LdBPK_261550.1 | thimet oligopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_261550.1OTHER0.9906030.0013820.008015
No Results

  • Fasta :-

    >LdBPK_261550.1 MAATSIFANISTVEKCAALFPKTVAACEDLVKAAKHRAEQSLGKIYGIRAADRTFQNTAK SIDMASIELEVSASLLSVIASVSPSKEVRDEATKRVVELETFSIDNFESNRQLYSALKEV CAAPAYEAVYVSGKAPREYMYWMEEQLADYRRKGMELPEEEFQKVVQLQKELASLCTVFQ QNISEDKTEVHFTVDALKGVPESVLSGLQRTEAGECTLKMDYPTYFAVMKNCEVASTRQA MAQAFTNRAYPVNDKVLKDIIEKRHQLAVLLGYPSFAHLYISDKMAKTPEMAQAFVESLI PKLQKKWVAEVELLKKHLHPSCSLSPAGEIEAYDIPFMINQIKKTLLNVSETAIQEYFPM DATVKALFDIYQSFFDVTFLQVDNGSELWHSEAKTLEVKDNKSGCVLGYIILDLFPREGK YSHACCHSVVPPVLLKEGGNDFSPALAVVIANFPAATADRPALFLHDDVETFFHEFGHAI HSLMGRTRMATFAGTRVKRDFVELPSQMLEEWLWEPEILQKITSHYKTKEQLPRALIDAK VASKNAFSGRDTLRQLQFATYSLQIFGLPFSTQPRDNLNTTQLFYDLEPRVMPGVNYEHN THFESAFGHLTGYGAGYYGYMWSKVFALDLFEYIRSHNGLLDPKMGRRYVDCIIGVGGSQ DPNDMLVKFLGREPNNEAFLRNIGV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_261550.1.fa Sequence name : LdBPK_261550 Sequence length : 685 VALUES OF COMPUTED PARAMETERS Coef20 : 4.747 CoefTot : 0.487 ChDiff : -14 ZoneTo : 27 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.453 1.524 0.141 0.591 MesoH : -0.391 0.465 -0.298 0.277 MuHd_075 : 24.041 15.226 7.506 4.474 MuHd_095 : 26.119 16.179 9.464 5.191 MuHd_100 : 28.269 20.818 10.815 6.257 MuHd_105 : 26.795 21.691 10.254 7.121 Hmax_075 : 15.050 13.500 3.536 4.730 Hmax_095 : 15.700 17.700 5.665 6.160 Hmax_100 : 17.600 22.500 6.719 6.000 Hmax_105 : 16.450 24.033 5.915 8.073 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9067 0.0933 DFMC : 0.8312 0.1688
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 685 LdBPK_261550.1 MAATSIFANISTVEKCAALFPKTVAACEDLVKAAKHRAEQSLGKIYGIRAADRTFQNTAKSIDMASIELEVSASLLSVIA 80 SVSPSKEVRDEATKRVVELETFSIDNFESNRQLYSALKEVCAAPAYEAVYVSGKAPREYMYWMEEQLADYRRKGMELPEE 160 EFQKVVQLQKELASLCTVFQQNISEDKTEVHFTVDALKGVPESVLSGLQRTEAGECTLKMDYPTYFAVMKNCEVASTRQA 240 MAQAFTNRAYPVNDKVLKDIIEKRHQLAVLLGYPSFAHLYISDKMAKTPEMAQAFVESLIPKLQKKWVAEVELLKKHLHP 320 SCSLSPAGEIEAYDIPFMINQIKKTLLNVSETAIQEYFPMDATVKALFDIYQSFFDVTFLQVDNGSELWHSEAKTLEVKD 400 NKSGCVLGYIILDLFPREGKYSHACCHSVVPPVLLKEGGNDFSPALAVVIANFPAATADRPALFLHDDVETFFHEFGHAI 480 HSLMGRTRMATFAGTRVKRDFVELPSQMLEEWLWEPEILQKITSHYKTKEQLPRALIDAKVASKNAFSGRDTLRQLQFAT 560 YSLQIFGLPFSTQPRDNLNTTQLFYDLEPRVMPGVNYEHNTHFESAFGHLTGYGAGYYGYMWSKVFALDLFEYIRSHNGL 640 LDPKMGRRYVDCIIGVGGSQDPNDMLVKFLGREPNNEAFLRNIGV 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................P............................................................. 560 ................................................................................ 640 ............................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_261550.1 15 NISTVEK|CA 0.070 . LdBPK_261550.1 22 CAALFPK|TV 0.107 . LdBPK_261550.1 32 ACEDLVK|AA 0.063 . LdBPK_261550.1 35 DLVKAAK|HR 0.061 . LdBPK_261550.1 37 VKAAKHR|AE 0.099 . LdBPK_261550.1 44 AEQSLGK|IY 0.065 . LdBPK_261550.1 49 GKIYGIR|AA 0.114 . LdBPK_261550.1 53 GIRAADR|TF 0.085 . LdBPK_261550.1 60 TFQNTAK|SI 0.102 . LdBPK_261550.1 86 ASVSPSK|EV 0.072 . LdBPK_261550.1 89 SPSKEVR|DE 0.177 . LdBPK_261550.1 94 VRDEATK|RV 0.065 . LdBPK_261550.1 95 RDEATKR|VV 0.286 . LdBPK_261550.1 111 DNFESNR|QL 0.094 . LdBPK_261550.1 118 QLYSALK|EV 0.074 . LdBPK_261550.1 134 AVYVSGK|AP 0.065 . LdBPK_261550.1 137 VSGKAPR|EY 0.099 . LdBPK_261550.1 151 EQLADYR|RK 0.083 . LdBPK_261550.1 152 QLADYRR|KG 0.119 . LdBPK_261550.1 153 LADYRRK|GM 0.094 . LdBPK_261550.1 164 PEEEFQK|VV 0.068 . LdBPK_261550.1 170 KVVQLQK|EL 0.056 . LdBPK_261550.1 187 QNISEDK|TE 0.055 . LdBPK_261550.1 198 FTVDALK|GV 0.070 . LdBPK_261550.1 210 VLSGLQR|TE 0.086 . LdBPK_261550.1 219 AGECTLK|MD 0.057 . LdBPK_261550.1 230 TYFAVMK|NC 0.067 . LdBPK_261550.1 238 CEVASTR|QA 0.127 . LdBPK_261550.1 248 AQAFTNR|AY 0.091 . LdBPK_261550.1 255 AYPVNDK|VL 0.057 . LdBPK_261550.1 258 VNDKVLK|DI 0.093 . LdBPK_261550.1 263 LKDIIEK|RH 0.054 . LdBPK_261550.1 264 KDIIEKR|HQ 0.188 . LdBPK_261550.1 284 HLYISDK|MA 0.075 . LdBPK_261550.1 287 ISDKMAK|TP 0.068 . LdBPK_261550.1 302 VESLIPK|LQ 0.064 . LdBPK_261550.1 305 LIPKLQK|KW 0.062 . LdBPK_261550.1 306 IPKLQKK|WV 0.210 . LdBPK_261550.1 315 AEVELLK|KH 0.050 . LdBPK_261550.1 316 EVELLKK|HL 0.085 . LdBPK_261550.1 343 FMINQIK|KT 0.059 . LdBPK_261550.1 344 MINQIKK|TL 0.106 . LdBPK_261550.1 365 PMDATVK|AL 0.069 . LdBPK_261550.1 394 LWHSEAK|TL 0.076 . LdBPK_261550.1 399 AKTLEVK|DN 0.061 . LdBPK_261550.1 402 LEVKDNK|SG 0.070 . LdBPK_261550.1 417 ILDLFPR|EG 0.073 . LdBPK_261550.1 420 LFPREGK|YS 0.142 . LdBPK_261550.1 436 VPPVLLK|EG 0.058 . LdBPK_261550.1 460 PAATADR|PA 0.085 . LdBPK_261550.1 486 IHSLMGR|TR 0.104 . LdBPK_261550.1 488 SLMGRTR|MA 0.134 . LdBPK_261550.1 496 ATFAGTR|VK 0.069 . LdBPK_261550.1 498 FAGTRVK|RD 0.067 . LdBPK_261550.1 499 AGTRVKR|DF 0.578 *ProP* LdBPK_261550.1 521 EPEILQK|IT 0.069 . LdBPK_261550.1 527 KITSHYK|TK 0.064 . LdBPK_261550.1 529 TSHYKTK|EQ 0.066 . LdBPK_261550.1 534 TKEQLPR|AL 0.130 . LdBPK_261550.1 540 RALIDAK|VA 0.073 . LdBPK_261550.1 544 DAKVASK|NA 0.074 . LdBPK_261550.1 550 KNAFSGR|DT 0.191 . LdBPK_261550.1 554 SGRDTLR|QL 0.099 . LdBPK_261550.1 575 PFSTQPR|DN 0.105 . LdBPK_261550.1 590 FYDLEPR|VM 0.066 . LdBPK_261550.1 624 YGYMWSK|VF 0.057 . LdBPK_261550.1 635 DLFEYIR|SH 0.098 . LdBPK_261550.1 644 NGLLDPK|MG 0.057 . LdBPK_261550.1 647 LDPKMGR|RY 0.079 . LdBPK_261550.1 648 DPKMGRR|YV 0.289 . LdBPK_261550.1 668 PNDMLVK|FL 0.077 . LdBPK_261550.1 672 LVKFLGR|EP 0.069 . LdBPK_261550.1 681 NNEAFLR|NI 0.128 . ____________________________^_________________

  • Fasta :-

    >LdBPK_261550.1 ATGGCCGCTACTTCGATCTTTGCGAATATTTCCACGGTCGAAAAATGTGCCGCACTATTT CCCAAGACGGTTGCTGCATGCGAGGACCTGGTCAAGGCAGCGAAGCATCGCGCAGAGCAG TCGCTGGGCAAGATCTACGGCATCCGTGCTGCCGACCGCACCTTTCAAAACACTGCCAAG TCCATTGATATGGCGTCGATTGAGCTGGAGGTGTCGGCCAGTCTGCTCTCCGTCATCGCA AGCGTGTCTCCGAGCAAGGAGGTGCGTGACGAAGCAACCAAGCGCGTTGTGGAGCTCGAG ACCTTTTCTATTGACAATTTCGAATCGAACCGCCAGCTGTACTCTGCGCTGAAGGAAGTG TGTGCCGCGCCGGCGTATGAGGCGGTGTATGTGAGCGGGAAGGCGCCGCGTGAGTACATG TACTGGATGGAGGAGCAGCTTGCTGATTACCGCCGCAAGGGTATGGAGCTGCCAGAGGAA GAGTTCCAGAAGGTCGTCCAGCTGCAAAAGGAGCTCGCATCGCTGTGCACGGTGTTTCAG CAGAACATCAGCGAAGACAAGACGGAGGTGCATTTCACGGTGGATGCGCTGAAGGGCGTG CCAGAGAGCGTGCTCTCGGGACTGCAGCGCACGGAGGCCGGCGAGTGCACGCTGAAGATG GACTACCCGACCTACTTCGCCGTGATGAAGAACTGCGAGGTGGCGTCAACGCGTCAGGCG ATGGCGCAAGCCTTCACGAATCGCGCGTACCCCGTGAACGACAAAGTGCTGAAGGACATT ATCGAAAAGCGTCACCAGCTGGCAGTCCTCCTTGGCTACCCCTCCTTCGCGCATCTGTAC ATCTCAGACAAGATGGCGAAGACGCCGGAGATGGCGCAGGCTTTTGTAGAAAGCCTGATT CCAAAGCTGCAGAAGAAGTGGGTGGCTGAGGTGGAGCTGCTAAAGAAGCACCTGCACCCC AGCTGCTCGCTGTCGCCTGCAGGGGAAATAGAGGCGTACGATATCCCTTTCATGATCAAC CAGATCAAGAAGACACTGCTGAATGTGAGCGAGACAGCGATCCAGGAGTACTTCCCCATG GACGCGACAGTGAAAGCGCTCTTCGACATCTACCAGTCCTTCTTTGACGTGACGTTCCTG CAGGTAGACAACGGTTCAGAGCTGTGGCACAGCGAAGCAAAGACACTGGAGGTCAAGGAC AACAAGAGCGGCTGCGTGCTGGGCTATATCATCCTTGATCTATTCCCTCGTGAAGGCAAG TACTCACATGCGTGCTGCCACTCTGTGGTGCCACCCGTGCTTCTCAAGGAAGGTGGAAAC GACTTCTCCCCGGCACTGGCCGTTGTCATTGCGAATTTCCCAGCAGCCACGGCCGACCGG CCGGCGCTGTTCCTGCACGACGATGTCGAAACATTCTTTCACGAGTTTGGCCACGCTATT CACTCTCTGATGGGGAGGACGCGTATGGCGACCTTTGCAGGCACGCGTGTGAAGCGTGAC TTCGTGGAGCTGCCGTCCCAGATGCTTGAGGAGTGGCTGTGGGAACCGGAGATTCTGCAG AAGATCACGAGTCATTACAAGACGAAGGAGCAGCTGCCACGTGCGTTGATCGACGCCAAG GTGGCATCGAAGAACGCGTTCAGTGGACGCGACACGCTGCGCCAGCTGCAGTTTGCGACA TATTCGCTTCAGATTTTCGGACTGCCATTCTCGACGCAGCCGCGTGACAACCTCAACACT ACGCAGCTCTTCTACGATTTGGAGCCGCGCGTGATGCCCGGTGTGAACTACGAGCATAAT ACGCACTTTGAGAGCGCGTTCGGGCACTTGACGGGCTACGGTGCCGGCTACTACGGGTAC ATGTGGTCCAAGGTGTTTGCCTTGGACCTGTTCGAGTACATCCGCTCGCACAACGGTCTC CTCGACCCCAAGATGGGCCGCCGCTACGTGGACTGCATCATCGGTGTCGGTGGCAGCCAG GACCCGAACGACATGCTGGTCAAGTTCCTCGGGCGCGAGCCGAACAATGAGGCATTCCTG CGCAACATTGGTGTGTAG
  • Download Fasta

  • Fasta :-

    MAATSIFANISTVEKCAALFPKTVAACEDLVKAAKHRAEQSLGKIYGIRAADRTFQNTAK SIDMASIELEVSASLLSVIASVSPSKEVRDEATKRVVELETFSIDNFESNRQLYSALKEV CAAPAYEAVYVSGKAPREYMYWMEEQLADYRRKGMELPEEEFQKVVQLQKELASLCTVFQ QNISEDKTEVHFTVDALKGVPESVLSGLQRTEAGECTLKMDYPTYFAVMKNCEVASTRQA MAQAFTNRAYPVNDKVLKDIIEKRHQLAVLLGYPSFAHLYISDKMAKTPEMAQAFVESLI PKLQKKWVAEVELLKKHLHPSCSLSPAGEIEAYDIPFMINQIKKTLLNVSETAIQEYFPM DATVKALFDIYQSFFDVTFLQVDNGSELWHSEAKTLEVKDNKSGCVLGYIILDLFPREGK YSHACCHSVVPPVLLKEGGNDFSPALAVVIANFPAATADRPALFLHDDVETFFHEFGHAI HSLMGRTRMATFAGTRVKRDFVELPSQMLEEWLWEPEILQKITSHYKTKEQLPRALIDAK VASKNAFSGRDTLRQLQFATYSLQIFGLPFSTQPRDNLNTTQLFYDLEPRVMPGVNYEHN THFESAFGHLTGYGAGYYGYMWSKVFALDLFEYIRSHNGLLDPKMGRRYVDCIIGVGGSQ DPNDMLVKFLGREPNNEAFLRNIGV

  • title: Zn binding site
  • coordinates: H474,H478,E503
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_261550.1548 SKNAFSGRDT0.997unspLdBPK_261550.1552 TSGRDTLRQL0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India