LdBPK_270500.1 | calpain-like cysteine peptidase, putative (fragment)

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  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_270500.1OTHER0.7789930.2180560.002952
No Results

  • Fasta :-

    >LdBPK_270500.1 MAASSIHETPDSGEVFADHEFNKNNAGITDDWISIRQLYPAGVNQPLLPEVFSREQFGQG NHYECFML
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_270500.1.fa Sequence name : LdBPK_270500 Sequence length : 68 VALUES OF COMPUTED PARAMETERS Coef20 : 3.071 CoefTot : 0.267 ChDiff : -7 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.118 0.282 -0.310 0.295 MesoH : -2.999 -2.132 -2.269 -1.601 MuHd_075 : 19.142 15.652 4.551 4.347 MuHd_095 : 30.018 10.743 7.463 3.524 MuHd_100 : 36.130 16.374 9.680 5.126 MuHd_105 : 37.061 18.535 10.436 5.703 Hmax_075 : 1.575 5.483 -1.219 2.730 Hmax_095 : 14.175 9.537 1.773 4.139 Hmax_100 : 12.800 9.000 1.890 4.390 Hmax_105 : 14.233 11.433 2.344 5.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8540 0.1460 DFMC : 0.8644 0.1356
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 68 LdBPK_270500.1 MAASSIHETPDSGEVFADHEFNKNNAGITDDWISIRQLYPAGVNQPLLPEVFSREQFGQGNHYECFML 80 .................................................................... 80 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_270500.1 23 ADHEFNK|NN 0.073 . LdBPK_270500.1 36 DDWISIR|QL 0.105 . LdBPK_270500.1 54 LPEVFSR|EQ 0.132 . ____________________________^_________________

  • Fasta :-

    >LdBPK_270500.1 ATGGCGGCATCGTCTATCCACGAAACGCCGGACAGCGGCGAGGTGTTTGCAGACCACGAG TTTAACAAGAACAACGCCGGCATCACCGATGATTGGATTTCGATCAGGCAGCTGTACCCA GCTGGTGTGAACCAGCCGCTGCTGCCCGAAGTATTCTCGCGCGAGCAGTTCGGCCAGGGC AACCACTATGAATGCTTCATGCTC
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  • Fasta :-

    MAASSIHETPDSGEVFADHEFNKNNAGITDDWISIRQLYPAGVNQPLLPEVFSREQFGQG NHYECFML

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India