LdBPK_280600.1 | major surface protease gp63, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_280600.1SP0.0018020.9981800.000017CS pos: 23-24. AGA-AQ. Pr: 0.5099
No Results

  • Fasta :-

    >LdBPK_280600.1 MRRTLLGIAVTFALVCCVVGAGAAQGDPERADSEEPRCGFDELEARMIGTRVSVISRVEP PTGELAVAAAATGAWQPIRIAVFTEDISNSSQHCTASGQSRPTFRGGRVTCSAADVLTRE KKRVLLELLIPSAVQLHQERLNVQRENGNIVVSPFIKKHSICGQFSIPEEHMKTGVPDAD FVLYMSAAPTSGSVIAWAVKCQSFDNGRSSVGVATISPKYITAEPKTVRVVAHEVLHALG FTRSVFKQQNMLVMASFRGKSPSPVIRSANVVAQAQLHYGCKTQASMELEDEGGKGTVSS HWKRRSAKDELMAGFSGVGVYSALTIAAMEDTGYYQGNYAKAEPMAYGHEVGCKLSSERC VIKSTSQIPAMFCDAPDAPWSCTSDRRGIGRCILTSYNSNLPTYFQYFGDPRLGGPDPLM DFCPFVRAADDTMCAAKTNALKGSVYGVMSRCVDTPAGFSIDDSAVQQHGICAEVQCGSS AYGVKINGASAFRDCPPGSTYNLSTLSPSFSKGHLVCPSYESVCAININASLYEEYSRLL TDHSVTGARTSVTAVVAVLLVVLFMG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_280600.1.fa Sequence name : LdBPK_280600 Sequence length : 566 VALUES OF COMPUTED PARAMETERS Coef20 : 4.959 CoefTot : 0.186 ChDiff : 1 ZoneTo : 26 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.612 0.635 0.803 MesoH : -0.005 0.524 -0.181 0.245 MuHd_075 : 22.952 17.127 3.778 6.253 MuHd_095 : 20.179 7.753 4.615 3.416 MuHd_100 : 20.727 9.714 3.982 4.707 MuHd_105 : 20.901 13.176 3.634 4.767 Hmax_075 : 18.900 28.000 5.146 7.700 Hmax_095 : 18.800 19.000 6.167 6.140 Hmax_100 : 19.200 23.800 5.650 6.810 Hmax_105 : 15.662 27.650 5.294 5.005 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8802 0.1198 DFMC : 0.8951 0.1049
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 566 LdBPK_280600.1 MRRTLLGIAVTFALVCCVVGAGAAQGDPERADSEEPRCGFDELEARMIGTRVSVISRVEPPTGELAVAAAATGAWQPIRI 80 AVFTEDISNSSQHCTASGQSRPTFRGGRVTCSAADVLTREKKRVLLELLIPSAVQLHQERLNVQRENGNIVVSPFIKKHS 160 ICGQFSIPEEHMKTGVPDADFVLYMSAAPTSGSVIAWAVKCQSFDNGRSSVGVATISPKYITAEPKTVRVVAHEVLHALG 240 FTRSVFKQQNMLVMASFRGKSPSPVIRSANVVAQAQLHYGCKTQASMELEDEGGKGTVSSHWKRRSAKDELMAGFSGVGV 320 YSALTIAAMEDTGYYQGNYAKAEPMAYGHEVGCKLSSERCVIKSTSQIPAMFCDAPDAPWSCTSDRRGIGRCILTSYNSN 400 LPTYFQYFGDPRLGGPDPLMDFCPFVRAADDTMCAAKTNALKGSVYGVMSRCVDTPAGFSIDDSAVQQHGICAEVQCGSS 480 AYGVKINGASAFRDCPPGSTYNLSTLSPSFSKGHLVCPSYESVCAININASLYEEYSRLLTDHSVTGARTSVTAVVAVLL 560 VVLFMG 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................P............... 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_280600.1 2 -----MR|RT 0.084 . LdBPK_280600.1 3 ----MRR|TL 0.140 . LdBPK_280600.1 30 AQGDPER|AD 0.094 . LdBPK_280600.1 37 ADSEEPR|CG 0.138 . LdBPK_280600.1 46 FDELEAR|MI 0.110 . LdBPK_280600.1 51 ARMIGTR|VS 0.081 . LdBPK_280600.1 57 RVSVISR|VE 0.078 . LdBPK_280600.1 79 GAWQPIR|IA 0.105 . LdBPK_280600.1 101 TASGQSR|PT 0.176 . LdBPK_280600.1 105 QSRPTFR|GG 0.097 . LdBPK_280600.1 108 PTFRGGR|VT 0.189 . LdBPK_280600.1 119 AADVLTR|EK 0.085 . LdBPK_280600.1 121 DVLTREK|KR 0.049 . LdBPK_280600.1 122 VLTREKK|RV 0.245 . LdBPK_280600.1 123 LTREKKR|VL 0.154 . LdBPK_280600.1 140 VQLHQER|LN 0.079 . LdBPK_280600.1 145 ERLNVQR|EN 0.125 . LdBPK_280600.1 157 VVSPFIK|KH 0.069 . LdBPK_280600.1 158 VSPFIKK|HS 0.112 . LdBPK_280600.1 173 IPEEHMK|TG 0.064 . LdBPK_280600.1 200 VIAWAVK|CQ 0.059 . LdBPK_280600.1 208 QSFDNGR|SS 0.118 . LdBPK_280600.1 219 VATISPK|YI 0.082 . LdBPK_280600.1 226 YITAEPK|TV 0.080 . LdBPK_280600.1 229 AEPKTVR|VV 0.100 . LdBPK_280600.1 243 HALGFTR|SV 0.307 . LdBPK_280600.1 247 FTRSVFK|QQ 0.063 . LdBPK_280600.1 258 LVMASFR|GK 0.121 . LdBPK_280600.1 260 MASFRGK|SP 0.142 . LdBPK_280600.1 267 SPSPVIR|SA 0.308 . LdBPK_280600.1 282 QLHYGCK|TQ 0.062 . LdBPK_280600.1 295 LEDEGGK|GT 0.054 . LdBPK_280600.1 303 TVSSHWK|RR 0.081 . LdBPK_280600.1 304 VSSHWKR|RS 0.275 . LdBPK_280600.1 305 SSHWKRR|SA 0.671 *ProP* LdBPK_280600.1 308 WKRRSAK|DE 0.278 . LdBPK_280600.1 341 YQGNYAK|AE 0.064 . LdBPK_280600.1 354 GHEVGCK|LS 0.063 . LdBPK_280600.1 359 CKLSSER|CV 0.135 . LdBPK_280600.1 363 SERCVIK|ST 0.156 . LdBPK_280600.1 386 WSCTSDR|RG 0.073 . LdBPK_280600.1 387 SCTSDRR|GI 0.199 . LdBPK_280600.1 391 DRRGIGR|CI 0.123 . LdBPK_280600.1 412 QYFGDPR|LG 0.081 . LdBPK_280600.1 427 DFCPFVR|AA 0.107 . LdBPK_280600.1 437 DTMCAAK|TN 0.061 . LdBPK_280600.1 442 AKTNALK|GS 0.063 . LdBPK_280600.1 451 VYGVMSR|CV 0.113 . LdBPK_280600.1 485 SSAYGVK|IN 0.075 . LdBPK_280600.1 493 NGASAFR|DC 0.094 . LdBPK_280600.1 512 LSPSFSK|GH 0.058 . LdBPK_280600.1 538 LYEEYSR|LL 0.078 . LdBPK_280600.1 549 HSVTGAR|TS 0.086 . ____________________________^_________________

  • Fasta :-

    >LdBPK_280600.1 ATGCGCCGCACGCTGTTGGGGATCGCGGTGACCTTTGCGTTGGTGTGTTGCGTTGTCGGC GCTGGCGCAGCGCAGGGGGACCCGGAGCGAGCCGACTCAGAGGAGCCGCGCTGCGGGTTT GACGAGCTGGAGGCGCGCATGATCGGCACCCGCGTGAGTGTGATAAGCCGTGTAGAGCCG CCTACCGGGGAGCTTGCGGTTGCGGCTGCCGCAACGGGGGCCTGGCAGCCCATCCGCATT GCCGTCTTCACAGAGGACATCTCGAACAGCAGCCAGCACTGCACCGCTTCGGGCCAGAGT CGGCCCACCTTCCGTGGCGGCAGGGTGACCTGCAGCGCAGCGGACGTTCTCACAAGAGAA AAGAAACGGGTGCTGCTGGAGCTGCTGATTCCATCCGCAGTACAGCTGCACCAAGAGCGG CTGAACGTGCAGCGGGAGAACGGCAACATAGTTGTTAGCCCCTTTATAAAGAAACACAGT ATCTGCGGTCAGTTCAGCATACCCGAAGAACACATGAAGACCGGTGTGCCGGACGCCGAC TTTGTTCTGTACATGTCTGCTGCGCCAACATCTGGCAGTGTCATCGCGTGGGCGGTGAAG TGTCAGAGCTTCGACAATGGCCGCTCGTCTGTGGGCGTGGCGACCATCTCACCCAAGTAC ATCACCGCCGAGCCGAAGACCGTGCGCGTCGTCGCGCACGAGGTGTTGCATGCACTCGGC TTCACGAGGTCAGTTTTCAAGCAACAGAACATGCTGGTGATGGCTTCTTTTCGAGGCAAG AGCCCCTCACCTGTCATTCGCAGCGCAAACGTGGTTGCGCAGGCGCAGCTACATTACGGC TGCAAAACGCAGGCTTCCATGGAGCTGGAAGACGAGGGTGGAAAGGGAACCGTTTCGTCA CACTGGAAGCGCCGCAGCGCCAAAGACGAGCTGATGGCGGGCTTCAGCGGCGTCGGCGTC TACTCGGCGCTCACCATCGCCGCCATGGAGGACACGGGCTACTACCAGGGCAACTACGCC AAGGCGGAGCCGATGGCGTACGGCCACGAAGTGGGCTGCAAACTGAGTTCCGAGCGGTGC GTCATCAAAAGCACTTCACAGATTCCTGCCATGTTTTGCGATGCCCCCGACGCTCCGTGG AGCTGCACCTCTGATCGCCGAGGCATCGGGCGGTGCATCCTTACCTCTTACAATTCCAAC CTGCCCACCTATTTTCAATACTTCGGTGACCCGAGGTTGGGTGGCCCAGATCCCCTGATG GACTTCTGCCCGTTTGTGAGGGCTGCCGACGACACAATGTGTGCCGCTAAAACGAACGCC CTGAAGGGCAGCGTGTATGGCGTCATGTCGCGCTGTGTCGACACACCGGCAGGCTTTTCC ATTGATGACTCGGCGGTCCAGCAGCACGGCATCTGTGCTGAGGTGCAGTGCGGCAGCTCC GCGTACGGCGTCAAAATAAATGGCGCGTCTGCGTTCCGGGATTGTCCGCCTGGCAGCACC TACAACCTGTCGACATTGAGCCCGTCCTTCTCTAAAGGGCATTTGGTGTGCCCCTCTTAT GAGTCCGTGTGCGCCATCAACATAAACGCCTCGCTGTACGAAGAATACAGTAGGCTTCTC ACCGACCACAGCGTGACTGGTGCGCGGACAAGTGTGACGGCGGTGGTGGCAGTGCTTCTC GTGGTGCTTTTCATGGGCTGA
  • Download Fasta

  • Fasta :-

    MRRTLLGIAVTFALVCCVVGAGAAQGDPERADSEEPRCGFDELEARMIGTRVSVISRVEP PTGELAVAAAATGAWQPIRIAVFTEDISNSSQHCTASGQSRPTFRGGRVTCSAADVLTRE KKRVLLELLIPSAVQLHQERLNVQRENGNIVVSPFIKKHSICGQFSIPEEHMKTGVPDAD FVLYMSAAPTSGSVIAWAVKCQSFDNGRSSVGVATISPKYITAEPKTVRVVAHEVLHALG FTRSVFKQQNMLVMASFRGKSPSPVIRSANVVAQAQLHYGCKTQASMELEDEGGKGTVSS HWKRRSAKDELMAGFSGVGVYSALTIAAMEDTGYYQGNYAKAEPMAYGHEVGCKLSSERC VIKSTSQIPAMFCDAPDAPWSCTSDRRGIGRCILTSYNSNLPTYFQYFGDPRLGGPDPLM DFCPFVRAADDTMCAAKTNALKGSVYGVMSRCVDTPAGFSIDDSAVQQHGICAEVQCGSS AYGVKINGASAFRDCPPGSTYNLSTLSPSFSKGHLVCPSYESVCAININASLYEEYSRLL TDHSVTGARTSVTAVVAVLLVVLFMG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_280600.1210 SNGRSSVGVA0.993unspLdBPK_280600.1210 SNGRSSVGVA0.993unspLdBPK_280600.1210 SNGRSSVGVA0.993unspLdBPK_280600.1306 SWKRRSAKDE0.997unspLdBPK_280600.133 SERADSEEPR0.996unspLdBPK_280600.156 SVSVISRVEP0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India