LdBPK_270470.1 | Vasohibin, putative

  • Computed_GO_Component_IDs:  GO:0005737      

  • Computed_GO_Components:  cytoplasm      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0045765      

  • Computed_GO_Processes:  regulation of angiogenesis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >LdBPK_270470.1 MSDKVLAIVEQLSQQNPFHDQEDLPDPPRPSETAIPRDRPSAEQVPFIQKQISILSYNHL PRTFFSLEKHRSLQSILFTAKEVLCEALPIRCLEATFVALHYTQTLRDIDRIPLSFKSEA NGHFYRHIVLVLRTRSTPALYGALGLSRKPTLMYKPLAYHSLFDVVMDYKHEYEALGHEL LDIKLGIAITHDEHSRWDPCWRFIALKLDHYRDGAKERSLKRSPKEHHKPTSLGTLQTHA RKPSSRVANDSFSSSNGGQTALPPLSPGPPRVETSAHCINGDVLLERSAKAVGASRSETV APEYSERFPPLSTCDSTLSPPNSVSNASPSLPHPPSTTDAAVETYAPLAQLLSNYMRLLP TISEQYYKGIATVDNNNRALKLCFMDLDTAERDSGAENQRRLQLIGEMQSPLSAEAKRVA ANRKLKPPKRDRGIAKNASGSGSGGARHRQINSGAAGRGKTNKRTSLALPPSVAAADGKG AVPSAVVQPHRSPQMQPSLVAPDLSYQSASLSAALMGNSHTSRPCMPFERIVVDAQNTGS SASPLCSGDGGTEGCLSPCDASPDSCSEDAFAAPPLTPRNYDARKPLSHYEPSLRSTSSA SDLFSTPFSLKATAMCSPRR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_270470.1.fa Sequence name : LdBPK_270470 Sequence length : 620 VALUES OF COMPUTED PARAMETERS Coef20 : 3.314 CoefTot : 0.112 ChDiff : 10 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.541 1.394 0.072 0.401 MesoH : -0.325 0.296 -0.256 0.156 MuHd_075 : 9.135 5.697 3.266 2.089 MuHd_095 : 24.774 17.181 7.184 4.457 MuHd_100 : 24.601 18.464 7.347 4.398 MuHd_105 : 26.150 20.092 7.549 4.988 Hmax_075 : 2.625 7.000 -0.585 3.360 Hmax_095 : 8.837 11.200 0.537 3.937 Hmax_100 : 10.300 14.300 1.065 4.380 Hmax_105 : 11.000 14.300 1.239 4.310 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9877 0.0123 DFMC : 0.9912 0.0088
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 620 LdBPK_270470.1 MSDKVLAIVEQLSQQNPFHDQEDLPDPPRPSETAIPRDRPSAEQVPFIQKQISILSYNHLPRTFFSLEKHRSLQSILFTA 80 KEVLCEALPIRCLEATFVALHYTQTLRDIDRIPLSFKSEANGHFYRHIVLVLRTRSTPALYGALGLSRKPTLMYKPLAYH 160 SLFDVVMDYKHEYEALGHELLDIKLGIAITHDEHSRWDPCWRFIALKLDHYRDGAKERSLKRSPKEHHKPTSLGTLQTHA 240 RKPSSRVANDSFSSSNGGQTALPPLSPGPPRVETSAHCINGDVLLERSAKAVGASRSETVAPEYSERFPPLSTCDSTLSP 320 PNSVSNASPSLPHPPSTTDAAVETYAPLAQLLSNYMRLLPTISEQYYKGIATVDNNNRALKLCFMDLDTAERDSGAENQR 400 RLQLIGEMQSPLSAEAKRVAANRKLKPPKRDRGIAKNASGSGSGGARHRQINSGAAGRGKTNKRTSLALPPSVAAADGKG 480 AVPSAVVQPHRSPQMQPSLVAPDLSYQSASLSAALMGNSHTSRPCMPFERIVVDAQNTGSSASPLCSGDGGTEGCLSPCD 560 ASPDSCSEDAFAAPPLTPRNYDARKPLSHYEPSLRSTSSASDLFSTPFSLKATAMCSPRR 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_270470.1 4 ---MSDK|VL 0.067 . LdBPK_270470.1 29 DLPDPPR|PS 0.091 . LdBPK_270470.1 37 SETAIPR|DR 0.098 . LdBPK_270470.1 39 TAIPRDR|PS 0.099 . LdBPK_270470.1 50 QVPFIQK|QI 0.059 . LdBPK_270470.1 62 SYNHLPR|TF 0.116 . LdBPK_270470.1 69 TFFSLEK|HR 0.057 . LdBPK_270470.1 71 FSLEKHR|SL 0.154 . LdBPK_270470.1 81 SILFTAK|EV 0.065 . LdBPK_270470.1 91 CEALPIR|CL 0.107 . LdBPK_270470.1 107 HYTQTLR|DI 0.111 . LdBPK_270470.1 111 TLRDIDR|IP 0.073 . LdBPK_270470.1 117 RIPLSFK|SE 0.072 . LdBPK_270470.1 126 ANGHFYR|HI 0.126 . LdBPK_270470.1 133 HIVLVLR|TR 0.068 . LdBPK_270470.1 135 VLVLRTR|ST 0.105 . LdBPK_270470.1 148 GALGLSR|KP 0.064 . LdBPK_270470.1 149 ALGLSRK|PT 0.075 . LdBPK_270470.1 155 KPTLMYK|PL 0.058 . LdBPK_270470.1 170 DVVMDYK|HE 0.065 . LdBPK_270470.1 184 HELLDIK|LG 0.058 . LdBPK_270470.1 196 THDEHSR|WD 0.081 . LdBPK_270470.1 202 RWDPCWR|FI 0.126 . LdBPK_270470.1 207 WRFIALK|LD 0.060 . LdBPK_270470.1 212 LKLDHYR|DG 0.105 . LdBPK_270470.1 216 HYRDGAK|ER 0.059 . LdBPK_270470.1 218 RDGAKER|SL 0.193 . LdBPK_270470.1 221 AKERSLK|RS 0.112 . LdBPK_270470.1 222 KERSLKR|SP 0.214 . LdBPK_270470.1 225 SLKRSPK|EH 0.162 . LdBPK_270470.1 229 SPKEHHK|PT 0.082 . LdBPK_270470.1 241 TLQTHAR|KP 0.098 . LdBPK_270470.1 242 LQTHARK|PS 0.087 . LdBPK_270470.1 246 ARKPSSR|VA 0.167 . LdBPK_270470.1 271 LSPGPPR|VE 0.077 . LdBPK_270470.1 287 GDVLLER|SA 0.182 . LdBPK_270470.1 290 LLERSAK|AV 0.417 . LdBPK_270470.1 296 KAVGASR|SE 0.099 . LdBPK_270470.1 307 APEYSER|FP 0.083 . LdBPK_270470.1 357 LLSNYMR|LL 0.106 . LdBPK_270470.1 368 ISEQYYK|GI 0.075 . LdBPK_270470.1 378 TVDNNNR|AL 0.086 . LdBPK_270470.1 381 NNNRALK|LC 0.143 . LdBPK_270470.1 392 DLDTAER|DS 0.100 . LdBPK_270470.1 400 SGAENQR|RL 0.092 . LdBPK_270470.1 401 GAENQRR|LQ 0.168 . LdBPK_270470.1 417 PLSAEAK|RV 0.096 . LdBPK_270470.1 418 LSAEAKR|VA 0.146 . LdBPK_270470.1 423 KRVAANR|KL 0.096 . LdBPK_270470.1 424 RVAANRK|LK 0.082 . LdBPK_270470.1 426 AANRKLK|PP 0.121 . LdBPK_270470.1 429 RKLKPPK|RD 0.066 . LdBPK_270470.1 430 KLKPPKR|DR 0.280 . LdBPK_270470.1 432 KPPKRDR|GI 0.119 . LdBPK_270470.1 436 RDRGIAK|NA 0.116 . LdBPK_270470.1 447 SGSGGAR|HR 0.094 . LdBPK_270470.1 449 SGGARHR|QI 0.114 . LdBPK_270470.1 458 NSGAAGR|GK 0.104 . LdBPK_270470.1 460 GAAGRGK|TN 0.060 . LdBPK_270470.1 463 GRGKTNK|RT 0.086 . LdBPK_270470.1 464 RGKTNKR|TS 0.155 . LdBPK_270470.1 479 VAAADGK|GA 0.077 . LdBPK_270470.1 491 AVVQPHR|SP 0.110 . LdBPK_270470.1 523 GNSHTSR|PC 0.148 . LdBPK_270470.1 530 PCMPFER|IV 0.155 . LdBPK_270470.1 579 APPLTPR|NY 0.087 . LdBPK_270470.1 584 PRNYDAR|KP 0.088 . LdBPK_270470.1 585 RNYDARK|PL 0.138 . LdBPK_270470.1 595 HYEPSLR|ST 0.129 . LdBPK_270470.1 611 STPFSLK|AT 0.059 . LdBPK_270470.1 619 TAMCSPR|R- 0.100 . LdBPK_270470.1 620 AMCSPRR|-- 0.135 . ____________________________^_________________

  • Fasta :-

    >LdBPK_270470.1 ATGTCGGATAAAGTGCTGGCCATTGTGGAGCAGCTGAGTCAGCAGAACCCTTTTCATGAT CAGGAAGACTTACCAGACCCTCCGCGGCCAAGCGAGACGGCTATTCCTCGCGATCGCCCT TCCGCGGAGCAGGTCCCATTCATTCAGAAGCAGATTAGCATCCTCAGCTACAACCACCTG CCCCGCACCTTCTTCTCCTTAGAAAAACACCGCTCGCTTCAGAGCATCCTGTTTACGGCG AAGGAGGTGCTGTGCGAGGCACTGCCCATCCGCTGCCTTGAGGCAACCTTTGTGGCACTG CACTACACCCAGACGCTGCGCGACATCGACCGCATTCCACTCTCCTTCAAGTCGGAGGCG AACGGCCACTTCTACCGCCACATCGTCCTCGTCCTCCGCACCCGCTCCACTCCAGCTCTC TACGGTGCCCTCGGGCTCAGCCGCAAGCCCACGCTCATGTACAAGCCACTAGCGTATCAC TCCCTCTTTGATGTAGTGATGGACTACAAGCACGAGTACGAGGCCCTCGGGCACGAGCTG CTTGACATAAAGCTGGGTATCGCCATCACACACGATGAGCACAGCCGCTGGGACCCGTGC TGGCGTTTCATTGCTCTCAAACTTGACCACTACCGCGACGGCGCCAAGGAAAGGTCACTG AAGCGCTCGCCGAAGGAGCACCACAAACCGACTTCGCTAGGCACGCTGCAAACGCACGCA CGCAAGCCCAGCAGCCGCGTGGCCAACGACTCATTCTCTTCCTCAAACGGCGGTCAGACC GCGCTGCCACCGCTCAGCCCAGGCCCGCCTCGCGTAGAGACCTCCGCGCACTGCATCAAT GGGGACGTGTTGCTAGAGCGCTCGGCGAAAGCTGTTGGCGCCTCGCGCAGCGAGACGGTG GCGCCTGAATATTCAGAGCGATTCCCTCCTCTGAGCACATGCGACTCCACCTTGTCGCCG CCAAACTCAGTTTCTAATGCGTCGCCTTCGCTTCCGCATCCGCCGAGCACGACAGACGCG GCTGTCGAGACGTACGCGCCACTGGCGCAGCTGCTGAGTAACTACATGCGACTCCTTCCC ACCATCAGCGAGCAGTACTACAAGGGCATCGCAACTGTGGACAACAACAACAGAGCGCTT AAGCTGTGCTTCATGGACCTCGATACCGCGGAAAGGGACTCCGGTGCGGAGAACCAGCGC CGACTGCAGCTCATCGGCGAGATGCAGTCCCCGCTGAGCGCGGAGGCAAAGCGGGTGGCG GCCAACCGAAAGTTGAAGCCACCCAAGAGGGATAGGGGCATCGCGAAGAACGCGAGTGGC AGTGGCAGTGGCGGCGCAAGGCATCGACAGATCAACAGCGGCGCTGCCGGCCGCGGAAAA ACGAACAAGCGCACCTCTCTGGCTTTGCCGCCCTCGGTTGCTGCGGCGGACGGCAAGGGG GCTGTCCCGTCAGCGGTGGTGCAGCCCCACCGCTCCCCTCAGATGCAGCCTTCTTTGGTG GCGCCGGACCTTTCTTACCAGTCCGCGTCCCTCTCTGCTGCTTTGATGGGCAACAGTCAC ACCTCTCGCCCGTGCATGCCTTTTGAGCGGATCGTGGTAGACGCGCAGAATACCGGCAGC TCAGCGTCGCCGCTGTGCAGCGGGGATGGCGGGACGGAAGGGTGCTTGAGCCCGTGCGAT GCCAGTCCTGACAGCTGCTCTGAGGACGCCTTTGCGGCGCCGCCCCTCACGCCGCGCAAC TACGATGCGCGGAAGCCGCTTTCCCACTATGAGCCGTCCCTACGCTCCACATCATCGGCA AGCGACCTCTTTTCCACGCCCTTCTCGCTAAAAGCTACCGCCATGTGCTCACCACGCCGG TAG
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  • Fasta :-

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_270470.1219 SAKERSLKRS0.995unspLdBPK_270470.1219 SAKERSLKRS0.995unspLdBPK_270470.1219 SAKERSLKRS0.995unspLdBPK_270470.1223 SSLKRSPKEH0.998unspLdBPK_270470.1295 SAVGASRSET0.993unspLdBPK_270470.1312 SFPPLSTCDS0.995unspLdBPK_270470.1394 SAERDSGAEN0.997unspLdBPK_270470.1413 SQSPLSAEAK0.994unspLdBPK_270470.1466 SNKRTSLALP0.991unspLdBPK_270470.1557 SEGCLSPCDA0.997unspLdBPK_270470.1565 SASPDSCSED0.992unspLdBPK_270470.1588 SRKPLSHYEP0.996unspLdBPK_270470.1609 SSTPFSLKAT0.991unspLdBPK_270470.141 SRDRPSAEQV0.993unspLdBPK_270470.1195 SHDEHSRWDP0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India