LdBPK_252500.1 | glutathionylspermidine synthase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_252500.1OTHER0.9990630.0002110.000726
No Results

  • Fasta :-

    >LdBPK_252500.1 MLSLPRDHHYHTHHRGTELVPFDQVIGITPDGVPVISNGNEFHFTNLESVTPFYQALCSF DRKAPVTVSYKKLGVKWQCVEFARRYLASRKAVWTASMPIAADMWRAETPFVRVQDGTPV EFTRIANRSHGPAPAMSDIIVWGQSEETPFGHVAVVTEVLPEAVRVAEQNQGFERWPQGM LYSREIPVQRSSAGTVELVDEDPVLGWVTLHCPYYDFRDGDLADKFRIVTGPGCIVRQPF PKHVELPWLQPEERCDFYLKRSLAIGGNVGDDARAKECDVPSAFYFLDYNIWCRLGRAAH SLHRIAMTATAQVLDDADSAYLLEHYFGLPPEIHPLLRRSWEMMPPMSGRFDFGYDGNKV AMLEYNCDSSGALLECCNTQEKMANYYGVSQGMSTGSFLGAKCVSHFARLMSNEKVCPKH KLIHFMIDDDDEERYTAMCMMNFAEKAGFRTKLCVKLIDFRYRDGAPANAAPLSVTCDHP IIVDSDGDEVLLVWKTWSWDTVLREYHRQCSATDSVSSPTLSDILLNNNICVIEPLWKAV TGSKALLPFMHALAPDHEHLLAADFVPTKDIISHHYVSKPINGRAGQNIMMFDPVTDAAE LNAAPQEMLSESSSQLFSIKPPAASCSALQSQSIDRTNECSTGTFFDSAVVYQKRFFLKK FEGKYFPIFCGWMIDDEFGGVVVREDTSKITKLDSIVIPARVVRENVSLGGAYTDEGET
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_252500.1.fa Sequence name : LdBPK_252500 Sequence length : 719 VALUES OF COMPUTED PARAMETERS Coef20 : 3.133 CoefTot : 0.238 ChDiff : -23 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 1.059 0.005 0.551 MesoH : -0.463 0.284 -0.397 0.235 MuHd_075 : 9.007 3.287 2.309 2.249 MuHd_095 : 30.563 10.742 6.178 4.685 MuHd_100 : 21.043 8.337 5.026 2.854 MuHd_105 : 6.733 2.647 3.419 0.142 Hmax_075 : -5.400 -5.500 -3.994 0.000 Hmax_095 : 2.975 -3.400 -3.567 1.490 Hmax_100 : 2.200 -3.400 -3.993 1.490 Hmax_105 : -9.683 -6.650 -5.200 -0.198 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9449 0.0551 DFMC : 0.8841 0.1159
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 719 LdBPK_252500.1 MLSLPRDHHYHTHHRGTELVPFDQVIGITPDGVPVISNGNEFHFTNLESVTPFYQALCSFDRKAPVTVSYKKLGVKWQCV 80 EFARRYLASRKAVWTASMPIAADMWRAETPFVRVQDGTPVEFTRIANRSHGPAPAMSDIIVWGQSEETPFGHVAVVTEVL 160 PEAVRVAEQNQGFERWPQGMLYSREIPVQRSSAGTVELVDEDPVLGWVTLHCPYYDFRDGDLADKFRIVTGPGCIVRQPF 240 PKHVELPWLQPEERCDFYLKRSLAIGGNVGDDARAKECDVPSAFYFLDYNIWCRLGRAAHSLHRIAMTATAQVLDDADSA 320 YLLEHYFGLPPEIHPLLRRSWEMMPPMSGRFDFGYDGNKVAMLEYNCDSSGALLECCNTQEKMANYYGVSQGMSTGSFLG 400 AKCVSHFARLMSNEKVCPKHKLIHFMIDDDDEERYTAMCMMNFAEKAGFRTKLCVKLIDFRYRDGAPANAAPLSVTCDHP 480 IIVDSDGDEVLLVWKTWSWDTVLREYHRQCSATDSVSSPTLSDILLNNNICVIEPLWKAVTGSKALLPFMHALAPDHEHL 560 LAADFVPTKDIISHHYVSKPINGRAGQNIMMFDPVTDAAELNAAPQEMLSESSSQLFSIKPPAASCSALQSQSIDRTNEC 640 STGTFFDSAVVYQKRFFLKKFEGKYFPIFCGWMIDDEFGGVVVREDTSKITKLDSIVIPARVVRENVSLGGAYTDEGET 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >LdBPK_252500.1 ATGCTGTCTCTGCCACGCGACCACCACTACCACACGCACCACCGCGGCACTGAGTTGGTG CCCTTTGACCAGGTTATCGGCATCACCCCAGATGGCGTGCCCGTCATATCCAACGGGAAC GAGTTCCATTTCACCAACCTCGAGTCCGTGACACCGTTCTATCAGGCGCTCTGCTCCTTC GACCGCAAGGCGCCGGTGACTGTGTCGTACAAGAAGCTTGGTGTCAAATGGCAGTGCGTT GAGTTTGCACGCCGCTACCTCGCGTCCCGCAAGGCTGTGTGGACGGCGTCCATGCCGATC GCCGCGGATATGTGGAGAGCGGAGACGCCGTTCGTGCGCGTGCAGGATGGCACACCGGTG GAGTTCACGCGGATCGCCAACAGATCACACGGCCCGGCGCCGGCGATGTCAGACATCATT GTGTGGGGTCAGAGCGAGGAGACGCCGTTTGGCCACGTCGCGGTTGTGACGGAGGTGCTG CCGGAGGCGGTGCGAGTGGCGGAGCAGAACCAGGGCTTTGAGCGGTGGCCGCAGGGCATG CTGTACAGCCGGGAGATTCCAGTGCAGCGCAGCAGCGCAGGCACAGTAGAGCTCGTAGAC GAGGACCCGGTGCTGGGGTGGGTGACGCTGCACTGCCCCTACTACGACTTTCGCGATGGC GACCTGGCCGACAAGTTCCGCATTGTCACCGGACCGGGCTGCATCGTGCGCCAACCCTTC CCCAAACACGTGGAGTTACCGTGGCTTCAACCAGAGGAGCGGTGCGACTTTTATCTGAAG CGTTCCCTTGCGATTGGCGGCAACGTCGGCGACGACGCGAGGGCGAAGGAGTGTGACGTG CCCAGCGCTTTTTACTTTCTCGACTACAACATCTGGTGCCGGCTCGGGCGAGCGGCTCAC TCGCTGCACCGCATTGCCATGACTGCCACAGCCCAGGTCCTCGATGACGCAGACTCGGCG TATCTCTTGGAGCACTACTTTGGGCTACCCCCAGAGATTCATCCGCTGCTGCGTCGCTCG TGGGAGATGATGCCGCCAATGAGTGGCCGCTTTGACTTCGGCTATGACGGCAACAAGGTG GCAATGCTGGAGTACAACTGCGACTCCTCTGGCGCGCTGCTAGAGTGCTGCAACACCCAA GAGAAGATGGCCAACTACTACGGCGTGTCGCAGGGGATGTCGACCGGCTCCTTCTTGGGG GCCAAGTGCGTGTCACACTTTGCGCGCTTGATGTCGAACGAGAAGGTGTGCCCCAAGCAC AAGCTGATTCACTTCATGATCGACGACGACGACGAGGAGCGCTACACCGCCATGTGCATG ATGAACTTTGCAGAGAAAGCCGGCTTCCGCACGAAGCTTTGCGTGAAGCTGATCGACTTC CGTTACCGCGACGGCGCTCCTGCCAACGCCGCTCCGCTCTCCGTGACATGCGACCACCCC ATCATAGTTGACAGTGACGGCGACGAGGTTCTTCTGGTGTGGAAGACGTGGTCGTGGGAC ACGGTGTTGAGAGAATACCACCGCCAGTGCAGTGCAACAGACTCGGTCAGCAGTCCGACG CTCTCTGACATTCTCCTCAACAACAACATTTGCGTCATCGAGCCGCTCTGGAAAGCTGTA ACGGGGAGCAAGGCGCTTCTTCCCTTTATGCACGCTCTGGCTCCTGACCACGAGCACCTC CTCGCGGCGGACTTTGTACCCACAAAAGACATCATCTCCCACCACTACGTCTCCAAGCCC ATCAACGGTCGAGCTGGGCAGAACATCATGATGTTTGACCCCGTGACTGACGCGGCGGAG CTGAACGCGGCTCCTCAAGAGATGCTCAGTGAGAGCTCGTCGCAGCTCTTCTCCATCAAG CCGCCTGCCGCCTCCTGCTCTGCGCTACAGAGCCAGTCGATAGACCGCACCAATGAGTGC TCGACTGGCACGTTTTTCGACTCCGCCGTCGTCTATCAGAAGCGTTTTTTCTTGAAGAAA TTTGAAGGCAAGTACTTCCCCATTTTCTGTGGATGGATGATCGACGACGAATTTGGTGGT GTCGTAGTCCGCGAAGACACATCAAAGATCACGAAGCTGGATAGCATCGTCATCCCCGCG CGCGTTGTGCGCGAGAACGTCTCGCTCGGTGGGGCGTACACTGACGAGGGTGAGACGTAG
  • Download Fasta

  • Fasta :-

    MLSLPRDHHYHTHHRGTELVPFDQVIGITPDGVPVISNGNEFHFTNLESVTPFYQALCSF DRKAPVTVSYKKLGVKWQCVEFARRYLASRKAVWTASMPIAADMWRAETPFVRVQDGTPV EFTRIANRSHGPAPAMSDIIVWGQSEETPFGHVAVVTEVLPEAVRVAEQNQGFERWPQGM LYSREIPVQRSSAGTVELVDEDPVLGWVTLHCPYYDFRDGDLADKFRIVTGPGCIVRQPF PKHVELPWLQPEERCDFYLKRSLAIGGNVGDDARAKECDVPSAFYFLDYNIWCRLGRAAH SLHRIAMTATAQVLDDADSAYLLEHYFGLPPEIHPLLRRSWEMMPPMSGRFDFGYDGNKV AMLEYNCDSSGALLECCNTQEKMANYYGVSQGMSTGSFLGAKCVSHFARLMSNEKVCPKH KLIHFMIDDDDEERYTAMCMMNFAEKAGFRTKLCVKLIDFRYRDGAPANAAPLSVTCDHP IIVDSDGDEVLLVWKTWSWDTVLREYHRQCSATDSVSSPTLSDILLNNNICVIEPLWKAV TGSKALLPFMHALAPDHEHLLAADFVPTKDIISHHYVSKPINGRAGQNIMMFDPVTDAAE LNAAPQEMLSESSSQLFSIKPPAASCSALQSQSIDRTNECSTGTFFDSAVVYQKRFFLKK FEGKYFPIFCGWMIDDEFGGVVVREDTSKITKLDSIVIPARVVRENVSLGGAYTDEGET

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_252500.1518 SDSVSSPTLS0.994unspLdBPK_252500.1518 SDSVSSPTLS0.994unspLdBPK_252500.1518 SDSVSSPTLS0.994unspLdBPK_252500.1687 TVREDTSKIT0.995unspLdBPK_252500.1340 SLLRRSWEMM0.996unspLdBPK_252500.1511 SHRQCSATDS0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India