LdBPK_252540.1 | Xaa-Pro aminopeptidase, putative (fragment)

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_252540.1OTHER0.9858620.0010720.013066
No Results

  • Fasta :-

    >LdBPK_252540.1 MNPYVATVAEWERLSKRINLRPVANIVQDMMPPEKNVQRMYVRPVEFCGATCQERRAAIL AELEKKDCDLIILSALDEIAWLTNLRGGDV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_252540.1.fa Sequence name : LdBPK_252540 Sequence length : 90 VALUES OF COMPUTED PARAMETERS Coef20 : 4.202 CoefTot : -0.262 ChDiff : -1 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.071 1.159 -0.139 0.482 MesoH : -1.800 -0.024 -0.616 0.009 MuHd_075 : 28.997 20.171 8.971 6.430 MuHd_095 : 30.982 6.099 6.371 5.926 MuHd_100 : 38.971 16.031 8.672 8.124 MuHd_105 : 40.089 21.760 9.072 8.950 Hmax_075 : 3.267 11.083 -0.287 4.363 Hmax_095 : 8.700 3.400 -0.222 3.460 Hmax_100 : 12.100 8.800 0.852 4.440 Hmax_105 : 14.300 11.500 1.107 5.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7532 0.2468 DFMC : 0.8494 0.1506
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 90 LdBPK_252540.1 MNPYVATVAEWERLSKRINLRPVANIVQDMMPPEKNVQRMYVRPVEFCGATCQERRAAILAELEKKDCDLIILSALDEIA 80 WLTNLRGGDV 160 ................................................................................ 80 .......... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_252540.1 13 TVAEWER|LS 0.075 . LdBPK_252540.1 16 EWERLSK|RI 0.087 . LdBPK_252540.1 17 WERLSKR|IN 0.130 . LdBPK_252540.1 21 SKRINLR|PV 0.148 . LdBPK_252540.1 35 DMMPPEK|NV 0.067 . LdBPK_252540.1 39 PEKNVQR|MY 0.081 . LdBPK_252540.1 43 VQRMYVR|PV 0.135 . LdBPK_252540.1 55 GATCQER|RA 0.076 . LdBPK_252540.1 56 ATCQERR|AA 0.156 . LdBPK_252540.1 65 ILAELEK|KD 0.059 . LdBPK_252540.1 66 LAELEKK|DC 0.120 . LdBPK_252540.1 86 AWLTNLR|GG 0.079 . ____________________________^_________________

  • Fasta :-

    >LdBPK_252540.1 ATGAACCCGTACGTCGCCACGGTGGCGGAGTGGGAACGGCTGAGCAAGCGGATCAATCTG CGTCCTGTGGCAAACATCGTTCAGGACATGATGCCGCCGGAGAAGAACGTGCAAAGAATG TACGTGCGTCCCGTTGAGTTCTGCGGTGCCACCTGCCAGGAGCGGCGCGCCGCGATTCTC GCAGAGCTGGAGAAGAAGGACTGCGACCTGATCATTCTCTCCGCACTGGATGAGATCGCG TGGCTCACGAATCTGCGCGGCGGCGACGTG
  • Download Fasta

  • Fasta :-

    MNPYVATVAEWERLSKRINLRPVANIVQDMMPPEKNVQRMYVRPVEFCGATCQERRAAIL AELEKKDCDLIILSALDEIAWLTNLRGGDV

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India