LdBPK_251540.1 | calpain family cysteine protease-like protein

_IDPredictionOTHERSPmTPCS_Position
LdBPK_251540.1OTHER0.9999400.0000160.000045
No Results

  • Fasta :-

    >LdBPK_251540.1 MGNGCCGCCDAKPEYKLGRPLVSGKTTPCFNDGRLFKIVKGDIWYFYNDTQDYQMKVTAD FGNGSNIVAMSDTELVRKNDSGACTATVSVFPLETKAMVKTKEVNGFNVKYSGIAFTDAY RQKLRQKAAAQVSADLAEMRKLRERNPKVNNQNRLLKVARTMGKMYVDTSFPPTSQSLIR PGIDPDPDACLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALA ALAEHDAAIKGIFKNRHGCCIRSQERKHGAWRVNLNISGWWRTIIIDSYLPSVQLLPVFA RNRNHPNELWVSFAEKAYAKVFGSYQAIVAGYPWQALEDLTGFPAYDFGNMWRTAQTDTD TRKKLFDSLHWWNEKKYLICIATPSNGALKMAGKQRSANQLEALFEKAGLNIGHAYSVLD VKHFPLHRLCMLKIRNPWGSHVEWTGDWGDDSPLWNRYPFIKLACRPQKKADGIFWMEWR DVSKFFDSGSVCFRRGHWFRSWYDYRVIGSFEDLVCDTALLVIVNKTSQFPAYISLHQKD CRGLPTSDPDSKYACVMISISEGDINGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYK FTKAHKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKVSSEDVVVNIVRLDKNNAVFKNVA SFDAGTPTSLNTLYQIKDGNNVFRTYRSDNLRKGKKQHNAEFELVM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_251540.1.fa Sequence name : LdBPK_251540 Sequence length : 706 VALUES OF COMPUTED PARAMETERS Coef20 : 2.849 CoefTot : -0.884 ChDiff : 30 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.882 1.629 0.081 0.583 MesoH : -0.613 0.101 -0.427 0.220 MuHd_075 : 2.663 2.525 3.256 0.484 MuHd_095 : 8.214 9.825 4.274 1.133 MuHd_100 : 10.002 6.139 3.607 1.640 MuHd_105 : 17.000 8.137 5.378 3.640 Hmax_075 : 3.800 4.550 2.116 1.980 Hmax_095 : 3.675 6.738 3.135 2.021 Hmax_100 : 9.300 5.400 2.754 3.250 Hmax_105 : 2.600 3.800 2.332 3.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9949 0.0051 DFMC : 0.9954 0.0046
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 706 LdBPK_251540.1 MGNGCCGCCDAKPEYKLGRPLVSGKTTPCFNDGRLFKIVKGDIWYFYNDTQDYQMKVTADFGNGSNIVAMSDTELVRKND 80 SGACTATVSVFPLETKAMVKTKEVNGFNVKYSGIAFTDAYRQKLRQKAAAQVSADLAEMRKLRERNPKVNNQNRLLKVAR 160 TMGKMYVDTSFPPTSQSLIRPGIDPDPDACLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALA 240 ALAEHDAAIKGIFKNRHGCCIRSQERKHGAWRVNLNISGWWRTIIIDSYLPSVQLLPVFARNRNHPNELWVSFAEKAYAK 320 VFGSYQAIVAGYPWQALEDLTGFPAYDFGNMWRTAQTDTDTRKKLFDSLHWWNEKKYLICIATPSNGALKMAGKQRSANQ 400 LEALFEKAGLNIGHAYSVLDVKHFPLHRLCMLKIRNPWGSHVEWTGDWGDDSPLWNRYPFIKLACRPQKKADGIFWMEWR 480 DVSKFFDSGSVCFRRGHWFRSWYDYRVIGSFEDLVCDTALLVIVNKTSQFPAYISLHQKDCRGLPTSDPDSKYACVMISI 560 SEGDINGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYKFTKAHKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKVSSE 640 DVVVNIVRLDKNNAVFKNVASFDAGTPTSLNTLYQIKDGNNVFRTYRSDNLRKGKKQHNAEFELVM 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .................................................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_251540.1 12 CGCCDAK|PE 0.060 . LdBPK_251540.1 16 DAKPEYK|LG 0.059 . LdBPK_251540.1 19 PEYKLGR|PL 0.106 . LdBPK_251540.1 25 RPLVSGK|TT 0.064 . LdBPK_251540.1 34 PCFNDGR|LF 0.078 . LdBPK_251540.1 37 NDGRLFK|IV 0.198 . LdBPK_251540.1 40 RLFKIVK|GD 0.063 . LdBPK_251540.1 56 TQDYQMK|VT 0.077 . LdBPK_251540.1 77 SDTELVR|KN 0.084 . LdBPK_251540.1 78 DTELVRK|ND 0.077 . LdBPK_251540.1 96 VFPLETK|AM 0.054 . LdBPK_251540.1 100 ETKAMVK|TK 0.064 . LdBPK_251540.1 102 KAMVKTK|EV 0.093 . LdBPK_251540.1 110 VNGFNVK|YS 0.077 . LdBPK_251540.1 121 AFTDAYR|QK 0.066 . LdBPK_251540.1 123 TDAYRQK|LR 0.072 . LdBPK_251540.1 125 AYRQKLR|QK 0.110 . LdBPK_251540.1 127 RQKLRQK|AA 0.076 . LdBPK_251540.1 140 ADLAEMR|KL 0.082 . LdBPK_251540.1 141 DLAEMRK|LR 0.070 . LdBPK_251540.1 143 AEMRKLR|ER 0.244 . LdBPK_251540.1 145 MRKLRER|NP 0.080 . LdBPK_251540.1 148 LRERNPK|VN 0.153 . LdBPK_251540.1 154 KVNNQNR|LL 0.124 . LdBPK_251540.1 157 NQNRLLK|VA 0.175 . LdBPK_251540.1 160 RLLKVAR|TM 0.121 . LdBPK_251540.1 164 VARTMGK|MY 0.060 . LdBPK_251540.1 180 TSQSLIR|PG 0.105 . LdBPK_251540.1 192 DPDACLK|RP 0.056 . LdBPK_251540.1 193 PDACLKR|PE 0.167 . LdBPK_251540.1 200 PETIAWR|RP 0.074 . LdBPK_251540.1 201 ETIAWRR|PE 0.098 . LdBPK_251540.1 208 PEDFLPK|KW 0.067 . LdBPK_251540.1 209 EDFLPKK|WH 0.086 . LdBPK_251540.1 213 PKKWHPK|IR 0.064 . LdBPK_251540.1 215 KWHPKIR|LF 0.139 . LdBPK_251540.1 223 FGNISPK|DI 0.125 . LdBPK_251540.1 250 EHDAAIK|GI 0.068 . LdBPK_251540.1 254 AIKGIFK|NR 0.054 . LdBPK_251540.1 256 KGIFKNR|HG 0.116 . LdBPK_251540.1 262 RHGCCIR|SQ 0.131 . LdBPK_251540.1 266 CIRSQER|KH 0.091 . LdBPK_251540.1 267 IRSQERK|HG 0.098 . LdBPK_251540.1 272 RKHGAWR|VN 0.085 . LdBPK_251540.1 282 NISGWWR|TI 0.089 . LdBPK_251540.1 301 LLPVFAR|NR 0.077 . LdBPK_251540.1 303 PVFARNR|NH 0.073 . LdBPK_251540.1 316 WVSFAEK|AY 0.083 . LdBPK_251540.1 320 AEKAYAK|VF 0.070 . LdBPK_251540.1 353 DFGNMWR|TA 0.098 . LdBPK_251540.1 362 QTDTDTR|KK 0.059 . LdBPK_251540.1 363 TDTDTRK|KL 0.118 . LdBPK_251540.1 364 DTDTRKK|LF 0.077 . LdBPK_251540.1 375 LHWWNEK|KY 0.061 . LdBPK_251540.1 376 HWWNEKK|YL 0.112 . LdBPK_251540.1 390 PSNGALK|MA 0.104 . LdBPK_251540.1 394 ALKMAGK|QR 0.068 . LdBPK_251540.1 396 KMAGKQR|SA 0.319 . LdBPK_251540.1 407 LEALFEK|AG 0.065 . LdBPK_251540.1 422 YSVLDVK|HF 0.058 . LdBPK_251540.1 428 KHFPLHR|LC 0.076 . LdBPK_251540.1 433 HRLCMLK|IR 0.068 . LdBPK_251540.1 435 LCMLKIR|NP 0.088 . LdBPK_251540.1 457 DSPLWNR|YP 0.082 . LdBPK_251540.1 462 NRYPFIK|LA 0.073 . LdBPK_251540.1 466 FIKLACR|PQ 0.079 . LdBPK_251540.1 469 LACRPQK|KA 0.266 . LdBPK_251540.1 470 ACRPQKK|AD 0.120 . LdBPK_251540.1 480 IFWMEWR|DV 0.228 . LdBPK_251540.1 484 EWRDVSK|FF 0.080 . LdBPK_251540.1 494 SGSVCFR|RG 0.101 . LdBPK_251540.1 495 GSVCFRR|GH 0.115 . LdBPK_251540.1 500 RRGHWFR|SW 0.335 . LdBPK_251540.1 506 RSWYDYR|VI 0.124 . LdBPK_251540.1 526 LLVIVNK|TS 0.055 . LdBPK_251540.1 539 YISLHQK|DC 0.080 . LdBPK_251540.1 542 LHQKDCR|GL 0.117 . LdBPK_251540.1 552 TSDPDSK|YA 0.078 . LdBPK_251540.1 571 INGSQQK|VV 0.070 . LdBPK_251540.1 593 YLFQESR|SV 0.151 . LdBPK_251540.1 600 SVSLYYK|FT 0.074 . LdBPK_251540.1 603 LYYKFTK|AH 0.060 . LdBPK_251540.1 606 KFTKAHK|YL 0.061 . LdBPK_251540.1 612 KYLVIPR|RM 0.072 . LdBPK_251540.1 613 YLVIPRR|MK 0.171 . LdBPK_251540.1 615 VIPRRMK|SS 0.166 . LdBPK_251540.1 624 TGNNVPK|KK 0.074 . LdBPK_251540.1 625 GNNVPKK|KY 0.162 . LdBPK_251540.1 626 NNVPKKK|YV 0.246 . LdBPK_251540.1 632 KYVIALR|TQ 0.071 . LdBPK_251540.1 636 ALRTQTK|VS 0.065 . LdBPK_251540.1 648 VVVNIVR|LD 0.065 . LdBPK_251540.1 651 NIVRLDK|NN 0.088 . LdBPK_251540.1 657 KNNAVFK|NV 0.083 . LdBPK_251540.1 677 NTLYQIK|DG 0.070 . LdBPK_251540.1 684 DGNNVFR|TY 0.090 . LdBPK_251540.1 687 NVFRTYR|SD 0.189 . LdBPK_251540.1 692 YRSDNLR|KG 0.108 . LdBPK_251540.1 693 RSDNLRK|GK 0.093 . LdBPK_251540.1 695 DNLRKGK|KQ 0.149 . LdBPK_251540.1 696 NLRKGKK|QH 0.103 . ____________________________^_________________

  • Fasta :-

    >LdBPK_251540.1 ATGGGCAACGGTTGCTGCGGCTGCTGTGACGCGAAGCCGGAGTACAAGCTCGGCAGACCT CTTGTCTCGGGTAAAACCACCCCGTGCTTCAATGATGGCCGCCTCTTCAAGATCGTCAAG GGCGATATCTGGTACTTCTACAACGACACGCAGGACTATCAGATGAAGGTGACAGCCGAC TTCGGCAACGGCTCGAACATCGTCGCGATGAGCGACACAGAACTCGTGCGCAAGAATGAC TCCGGCGCCTGCACCGCGACCGTGTCCGTGTTCCCGCTCGAGACCAAGGCCATGGTGAAA ACCAAGGAGGTGAACGGATTCAACGTAAAGTACTCCGGCATCGCCTTCACCGATGCGTAC CGACAGAAGCTGCGTCAGAAAGCGGCAGCGCAGGTCAGCGCCGACCTCGCCGAGATGCGC AAGCTGCGCGAGAGAAACCCGAAGGTCAACAACCAAAATCGACTCCTGAAGGTGGCACGG ACAATGGGCAAGATGTACGTTGACACGTCCTTTCCGCCCACCTCTCAGTCGCTGATCCGC CCTGGCATCGACCCAGACCCGGATGCGTGCCTGAAGCGGCCGGAGACGATCGCATGGCGT CGCCCCGAAGACTTCCTGCCGAAGAAGTGGCACCCGAAAATTCGTCTCTTCGGCAACATC TCGCCCAAGGACATTAGCCAGGGTCAGCTCGGGGATTGCTACTACCTCTGCGCACTTGCG GCGCTGGCCGAGCACGACGCCGCCATCAAGGGCATCTTTAAGAACCGCCACGGCTGCTGC ATCCGCAGCCAGGAGCGAAAGCATGGTGCGTGGCGCGTGAACCTGAACATAAGCGGGTGG TGGCGCACCATCATCATCGACTCGTATTTGCCCAGCGTGCAGCTGTTGCCGGTGTTCGCG CGCAACCGCAACCACCCGAACGAGCTGTGGGTGTCCTTTGCAGAGAAGGCCTACGCGAAG GTCTTCGGTTCGTACCAGGCGATCGTGGCTGGATACCCGTGGCAAGCCCTCGAGGACCTC ACCGGCTTCCCGGCCTACGACTTTGGCAACATGTGGAGGACAGCGCAGACGGACACCGAT ACACGGAAGAAGCTCTTCGACTCCCTCCACTGGTGGAACGAGAAGAAGTACCTGATCTGC ATTGCCACCCCGTCGAACGGCGCCCTAAAGATGGCTGGTAAGCAGCGCTCAGCAAACCAG TTGGAGGCGCTCTTTGAGAAGGCCGGCCTGAACATCGGCCACGCGTACTCGGTGCTGGAC GTGAAACACTTCCCACTGCACCGGCTGTGCATGCTGAAGATCCGAAACCCGTGGGGGTCG CATGTGGAGTGGACCGGGGACTGGGGAGATGACAGTCCGCTGTGGAACCGCTACCCATTC ATCAAGCTCGCCTGCCGTCCTCAGAAGAAGGCGGATGGCATCTTCTGGATGGAGTGGCGC GATGTGTCTAAGTTCTTCGACAGCGGCTCCGTGTGCTTCCGCCGTGGTCACTGGTTCCGT TCGTGGTATGACTACCGCGTCATCGGCAGCTTTGAGGACCTTGTGTGCGACACCGCGCTG CTGGTCATCGTGAACAAGACGTCGCAGTTTCCGGCGTACATTTCGCTGCACCAGAAGGAC TGCCGCGGGCTGCCGACCAGCGACCCGGACAGCAAGTACGCTTGCGTGATGATCAGCATT TCCGAGGGCGACATCAACGGCTCGCAGCAGAAGGTGGTAGCAAACTCCAGCGAGAACCCG GAGGAGCCGAGCACCGAATACCTCTTCCAGGAGTCTCGCTCTGTCTCCCTCTACTATAAG TTCACAAAGGCCCACAAGTACCTCGTCATTCCGCGTCGCATGAAAAGCAGCACCGGCAAC AACGTCCCAAAGAAGAAGTACGTCATCGCGCTCCGCACGCAGACCAAGGTGTCCAGCGAG GACGTCGTCGTGAACATTGTGCGCCTTGACAAGAACAACGCGGTGTTCAAGAACGTGGCC TCTTTCGACGCTGGCACACCGACGAGCCTCAACACGCTGTACCAGATCAAGGACGGCAAC AACGTCTTTCGCACCTACCGCAGCGACAACTTGCGCAAGGGCAAGAAGCAGCACAACGCG GAGTTCGAGCTGGTGATGTGA
  • Download Fasta

  • Fasta :-

    MGNGCCGCCDAKPEYKLGRPLVSGKTTPCFNDGRLFKIVKGDIWYFYNDTQDYQMKVTAD FGNGSNIVAMSDTELVRKNDSGACTATVSVFPLETKAMVKTKEVNGFNVKYSGIAFTDAY RQKLRQKAAAQVSADLAEMRKLRERNPKVNNQNRLLKVARTMGKMYVDTSFPPTSQSLIR PGIDPDPDACLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALA ALAEHDAAIKGIFKNRHGCCIRSQERKHGAWRVNLNISGWWRTIIIDSYLPSVQLLPVFA RNRNHPNELWVSFAEKAYAKVFGSYQAIVAGYPWQALEDLTGFPAYDFGNMWRTAQTDTD TRKKLFDSLHWWNEKKYLICIATPSNGALKMAGKQRSANQLEALFEKAGLNIGHAYSVLD VKHFPLHRLCMLKIRNPWGSHVEWTGDWGDDSPLWNRYPFIKLACRPQKKADGIFWMEWR DVSKFFDSGSVCFRRGHWFRSWYDYRVIGSFEDLVCDTALLVIVNKTSQFPAYISLHQKD CRGLPTSDPDSKYACVMISISEGDINGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYK FTKAHKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKVSSEDVVVNIVRLDKNNAVFKNVA SFDAGTPTSLNTLYQIKDGNNVFRTYRSDNLRKGKKQHNAEFELVM

  • title: catalytic site
  • coordinates: C233,H414,N436
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_251540.1576 SVVANSSENP0.995unspLdBPK_251540.1576 SVVANSSENP0.995unspLdBPK_251540.1576 SVVANSSENP0.995unspLdBPK_251540.1638 SQTKVSSEDV0.997unspLdBPK_251540.1221 SFGNISPKDI0.994unspLdBPK_251540.1547 SGLPTSDPDS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India