KLARSQK|NI 0.187 . LdBPK_210460.1 616 NSGSGQK|DE 0.068 . LdBPK_210460.1 629 SSTDTFK|PA 0.081 . LdBPK_210460.1 636 PASEEVR|RK 0.086 . LdBPK_210460.1 637 ASEEVRR|KL 0.159 . LdBPK_210460.1 638 SEEVRRK|LR 0.096 . LdBPK_210460.1 640 EVRRKLR|GV 0.381 . LdBPK_210460.1 644 KLRGVAR|HK 0.121 . LdBPK_210460.1 646 RGVARHK|AR 0.059 . LdBPK_210460.1 648 VARHKAR|FE 0.159 . LdBPK_210460.1 672 HYFTCVR|YG 0.072 . LdBPK_210460.1 679 YGPQLWR|RF 0.086 . LdBPK_210460.1 680 GPQLWRR|FD 0.238 . LdBPK_210460.1 692 VSTMAER|DV 0.172 . LdBPK_210460.1 695 MAERDVK|QY 0.135 . LdBPK_210460.1 719 YILLYER|VA 0.072 . ____________________________^_________________

Fasta :-
>LdBPK_210460.1 ATGGGTAACGAGACGTCCAAGTCCAGCGGCACGGCGTCGGCGAGCAACCCACTTCGCCGG AACTCGCAGTCGGAGGCGGCAGTGGGCTTCGGCGGTGCTCCCGCGGCGACAGAAAAGGCG GGATCGCCAAATGCTGCGAGCACCGCTGCATCGGTCCCCAGCCGTCCCATAGCGCTGTCG GCCGAGACGCCACCACTGAGATCGGCGAGTGGGGCCACGGACACCGTCGGCTCGTCAGTG CCGCGCTACGTGGATGCAAAGAGCATGGTGTACACCCTTCCCTGCTTTACCCCGGATAGG TCGCTGAGCAGCCCGACGAGCGGCGGCGCTGGTCCACGGAGCCAACCGATCGCAATACAG ATGGCTGCCTCACAGCAGCTGCCGATGATGTCCTCCAGCAGTGACTTCCGCGTGGGTGCG CCATCCTCGCCTCTCTCCCCATCCCGCCGGCACTTCTCCGCTGCGAATTTGTCGAACACG ATGGAGATTCCGACGTACAACACAAGCACCCCCACCGCCGTGGAGGACCTTTCCTGCAGC TCACCAGTGCTCAAATCGTACCGGCAGCACTCCTTCTCCCATTCGAAGCGGGATGCGTGT CTGGCCGACTCCCCCAACTCCCCAGACATGAGCGTCCACGGCGGCGCATCCCTCAGCGCC GGCGCCTCGGAGGCTCCGGTGGCGATGAGCCTGGCCACCTCGTTCTCACCTGGGGCTGGC AGCGGCTCGCCCAGCACAGCGATCCACACAAAGTTCCTCGAGATAACCGGGCACCCGCTG GGCTTGGAGAACTACGGCAACACTTGCTACTGCAACTCCGTCATCCAGCTGATCTACCAC TGCGCCCCATTGCGGCTGCGGCTGCTCGAGCTGTACCACGTCTACCTCACCAAGAAGGGT AAGTCTGGCTTCGAGGAGGACACGGTGCTCTTCCAGCTCTGCAGCCTCATCGCCGTTATG CACAAGTCGAACAACCGCACCAAGGACAAGTACCCGCGCGAGAAGATCGCCCCAAAAGAA CTGCTGAACTGCGTGCGCGCCAAGAACGAGGTCTTCAACAACGACATGCAGCAGGACGCA CACGAGTTCACCATGTTTCTGCTGAATGATATCTGGGACACGGAGCAGCGCATCATGGCC GACCCCGCCAACGTAAACCTCTTTCTCAAGCACGAGACATCCATGAAGAAGAAGGGGTCG TTGTCCTTCTCCTGGAAGCACAGCAAGGATAAGCACATCAGCAGCCACAGCCACAAGGAA AACAAGCTCGACAAGACAACCTCGGCAGCGGCCACCAACAGCGACGCCGGCGCGAACGGG GGCAAGGCGGTGGATGCACAGCAGCCCTTCAGCGGGGAGCTCACCCCTCTCCAGGTAATC CTGCAAGGCCAGTTCGGCTCCCTCACCGCCTGCCTCGAGTGCGAGAACGTGACCGCCCGA GAAGAGGTCTTCATGGACCTCAGCCTCGAGACGGCACAGGGCACGTCCCTCCTCCGCTGC CTCGACCACTTCGGTGACCCCGAGTACTTCTGGGGGAAGAACAAGCTGCGCTGCGAGGAG TGCAAGATGCCGGTGCGCGCCGCCAAGACGATCCACGTGCAGCAGCTGCCGCAGTACGCG CTCCTTATCCACCTGAAGCGCTTCCAGTACGACGTGAAGAAGCAGATCTTCACAAAGAAG GCGGACCACGTCGCACTGCCGATGCAGATGGACGTGGAGGAGTACCTGACGGACCCAGAG GTGGTCGAGCAGAGCCTGCGCAACAAGCTGGCGCGCTCGCAGAAGAACATCGGCGTTGAC GCGGTCAGCAGCACCAGCGGGCACAACAACAGCGGCAGCGGACAGAAAGACGAAGCGAAC GCGACTTCGTCGACCGACACATTCAAGCCGGCGTCGGAGGAGGTACGCCGCAAGCTTCGT GGCGTCGCCCGCCACAAGGCGCGCTTCGAGCTGACAGGTTTTGTCGCCCACATTGGCGAG GGACCAAACTCAGGGCACTACTTCACGTGTGTCCGTTACGGTCCTCAGCTGTGGCGCCGC TTCGACGACGAGACTGTGTCGACGATGGCGGAGCGAGATGTGAAGCAGTACTTTGGCGTT CCATCCGACGCTGTCGGCGTGGTCACGACGACGGCCTACATACTGCTCTACGAGCGCGTT GCGTAG
Download Fasta

Fasta :-

MGNETSKSSGTASASNPLRRNSQSEAAVGFGGAPAATEKAGSPNAASTAASVPSRPIALS AETPPLRSASGATDTVGSSVPRYVDAKSMVYTLPCFTPDRSLSSPTSGGAGPRSQPIAIQ MAASQQLPMMSSSSDFRVGAPSSPLSPSRRHFSAANLSNTMEIPTYNTSTPTAVEDLSCS SPVLKSYRQHSFSHSKRDACLADSPNSPDMSVHGGASLSAGASEAPVAMSLATSFSPGAG SGSPSTAIHTKFLEITGHPLGLENYGNTCYCNSVIQLIYHCAPLRLRLLELYHVYLTKKG KSGFEEDTVLFQLCSLIAVMHKSNNRTKDKYPREKIAPKELLNCVRAKNEVFNNDMQQDA HEFTMFLLNDIWDTEQRIMADPANVNLFLKHETSMKKKGSLSFSWKHSKDKHISSHSHKE NKLDKTTSAAATNSDAGANGGKAVDAQQPFSGELTPLQVILQGQFGSLTACLECENVTAR EEVFMDLSLETAQGTSLLRCLDHFGDPEYFWGKNKLRCEECKMPVRAAKTIHVQQLPQYA LLIHLKRFQYDVKKQIFTKKADHVALPMQMDVEEYLTDPEVVEQSLRNKLARSQKNIGVD AVSSTSGHNNSGSGQKDEANATSSTDTFKPASEEVRRKLRGVARHKARFELTGFVAHIGE GPNSGHYFTCVRYGPQLWRRFDDETVSTMAERDVKQYFGVPSDAVGVVTTTAYILLYERV A

Ubiquitin carboxyl-terminal hydrolase, UCH

title: Active Site
coordinates: N264,C269,H666,D683

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	LdBPK_210460.1	146 S	SSPLSPSRR	0.994	unsp	LdBPK_210460.1	146 S	SSPLSPSRR	0.994	unsp	LdBPK_210460.1	146 S	SSPLSPSRR	0.994	unsp	LdBPK_210460.1	191 S	YRQHSFSHS	0.995	unsp	LdBPK_210460.1	195 S	SFSHSKRDA	0.997	unsp	LdBPK_210460.1	207 S	DSPNSPDMS	0.993	unsp	LdBPK_210460.1	302 S	KKGKSGFEE	0.997	unsp	LdBPK_210460.1	404 S	SLSFSWKHS	0.995	unsp	LdBPK_210460.1	417 S	ISSHSHKEN	0.997	unsp	LdBPK_210460.1	623 S	ANATSSTDT	0.993	unsp	LdBPK_210460.1	22 S	LRRNSQSEA	0.998	unsp	LdBPK_210460.1	42 S	EKAGSPNAA	0.99	unsp

LdBPK_210460.1 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase, putative

ID's

UniProt_ID: E9BF31

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0036459

Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity

Computed_GO_Process_IDs: GO:0016579

Computed_GO_Processes: protein deubiquitination

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs: GO:0004197 GO:0004221

Curated_GO_Functions: cysteine-type endopeptidase activity obsolete ubiquitin thiolesterase activity

Curated_GO_Processes: ubiquitin-dependent protein catabolic process

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin carboxyl-terminal hydrolase, UCH

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India