LdBPK_262440.1 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_262440.1OTHER0.9995050.0004270.000069
No Results

  • Fasta :-

    >LdBPK_262440.1 MESVEAVELFSERSARYRYRVPVSVIRELQYEGSRYSAEFNVGGWFWRFHIQERSAEGQR FLALHLQSCTPGAVSVHFKLTAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLH PESGFVYTVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSATRSVTPTRSVVGAGVAGTNG GQISPSRGPSVRPVGGRGGVTPLGRSGGTSYSPGRVGTSALVPMEGSVDRPGASAGAALR RGFYSDPSGGQMMTLDNASTVGGDGGGRVAGSAVVRAPLAYPFAHLEILCDMSFDVQGVR VKAHRCVIGARMQPLLPEQMLPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPES LLDLYLLAAACEFYDLSAVCIRYVRPLLTPENILPIVLTRYNAADEVLTSLYLHVLLDNY DILIQDRQFEEIPGHLFRRLSLILYSKETVPNAPIPPMKNTLGKQLAWLAESGEYSDYEW VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPSFTTNEFDFSLRSWQKLLMGMYRR HLDTARDFSAEDIAIIFKMQQVLIMDGQLKREADEAFSNTNALRLLIYAVKHQIPELHER AISYVARNFSAMIRNDSQAWELISELPQTAVVSLFRTVTEQPTL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_262440.1.fa Sequence name : LdBPK_262440 Sequence length : 644 VALUES OF COMPUTED PARAMETERS Coef20 : 4.445 CoefTot : 0.000 ChDiff : -1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.541 2.024 0.346 0.696 MesoH : -0.059 0.844 -0.125 0.370 MuHd_075 : 33.214 16.132 7.385 5.870 MuHd_095 : 27.086 10.824 7.297 3.179 MuHd_100 : 31.500 12.783 8.370 3.862 MuHd_105 : 34.594 14.520 9.024 4.590 Hmax_075 : 4.550 9.683 -0.610 3.617 Hmax_095 : -0.875 3.300 -1.246 0.980 Hmax_100 : -1.600 4.300 -1.237 0.360 Hmax_105 : 10.967 9.683 1.452 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8562 0.1438 DFMC : 0.8756 0.1244
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 644 LdBPK_262440.1 MESVEAVELFSERSARYRYRVPVSVIRELQYEGSRYSAEFNVGGWFWRFHIQERSAEGQRFLALHLQSCTPGAVSVHFKL 80 TAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLHPESGFVYTVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSA 160 TRSVTPTRSVVGAGVAGTNGGQISPSRGPSVRPVGGRGGVTPLGRSGGTSYSPGRVGTSALVPMEGSVDRPGASAGAALR 240 RGFYSDPSGGQMMTLDNASTVGGDGGGRVAGSAVVRAPLAYPFAHLEILCDMSFDVQGVRVKAHRCVIGARMQPLLPEQM 320 LPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPESLLDLYLLAAACEFYDLSAVCIRYVRPLLTPENILPIVLTR 400 YNAADEVLTSLYLHVLLDNYDILIQDRQFEEIPGHLFRRLSLILYSKETVPNAPIPPMKNTLGKQLAWLAESGEYSDYEW 480 VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPSFTTNEFDFSLRSWQKLLMGMYRRHLDTARDFSAEDIAIIFKMQ 560 QVLIMDGQLKREADEAFSNTNALRLLIYAVKHQIPELHERAISYVARNFSAMIRNDSQAWELISELPQTAVVSLFRTVTE 640 QPTL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_262440.1 13 VELFSER|SA 0.111 . LdBPK_262440.1 16 FSERSAR|YR 0.349 . LdBPK_262440.1 18 ERSARYR|YR 0.115 . LdBPK_262440.1 20 SARYRYR|VP 0.097 . LdBPK_262440.1 27 VPVSVIR|EL 0.088 . LdBPK_262440.1 35 LQYEGSR|YS 0.075 . LdBPK_262440.1 48 VGGWFWR|FH 0.128 . LdBPK_262440.1 54 RFHIQER|SA 0.305 . LdBPK_262440.1 60 RSAEGQR|FL 0.091 . LdBPK_262440.1 79 AVSVHFK|LT 0.086 . LdBPK_262440.1 86 LTAVCMR|DP 0.112 . LdBPK_262440.1 92 RDPLQSR|SK 0.093 . LdBPK_262440.1 94 PLQSRSK|TF 0.059 . LdBPK_262440.1 101 TFNCTFK|KA 0.089 . LdBPK_262440.1 102 FNCTFKK|AG 0.117 . LdBPK_262440.1 135 VQETGTR|CV 0.087 . LdBPK_262440.1 153 NGSGNGR|AP 0.080 . LdBPK_262440.1 158 GRAPPVR|SA 0.256 . LdBPK_262440.1 162 PVRSATR|SV 0.190 . LdBPK_262440.1 168 RSVTPTR|SV 0.244 . LdBPK_262440.1 187 GQISPSR|GP 0.096 . LdBPK_262440.1 192 SRGPSVR|PV 0.247 . LdBPK_262440.1 197 VRPVGGR|GG 0.088 . LdBPK_262440.1 205 GVTPLGR|SG 0.130 . LdBPK_262440.1 215 TSYSPGR|VG 0.088 . LdBPK_262440.1 230 MEGSVDR|PG 0.089 . LdBPK_262440.1 240 SAGAALR|RG 0.077 . LdBPK_262440.1 241 AGAALRR|GF 0.135 . LdBPK_262440.1 268 GGDGGGR|VA 0.087 . LdBPK_262440.1 276 AGSAVVR|AP 0.100 . LdBPK_262440.1 300 FDVQGVR|VK 0.060 . LdBPK_262440.1 302 VQGVRVK|AH 0.066 . LdBPK_262440.1 305 VRVKAHR|CV 0.186 . LdBPK_262440.1 311 RCVIGAR|MQ 0.081 . LdBPK_262440.1 343 VFTTFLR|YV 0.114 . LdBPK_262440.1 382 LSAVCIR|YV 0.175 . LdBPK_262440.1 385 VCIRYVR|PL 0.159 . LdBPK_262440.1 400 LPIVLTR|YN 0.107 . LdBPK_262440.1 427 DILIQDR|QF 0.095 . LdBPK_262440.1 438 IPGHLFR|RL 0.124 . LdBPK_262440.1 439 PGHLFRR|LS 0.108 . LdBPK_262440.1 447 SLILYSK|ET 0.058 . LdBPK_262440.1 459 APIPPMK|NT 0.074 . LdBPK_262440.1 464 MKNTLGK|QL 0.079 . LdBPK_262440.1 493 YAVHAHR|YI 0.112 . LdBPK_262440.1 499 RYILACR|CV 0.104 . LdBPK_262440.1 510 SQAMNPR|SP 0.180 . LdBPK_262440.1 528 EFDFSLR|SW 0.133 . LdBPK_262440.1 532 SLRSWQK|LL 0.067 . LdBPK_262440.1 539 LLMGMYR|RH 0.080 . LdBPK_262440.1 540 LMGMYRR|HL 0.239 . LdBPK_262440.1 546 RHLDTAR|DF 0.129 . LdBPK_262440.1 558 DIAIIFK|MQ 0.061 . LdBPK_262440.1 570 IMDGQLK|RE 0.056 . LdBPK_262440.1 571 MDGQLKR|EA 0.281 . LdBPK_262440.1 584 SNTNALR|LL 0.093 . LdBPK_262440.1 591 LLIYAVK|HQ 0.068 . LdBPK_262440.1 600 IPELHER|AI 0.140 . LdBPK_262440.1 607 AISYVAR|NF 0.166 . LdBPK_262440.1 614 NFSAMIR|ND 0.104 . LdBPK_262440.1 636 AVVSLFR|TV 0.104 . ____________________________^_________________

  • Fasta :-

    >LdBPK_262440.1 ATGGAATCGGTGGAGGCCGTGGAGCTCTTCTCGGAGCGCAGCGCACGCTATCGCTACCGC GTGCCGGTGAGCGTGATTCGCGAGCTGCAGTACGAGGGATCACGCTACAGCGCTGAGTTC AACGTTGGCGGCTGGTTCTGGCGCTTCCACATTCAAGAGCGATCCGCCGAGGGCCAGCGC TTCCTGGCGCTGCACCTTCAGAGCTGCACGCCGGGTGCTGTCTCTGTCCACTTTAAGCTC ACGGCCGTCTGCATGCGTGACCCGCTGCAGTCGCGCAGCAAGACGTTCAACTGCACCTTC AAGAAGGCCGGAAGTGCTTGGGGACTTCACCAGTTCATCGCGATCGAGCAACTGCTGCAC CCTGAGAGCGGGTTCGTGTACACGGTGCAGGAGACGGGGACCCGCTGCGTTGATTTCGAG GCGGTGCTGCAGGTGGACAACGGCAGCGGCAACGGGCGTGCTCCACCTGTGCGCAGCGCA ACCCGCTCCGTCACCCCGACCCGCAGCGTCGTTGGCGCCGGCGTTGCAGGAACGAACGGC GGACAGATATCGCCAAGCCGAGGCCCTAGCGTGCGGCCGGTCGGCGGACGTGGCGGCGTC ACTCCACTGGGACGGAGCGGTGGGACGTCGTACTCGCCTGGCCGAGTCGGCACCAGCGCA CTCGTTCCGATGGAGGGCAGCGTGGACCGGCCTGGCGCGAGTGCCGGGGCCGCGCTGCGT CGCGGCTTCTACAGCGACCCGAGCGGTGGTCAGATGATGACCTTAGACAACGCCTCGACC GTCGGCGGCGATGGCGGTGGCCGAGTAGCTGGGAGCGCCGTCGTGCGCGCACCGCTCGCG TACCCCTTTGCGCACTTGGAGATCCTGTGCGACATGAGCTTCGACGTCCAGGGCGTCCGC GTCAAGGCCCACCGCTGCGTGATTGGCGCGCGCATGCAGCCGCTGCTTCCCGAGCAGATG CTGCCGTTGCAGGTCGGCTGCATCGTCGCCATCGCCGTCCCCCTCGACGTCTTCACAACC TTTCTGCGGTACGTGTACACGGAAGAGTATCCTGAGTCGGGCGTCTTACCGCCAGAGTCG CTGCTTGACTTGTACCTGCTTGCGGCAGCGTGCGAGTTCTACGACCTCAGCGCGGTCTGC ATCCGCTACGTTCGCCCGCTCCTGACGCCTGAGAACATTCTACCCATTGTGCTGACGCGC TACAACGCTGCGGACGAGGTGCTCACCTCTCTCTACCTGCACGTGCTGCTGGACAACTAC GATATCCTCATCCAGGACCGCCAGTTTGAAGAGATTCCTGGCCACCTCTTCCGTCGTCTT TCGCTAATTCTTTACAGCAAGGAGACGGTGCCGAATGCGCCGATCCCACCCATGAAAAAC ACACTGGGGAAGCAGCTTGCGTGGCTGGCGGAGTCGGGGGAGTACAGCGACTACGAGTGG GTGGTGGGGCCGCAGCAGTACGCGGTGCACGCCCACCGCTACATTCTCGCCTGCCGCTGT GTGCTGTTCTCGCAAGCGATGAACCCACGGAGCCCGGGACCGCTTCCGTCGTTCACCACC AACGAGTTCGACTTTTCCTTGCGTAGCTGGCAGAAGTTGTTGATGGGGATGTACCGTCGC CACCTTGACACCGCGCGCGACTTCTCGGCCGAGGACATTGCCATCATCTTCAAGATGCAG CAGGTGCTCATCATGGACGGCCAACTGAAGCGCGAGGCGGATGAGGCGTTTAGCAACACA AACGCCCTGCGCCTCCTCATCTATGCCGTGAAGCATCAAATACCGGAGTTGCACGAGCGT GCCATCAGCTACGTGGCGCGTAACTTCAGCGCGATGATCCGCAACGACTCACAGGCGTGG GAGCTGATTAGCGAGCTGCCGCAGACAGCTGTGGTGTCGCTGTTCCGCACGGTGACGGAG CAACCAACGTTGTAG
  • Download Fasta

  • Fasta :-

    MESVEAVELFSERSARYRYRVPVSVIRELQYEGSRYSAEFNVGGWFWRFHIQERSAEGQR FLALHLQSCTPGAVSVHFKLTAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLH PESGFVYTVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSATRSVTPTRSVVGAGVAGTNG GQISPSRGPSVRPVGGRGGVTPLGRSGGTSYSPGRVGTSALVPMEGSVDRPGASAGAALR RGFYSDPSGGQMMTLDNASTVGGDGGGRVAGSAVVRAPLAYPFAHLEILCDMSFDVQGVR VKAHRCVIGARMQPLLPEQMLPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPES LLDLYLLAAACEFYDLSAVCIRYVRPLLTPENILPIVLTRYNAADEVLTSLYLHVLLDNY DILIQDRQFEEIPGHLFRRLSLILYSKETVPNAPIPPMKNTLGKQLAWLAESGEYSDYEW VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPSFTTNEFDFSLRSWQKLLMGMYRR HLDTARDFSAEDIAIIFKMQQVLIMDGQLKREADEAFSNTNALRLLIYAVKHQIPELHER AISYVARNFSAMIRNDSQAWELISELPQTAVVSLFRTVTEQPTL

  • title: putative substrate binding site
  • coordinates: H65,A106,W107,G108
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_262440.1549 SARDFSAEDI0.998unspLdBPK_262440.1549 SARDFSAEDI0.998unspLdBPK_262440.1549 SARDFSAEDI0.998unspLdBPK_262440.137 SGSRYSAEFN0.992unspLdBPK_262440.1210 SSGGTSYSPG0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India