LdBPK_291360.1 | ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100), putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:  GO:0019538      

  • Computed_GO_Processes:  protein metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_291360.1OTHER0.9997170.0001690.000114
No Results

  • Fasta :-

    >LdBPK_291360.1 MTTQQPEWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLGAASV KDGLEARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKE VGRILDAAGAGKKAIRATLLEMRKGKKINSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD MGALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKP LLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVEECTSILRGLKDRYEQHH GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ LEIEEKALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE KKVKLERAERMRDMETAADLKYNVIPILQDRIRSLKEEIEKQKATMLQGTVTETDIATVV SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGS FLFLGPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG QLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCNTIIIMTSNL GAQYLQNMDTSPKAYEVAQTQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLIT EELNGRLKDQSIRVSLTEEAKNYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS PNSTVKVTLSSNHKKLSFSVKRTAAQT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_291360.1.fa Sequence name : LdBPK_291360 Sequence length : 867 VALUES OF COMPUTED PARAMETERS Coef20 : 4.154 CoefTot : -0.563 ChDiff : -2 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.953 1.400 0.063 0.538 MesoH : -0.999 0.286 -0.443 0.161 MuHd_075 : 25.353 16.075 5.979 5.788 MuHd_095 : 33.410 14.180 5.903 5.562 MuHd_100 : 34.867 13.515 6.982 5.045 MuHd_105 : 30.372 10.924 7.170 3.703 Hmax_075 : 3.850 2.975 -1.665 2.161 Hmax_095 : 10.600 6.800 -1.131 3.580 Hmax_100 : 10.200 4.300 -1.560 2.910 Hmax_105 : 9.100 3.033 -0.389 2.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6159 0.3841 DFMC : 0.7360 0.2640
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 867 LdBPK_291360.1 MTTQQPEWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLGAASVKDGLEARVDAIPTQMPAPTQ 80 PRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKEVGRILDAAGAGKKAIRATLLEMRKGKKINSDFQDDNYESL 160 NKYAVDLCKQAEDGKLDPVIGRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD 240 MGALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGELRTIGATTLEEYRQ 320 YVEKDAAFERRFMPVQVNEPSVEECTSILRGLKDRYEQHHGVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANV 400 RVTLSSRPAEIDALERKKRQLEIEEKALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE 480 KKVKLERAERMRDMETAADLKYNVIPILQDRIRSLKEEIEKQKATMLQGTVTETDIATVVSRWTNIPVTKLSQTERERLL 560 HLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGSFLFLGPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQ 640 HSVARLIGAPPGYVGHEEGGQLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCNTIIIMTSNL 720 GAQYLQNMDTSPKAYEVAQTQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLITEELNGRLKDQSIRVSLTEEA 800 KNYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELSPNSTVKVTLSSNHKKLSFSVKRTAAQT 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................P............................................................. 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_291360.1 18 ASDLMAR|TA 0.085 . LdBPK_291360.1 24 RTAALAR|KK 0.087 . LdBPK_291360.1 25 TAALARK|KA 0.115 . LdBPK_291360.1 26 AALARKK|AN 0.104 . LdBPK_291360.1 50 ENSLASR|VV 0.150 . LdBPK_291360.1 53 LASRVVR|KL 0.426 . LdBPK_291360.1 54 ASRVVRK|LG 0.097 . LdBPK_291360.1 61 LGAASVK|DG 0.072 . LdBPK_291360.1 67 KDGLEAR|VD 0.077 . LdBPK_291360.1 82 PAPTQPR|PN 0.112 . LdBPK_291360.1 89 PNSDMMR|VM 0.120 . LdBPK_291360.1 98 NTAEQER|VA 0.082 . LdBPK_291360.1 119 LALHESK|EV 0.093 . LdBPK_291360.1 123 ESKEVGR|IL 0.135 . LdBPK_291360.1 132 DAAGAGK|KA 0.068 . LdBPK_291360.1 133 AAGAGKK|AI 0.108 . LdBPK_291360.1 136 AGKKAIR|AT 0.082 . LdBPK_291360.1 143 ATLLEMR|KG 0.075 . LdBPK_291360.1 144 TLLEMRK|GK 0.071 . LdBPK_291360.1 146 LEMRKGK|KI 0.149 . LdBPK_291360.1 147 EMRKGKK|IN 0.112 . LdBPK_291360.1 162 NYESLNK|YA 0.062 . LdBPK_291360.1 169 YAVDLCK|QA 0.082 . LdBPK_291360.1 175 KQAEDGK|LD 0.060 . LdBPK_291360.1 182 LDPVIGR|AD 0.092 . LdBPK_291360.1 188 RADEILR|TI 0.069 . LdBPK_291360.1 191 EILRTIR|VL 0.151 . LdBPK_291360.1 195 TIRVLSR|RT 0.081 . LdBPK_291360.1 196 IRVLSRR|TK 0.116 . LdBPK_291360.1 198 VLSRRTK|NN 0.125 . LdBPK_291360.1 211 GEPGVGK|TA 0.068 . LdBPK_291360.1 224 IAQQVVR|GD 0.097 . LdBPK_291360.1 235 DTLSGIR|IF 0.070 . LdBPK_291360.1 249 ALIAGAK|YR 0.071 . LdBPK_291360.1 251 IAGAKYR|GE 0.114 . LdBPK_291360.1 257 RGEFEER|LK 0.071 . LdBPK_291360.1 259 EFEERLK|AV 0.066 . LdBPK_291360.1 266 AVLNEVK|ES 0.058 . LdBPK_291360.1 271 VKESDNK|II 0.057 . LdBPK_291360.1 287 LVLGAGK|SD 0.078 . LdBPK_291360.1 299 DAANLLK|PL 0.062 . LdBPK_291360.1 304 LKPLLAR|GE 0.082 . LdBPK_291360.1 308 LARGELR|TI 0.118 . LdBPK_291360.1 319 TTLEEYR|QY 0.075 . LdBPK_291360.1 324 YRQYVEK|DA 0.100 . LdBPK_291360.1 330 KDAAFER|RF 0.110 . LdBPK_291360.1 331 DAAFERR|FM 0.196 . LdBPK_291360.1 350 ECTSILR|GL 0.071 . LdBPK_291360.1 353 SILRGLK|DR 0.118 . LdBPK_291360.1 355 LRGLKDR|YE 0.125 . LdBPK_291360.1 367 GVQITDK|AV 0.076 . LdBPK_291360.1 378 AAQLAGR|YI 0.085 . LdBPK_291360.1 383 GRYITNR|FL 0.120 . LdBPK_291360.1 388 NRFLPDK|AI 0.074 . LdBPK_291360.1 401 EACANVR|VT 0.080 . LdBPK_291360.1 407 RVTLSSR|PA 0.082 . LdBPK_291360.1 416 EIDALER|KK 0.076 . LdBPK_291360.1 417 IDALERK|KR 0.072 . LdBPK_291360.1 418 DALERKK|RQ 0.078 . LdBPK_291360.1 419 ALERKKR|QL 0.763 *ProP* LdBPK_291360.1 426 QLEIEEK|AL 0.062 . LdBPK_291360.1 430 EEKALQR|DK 0.108 . LdBPK_291360.1 432 KALQRDK|DA 0.098 . LdBPK_291360.1 437 DKDASAK|ER 0.063 . LdBPK_291360.1 439 DASAKER|LK 0.094 . LdBPK_291360.1 441 SAKERLK|AV 0.078 . LdBPK_291360.1 444 ERLKAVK|AE 0.069 . LdBPK_291360.1 449 VKAEIQK|VE 0.062 . LdBPK_291360.1 453 IQKVEEK|LG 0.053 . LdBPK_291360.1 460 LGPLLAK|YE 0.064 . LdBPK_291360.1 465 AKYEQER|GR 0.108 . LdBPK_291360.1 467 YEQERGR|ID 0.097 . LdBPK_291360.1 477 LQATQAK|LD 0.072 . LdBPK_291360.1 481 QAKLDEK|KV 0.064 . LdBPK_291360.1 482 AKLDEKK|VK 0.072 . LdBPK_291360.1 484 LDEKKVK|LE 0.070 . LdBPK_291360.1 487 KKVKLER|AE 0.075 . LdBPK_291360.1 490 KLERAER|MR 0.204 . LdBPK_291360.1 492 ERAERMR|DM 0.167 . LdBPK_291360.1 501 ETAADLK|YN 0.057 . LdBPK_291360.1 511 IPILQDR|IR 0.096 . LdBPK_291360.1 513 ILQDRIR|SL 0.143 . LdBPK_291360.1 516 DRIRSLK|EE 0.128 . LdBPK_291360.1 521 LKEEIEK|QK 0.066 . LdBPK_291360.1 523 EEIEKQK|AT 0.070 . LdBPK_291360.1 542 IATVVSR|WT 0.089 . LdBPK_291360.1 550 TNIPVTK|LS 0.070 . LdBPK_291360.1 556 KLSQTER|ER 0.086 . LdBPK_291360.1 558 SQTERER|LL 0.075 . LdBPK_291360.1 569 ADQLHLR|VK 0.109 . LdBPK_291360.1 571 QLHLRVK|GQ 0.072 . LdBPK_291360.1 579 QDEAVSR|VA 0.140 . LdBPK_291360.1 586 VAEAILR|SR 0.082 . LdBPK_291360.1 588 EAILRSR|AG 0.065 . LdBPK_291360.1 593 SRAGLAR|SD 0.223 . LdBPK_291360.1 596 GLARSDR|PT 0.396 . LdBPK_291360.1 611 GPTGVGK|TE 0.058 . LdBPK_291360.1 616 GKTELSK|AV 0.072 . LdBPK_291360.1 627 ELFDDAK|YM 0.064 . LdBPK_291360.1 631 DAKYMVR|LD 0.072 . LdBPK_291360.1 645 EQHSVAR|LI 0.129 . LdBPK_291360.1 667 QLTEPVR|RR 0.063 . LdBPK_291360.1 668 LTEPVRR|RP 0.101 . LdBPK_291360.1 669 TEPVRRR|PY 0.171 . LdBPK_291360.1 681 LLDEVEK|AH 0.061 . LdBPK_291360.1 698 QVLDDGR|LT 0.082 . LdBPK_291360.1 705 LTDSHGR|TV 0.093 . LdBPK_291360.1 733 NMDTSPK|AY 0.076 . LdBPK_291360.1 747 QVMGEVR|KF 0.083 . LdBPK_291360.1 748 VMGEVRK|FF 0.107 . LdBPK_291360.1 751 EVRKFFR|PE 0.090 . LdBPK_291360.1 757 RPEFINR|LD 0.100 . LdBPK_291360.1 765 DDIILFR|SL 0.176 . LdBPK_291360.1 770 FRSLGLK|EM 0.069 . LdBPK_291360.1 786 TEELNGR|LK 0.090 . LdBPK_291360.1 788 ELNGRLK|DQ 0.068 . LdBPK_291360.1 793 LKDQSIR|VS 0.080 . LdBPK_291360.1 801 SLTEEAK|NY 0.054 . LdBPK_291360.1 816 DADMGAR|PL 0.082 . LdBPK_291360.1 819 MGARPLR|RW 0.250 . LdBPK_291360.1 820 GARPLRR|WV 0.401 . LdBPK_291360.1 824 LRRWVEK|NI 0.101 . LdBPK_291360.1 832 ITTELSR|MI 0.092 . LdBPK_291360.1 846 SPNSTVK|VT 0.070 . LdBPK_291360.1 854 TLSSNHK|KL 0.071 . LdBPK_291360.1 855 LSSNHKK|LS 0.160 . LdBPK_291360.1 861 KLSFSVK|RT 0.086 . LdBPK_291360.1 862 LSFSVKR|TA 0.226 . ____________________________^_________________

  • Fasta :-

    >LdBPK_291360.1 ATGACGACACAGCAGCCAGAATGGACGCAGGCGGCGTCGGACTTGATGGCTCGCACCGCG GCATTGGCACGCAAGAAGGCAAACGGCTACCTCGACCCCGTGCACCTCGCCTACGTCATG TTTGAAGATGAAAACAGTCTTGCCTCTCGTGTCGTGCGCAAGCTCGGGGCCGCCTCAGTG AAGGATGGACTGGAGGCGCGTGTTGACGCGATTCCCACGCAGATGCCTGCGCCCACGCAG CCGCGGCCCAACTCGGACATGATGCGTGTAATGAACACGGCGGAGCAGGAGCGTGTTGCC CTCGGTGACACCCTCATGGCCGCTGACCACTTTCTCCTGGCCCTGCACGAGAGCAAGGAG GTTGGCAGAATCCTGGATGCTGCAGGGGCTGGCAAGAAGGCGATTCGCGCCACACTGCTC GAGATGCGCAAGGGGAAAAAGATAAACTCCGACTTCCAAGACGACAACTACGAGTCGCTG AACAAGTACGCAGTTGATCTCTGCAAGCAGGCGGAGGACGGAAAGCTGGACCCGGTTATT GGTCGCGCAGACGAGATTCTGCGCACTATCCGTGTGCTGTCACGTCGCACCAAGAACAAC CCGGTGCTGATCGGGGAGCCTGGAGTGGGTAAGACCGCGATTGTGGAAGGCATTGCGCAG CAGGTGGTGCGAGGCGACGTGCCGGACACTCTCTCAGGTATTCGCATCTTCTCACTGGAC ATGGGCGCGCTGATCGCCGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGCCTGAAGGCC GTGCTGAATGAGGTGAAGGAAAGCGACAATAAGATCATCCTCTTCATTGACGAGATCCAC CTCGTGCTCGGCGCCGGCAAGTCCGACGGCGCGATGGACGCCGCGAATCTGCTGAAGCCG CTGCTGGCCCGTGGCGAGCTGCGCACGATCGGTGCCACGACGCTCGAGGAGTACCGCCAG TACGTGGAGAAGGACGCCGCCTTCGAGCGCCGCTTCATGCCAGTGCAGGTGAATGAGCCA TCTGTCGAGGAGTGTACGAGCATCCTGCGTGGTCTGAAAGACCGCTACGAGCAGCACCAC GGTGTGCAGATCACGGACAAGGCCGTTGTGGTGGCGGCGCAGTTGGCTGGCCGCTACATT ACGAACCGCTTTCTGCCGGATAAGGCTATTGACCTTATTGATGAAGCGTGCGCCAACGTG CGCGTGACGTTGTCGTCGCGGCCGGCCGAAATCGACGCCCTCGAGCGCAAGAAGCGCCAG CTGGAGATCGAGGAGAAGGCGCTGCAGCGCGACAAGGACGCATCGGCCAAGGAGCGGCTG AAAGCCGTGAAGGCGGAGATTCAGAAGGTGGAGGAGAAGCTTGGCCCACTTCTTGCCAAG TACGAGCAAGAGCGTGGCCGTATCGACGAGCTGCAGGCAACGCAGGCAAAGCTGGACGAG AAGAAGGTGAAGCTAGAGCGGGCGGAGCGGATGCGTGACATGGAGACGGCAGCAGATCTT AAATACAATGTCATCCCGATCCTCCAGGACAGGATCCGATCCCTCAAGGAGGAGATCGAG AAGCAGAAGGCGACGATGCTGCAGGGCACCGTGACTGAGACGGACATCGCCACCGTTGTG TCGCGCTGGACCAATATCCCGGTGACAAAGCTGAGCCAGACCGAACGCGAGCGCCTGCTG CACCTGGCCGACCAACTGCACCTCCGTGTGAAGGGCCAGGATGAGGCGGTGAGCCGTGTC GCGGAGGCTATTCTGCGCTCACGTGCGGGCCTGGCCCGCTCGGACCGGCCCACCGGCTCT TTCCTGTTTCTCGGCCCCACCGGCGTGGGCAAGACAGAGCTGTCCAAGGCCGTCGCCTCA GAGCTCTTCGACGATGCCAAGTACATGGTGCGACTGGACATGAGCGAGTACATGGAGCAG CACTCTGTGGCGCGGCTGATCGGCGCCCCGCCGGGGTACGTCGGCCACGAAGAAGGTGGC CAGCTGACGGAGCCGGTGCGCCGTCGCCCATACACGGTGGTGCTGCTGGATGAGGTGGAG AAGGCGCACCCGAACGTCTTCAACGTACTGCTGCAGGTGCTTGATGACGGGCGGTTGACT GACTCGCACGGCCGAACCGTGAATTTCTGCAACACGATCATCATCATGACATCCAACTTG GGTGCGCAGTATCTGCAGAACATGGACACCTCACCGAAGGCCTACGAAGTGGCACAGACA CAGGTGATGGGCGAGGTGAGGAAGTTCTTTCGCCCGGAGTTCATCAACCGACTGGATGAC ATCATCCTCTTCCGCTCTCTGGGCTTAAAGGAGATGACCGGCATCATCGACCTCATCACC GAGGAGCTCAATGGCCGTCTCAAGGACCAGTCCATCCGGGTTTCCCTCACAGAAGAGGCT AAGAACTACGTATTGGAGTCCGCCTTCGACGCGGATATGGGCGCTCGCCCACTACGGCGC TGGGTTGAGAAGAACATCACAACAGAGCTCAGCCGCATGATCATCTCGCAAGAGCTGTCG CCGAACAGCACGGTGAAAGTGACTCTCAGCAGCAATCATAAAAAGCTCTCCTTCTCGGTG AAGCGGACGGCAGCGCAGACATGA
  • Download Fasta

  • Fasta :-

    MTTQQPEWTQAASDLMARTAALARKKANGYLDPVHLAYVMFEDENSLASRVVRKLGAASV KDGLEARVDAIPTQMPAPTQPRPNSDMMRVMNTAEQERVALGDTLMAADHFLLALHESKE VGRILDAAGAGKKAIRATLLEMRKGKKINSDFQDDNYESLNKYAVDLCKQAEDGKLDPVI GRADEILRTIRVLSRRTKNNPVLIGEPGVGKTAIVEGIAQQVVRGDVPDTLSGIRIFSLD MGALIAGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKP LLARGELRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVEECTSILRGLKDRYEQHH GVQITDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQ LEIEEKALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE KKVKLERAERMRDMETAADLKYNVIPILQDRIRSLKEEIEKQKATMLQGTVTETDIATVV SRWTNIPVTKLSQTERERLLHLADQLHLRVKGQDEAVSRVAEAILRSRAGLARSDRPTGS FLFLGPTGVGKTELSKAVASELFDDAKYMVRLDMSEYMEQHSVARLIGAPPGYVGHEEGG QLTEPVRRRPYTVVLLDEVEKAHPNVFNVLLQVLDDGRLTDSHGRTVNFCNTIIIMTSNL GAQYLQNMDTSPKAYEVAQTQVMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLIT EELNGRLKDQSIRVSLTEEAKNYVLESAFDADMGARPLRRWVEKNITTELSRMIISQELS PNSTVKVTLSSNHKKLSFSVKRTAAQT

  • title: ATP binding site
  • coordinates: E206,P207,G208,V209,G210,K211,T212,A213,D277,T314
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_291360.1514 SDRIRSLKEE0.996unspLdBPK_291360.1514 SDRIRSLKEE0.996unspLdBPK_291360.1514 SDRIRSLKEE0.996unspLdBPK_291360.1731 SNMDTSPKAY0.993unspLdBPK_291360.1795 SSIRVSLTEE0.992unspLdBPK_291360.1859 SKLSFSVKRT0.997unspLdBPK_291360.159 SLGAASVKDG0.998unspLdBPK_291360.1435 SDKDASAKER0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India