LdBPK_292350.1 | Aminopeptidase M1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008237      GO:0008270      

  • Computed_GO_Functions:  metallopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_292350.1OTHER0.9999080.0000570.000035
No Results

  • Fasta :-

    >LdBPK_292350.1 MSMTKSVKLENPYVPSGYDLRVAVDLSTWSYAAVETVHLQRCPAFPDCDTIQLHAAPSIE VTSVKGATLVRRDNTAHTLVLKLDAETMALADPTLQFEFTHVIQKELRGFYQVNFKHNGK QHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSEEHYVVLSNGPLASKTVKGDT VVHTFQTVPRCPPYLTACVVGELEHISTVVNGIPVSVYATLGKVGRAQFALSTTVFALEF FEKFFQCKYPLPKLDVVAIPDFPIGGMENWGCITCAEAILVDPQQSSVEAKRGTSNLVCH EVSHNWFGNLVAINWWEGLWLKEGFASWCGYHATHAYAPQWNALDAAALQVVSALNDDIY EHSHPVEVPIHDPGDITQIFDSISYNKGMGLVFMLQAFLGDKWESAVAHYIGKHQFGDTK TVQLWEALEESSKLPITEALTSFTTQMGYPMIHVARQDENTIVVTQEPCRFATASAKSMR TWCVPLVVEGIDPAAGRATPMLRCDNSMEVTLPAGIAKGAFANANPRRTGFYRCRYDNAI FDAWLANYSQLSPADRRSLFSDTLAAIRMGYDDIPRLARIAKAVSAFEKDIYVLREYMQT MGTFLRSFDDASLTKSLTKELHGFLIPVAESFIGVSPQDDSASLRRNFYLDASISTLLNS WEPAEVSAHPVIQWALQQAQDFLSGAGFNAGTLSSCLRAWVRMADPADLPARNAQLYAKL QEVDGNEELCRSLVLAMTSGASVDFALDIMKKCIENDGVRSQYGGQVFWSLASNPAISGA EVWQAFQNNFDAVNAQWGGGQFRIQAIVGFLGEALSGDAAADEFEAFFETHPLPNARLAI GRAAEELRIRSWLNKKWKASLPHVFCRH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_292350.1.fa Sequence name : LdBPK_292350 Sequence length : 868 VALUES OF COMPUTED PARAMETERS Coef20 : 3.326 CoefTot : 0.120 ChDiff : -21 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.229 1.453 0.165 0.584 MesoH : 0.062 0.687 -0.190 0.335 MuHd_075 : 11.351 5.760 3.022 2.304 MuHd_095 : 6.821 7.562 3.063 2.902 MuHd_100 : 10.740 9.954 4.492 3.572 MuHd_105 : 14.245 11.450 5.482 3.740 Hmax_075 : 3.325 2.700 -1.557 1.810 Hmax_095 : 4.100 3.200 -1.162 2.390 Hmax_100 : 4.100 4.300 -1.209 2.660 Hmax_105 : 8.517 6.650 0.019 3.313 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9706 0.0294 DFMC : 0.9368 0.0632
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 868 LdBPK_292350.1 MSMTKSVKLENPYVPSGYDLRVAVDLSTWSYAAVETVHLQRCPAFPDCDTIQLHAAPSIEVTSVKGATLVRRDNTAHTLV 80 LKLDAETMALADPTLQFEFTHVIQKELRGFYQVNFKHNGKQHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSE 160 EHYVVLSNGPLASKTVKGDTVVHTFQTVPRCPPYLTACVVGELEHISTVVNGIPVSVYATLGKVGRAQFALSTTVFALEF 240 FEKFFQCKYPLPKLDVVAIPDFPIGGMENWGCITCAEAILVDPQQSSVEAKRGTSNLVCHEVSHNWFGNLVAINWWEGLW 320 LKEGFASWCGYHATHAYAPQWNALDAAALQVVSALNDDIYEHSHPVEVPIHDPGDITQIFDSISYNKGMGLVFMLQAFLG 400 DKWESAVAHYIGKHQFGDTKTVQLWEALEESSKLPITEALTSFTTQMGYPMIHVARQDENTIVVTQEPCRFATASAKSMR 480 TWCVPLVVEGIDPAAGRATPMLRCDNSMEVTLPAGIAKGAFANANPRRTGFYRCRYDNAIFDAWLANYSQLSPADRRSLF 560 SDTLAAIRMGYDDIPRLARIAKAVSAFEKDIYVLREYMQTMGTFLRSFDDASLTKSLTKELHGFLIPVAESFIGVSPQDD 640 SASLRRNFYLDASISTLLNSWEPAEVSAHPVIQWALQQAQDFLSGAGFNAGTLSSCLRAWVRMADPADLPARNAQLYAKL 720 QEVDGNEELCRSLVLAMTSGASVDFALDIMKKCIENDGVRSQYGGQVFWSLASNPAISGAEVWQAFQNNFDAVNAQWGGG 800 QFRIQAIVGFLGEALSGDAAADEFEAFFETHPLPNARLAIGRAAEELRIRSWLNKKWKASLPHVFCRH 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .................................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_292350.1 5 --MSMTK|SV 0.089 . LdBPK_292350.1 8 SMTKSVK|LE 0.063 . LdBPK_292350.1 21 PSGYDLR|VA 0.081 . LdBPK_292350.1 41 ETVHLQR|CP 0.069 . LdBPK_292350.1 65 IEVTSVK|GA 0.077 . LdBPK_292350.1 71 KGATLVR|RD 0.077 . LdBPK_292350.1 72 GATLVRR|DN 0.184 . LdBPK_292350.1 82 AHTLVLK|LD 0.055 . LdBPK_292350.1 105 FTHVIQK|EL 0.060 . LdBPK_292350.1 108 VIQKELR|GF 0.105 . LdBPK_292350.1 116 FYQVNFK|HN 0.083 . LdBPK_292350.1 120 NFKHNGK|QH 0.063 . LdBPK_292350.1 123 HNGKQHR|MA 0.200 . LdBPK_292350.1 135 FEPVSAR|LF 0.085 . LdBPK_292350.1 147 HDEPAQR|AD 0.088 . LdBPK_292350.1 158 LTVTLPK|SE 0.076 . LdBPK_292350.1 174 NGPLASK|TV 0.059 . LdBPK_292350.1 177 LASKTVK|GD 0.078 . LdBPK_292350.1 190 TFQTVPR|CP 0.087 . LdBPK_292350.1 223 VYATLGK|VG 0.061 . LdBPK_292350.1 226 TLGKVGR|AQ 0.112 . LdBPK_292350.1 243 ALEFFEK|FF 0.067 . LdBPK_292350.1 248 EKFFQCK|YP 0.075 . LdBPK_292350.1 253 CKYPLPK|LD 0.065 . LdBPK_292350.1 291 QSSVEAK|RG 0.081 . LdBPK_292350.1 292 SSVEAKR|GT 0.263 . LdBPK_292350.1 322 WEGLWLK|EG 0.059 . LdBPK_292350.1 387 DSISYNK|GM 0.070 . LdBPK_292350.1 402 QAFLGDK|WE 0.062 . LdBPK_292350.1 413 VAHYIGK|HQ 0.069 . LdBPK_292350.1 420 HQFGDTK|TV 0.072 . LdBPK_292350.1 433 ALEESSK|LP 0.059 . LdBPK_292350.1 456 PMIHVAR|QD 0.109 . LdBPK_292350.1 470 VTQEPCR|FA 0.135 . LdBPK_292350.1 477 FATASAK|SM 0.076 . LdBPK_292350.1 480 ASAKSMR|TW 0.125 . LdBPK_292350.1 497 IDPAAGR|AT 0.084 . LdBPK_292350.1 503 RATPMLR|CD 0.088 . LdBPK_292350.1 518 LPAGIAK|GA 0.102 . LdBPK_292350.1 527 FANANPR|RT 0.093 . LdBPK_292350.1 528 ANANPRR|TG 0.115 . LdBPK_292350.1 533 RRTGFYR|CR 0.095 . LdBPK_292350.1 535 TGFYRCR|YD 0.121 . LdBPK_292350.1 556 QLSPADR|RS 0.081 . LdBPK_292350.1 557 LSPADRR|SL 0.159 . LdBPK_292350.1 568 DTLAAIR|MG 0.070 . LdBPK_292350.1 576 GYDDIPR|LA 0.083 . LdBPK_292350.1 579 DIPRLAR|IA 0.274 . LdBPK_292350.1 582 RLARIAK|AV 0.450 . LdBPK_292350.1 589 AVSAFEK|DI 0.092 . LdBPK_292350.1 595 KDIYVLR|EY 0.104 . LdBPK_292350.1 606 TMGTFLR|SF 0.170 . LdBPK_292350.1 615 DDASLTK|SL 0.100 . LdBPK_292350.1 619 LTKSLTK|EL 0.064 . LdBPK_292350.1 645 DDSASLR|RN 0.091 . LdBPK_292350.1 646 DSASLRR|NF 0.097 . LdBPK_292350.1 698 TLSSCLR|AW 0.096 . LdBPK_292350.1 702 CLRAWVR|MA 0.115 . LdBPK_292350.1 712 PADLPAR|NA 0.086 . LdBPK_292350.1 719 NAQLYAK|LQ 0.067 . LdBPK_292350.1 731 GNEELCR|SL 0.130 . LdBPK_292350.1 751 FALDIMK|KC 0.055 . LdBPK_292350.1 752 ALDIMKK|CI 0.096 . LdBPK_292350.1 760 IENDGVR|SQ 0.124 . LdBPK_292350.1 803 WGGGQFR|IQ 0.096 . LdBPK_292350.1 837 HPLPNAR|LA 0.103 . LdBPK_292350.1 842 ARLAIGR|AA 0.121 . LdBPK_292350.1 848 RAAEELR|IR 0.086 . LdBPK_292350.1 850 AEELRIR|SW 0.095 . LdBPK_292350.1 855 IRSWLNK|KW 0.103 . LdBPK_292350.1 856 RSWLNKK|WK 0.086 . LdBPK_292350.1 858 WLNKKWK|AS 0.080 . LdBPK_292350.1 867 LPHVFCR|H- 0.172 . ____________________________^_________________

  • Fasta :-

    >LdBPK_292350.1 ATGTCGATGACAAAGAGCGTCAAACTGGAGAACCCGTATGTGCCCTCCGGGTATGACCTG CGCGTTGCGGTGGATCTTTCCACGTGGAGCTACGCAGCGGTGGAAACGGTGCACCTGCAG CGCTGTCCTGCCTTCCCTGACTGCGACACGATCCAGCTGCATGCAGCCCCGTCGATCGAG GTGACGTCAGTGAAAGGCGCCACTCTGGTACGGCGCGACAACACGGCGCACACGCTTGTG CTGAAGCTGGACGCGGAGACAATGGCGTTGGCAGATCCGACGTTGCAGTTTGAGTTCACG CATGTAATCCAAAAGGAGCTGCGCGGCTTCTACCAGGTGAACTTCAAGCATAACGGAAAG CAGCACCGCATGGCCTCCACGCACTTCGAGCCCGTGTCAGCGCGACTCTTCTATATTTGC CACGACGAGCCGGCGCAGCGCGCGGATTTCACGCTGACCGTGACGCTGCCAAAGTCGGAG GAGCACTACGTCGTCCTTTCTAACGGCCCTCTGGCGTCGAAGACTGTGAAAGGGGACACC GTGGTGCACACCTTCCAAACAGTGCCCAGGTGCCCGCCGTACCTGACAGCCTGTGTCGTC GGTGAGCTGGAGCACATCAGCACCGTCGTCAACGGCATCCCGGTCAGCGTGTACGCGACG CTGGGCAAGGTGGGACGGGCGCAGTTTGCCCTCAGCACCACCGTGTTTGCTCTTGAGTTC TTTGAGAAGTTCTTCCAGTGCAAGTACCCGCTACCAAAGCTGGACGTCGTTGCCATTCCC GACTTCCCGATCGGTGGGATGGAGAACTGGGGCTGCATCACGTGCGCTGAGGCGATACTG GTGGACCCGCAGCAGTCGAGCGTGGAGGCGAAGCGCGGCACGTCGAACCTGGTATGCCAC GAAGTCTCGCACAACTGGTTTGGTAACCTTGTTGCCATCAACTGGTGGGAGGGTCTGTGG CTCAAGGAGGGCTTTGCGTCGTGGTGCGGCTACCACGCGACGCACGCGTACGCGCCACAG TGGAACGCTCTGGACGCTGCGGCGCTGCAGGTGGTGTCGGCGCTGAACGACGACATATAC GAGCACAGTCACCCAGTTGAGGTGCCCATCCACGATCCTGGAGATATTACCCAGATCTTC GACAGCATCAGCTACAACAAGGGCATGGGCCTGGTTTTCATGTTGCAGGCGTTCCTTGGC GATAAGTGGGAATCTGCCGTCGCACACTACATCGGAAAGCACCAGTTCGGGGACACCAAA ACGGTGCAACTCTGGGAGGCGCTCGAGGAGTCGTCGAAGCTGCCCATCACCGAGGCCCTC ACCAGCTTCACCACGCAGATGGGCTACCCAATGATCCACGTGGCCAGACAGGACGAGAAC ACCATCGTGGTGACGCAAGAACCATGCCGCTTCGCCACGGCGTCGGCGAAGAGTATGCGG ACGTGGTGCGTGCCGCTTGTCGTGGAGGGCATCGACCCTGCCGCTGGGCGTGCGACACCG ATGCTGCGCTGCGACAACTCCATGGAGGTGACCCTGCCGGCCGGCATTGCGAAGGGGGCC TTTGCCAACGCCAACCCGCGCCGTACCGGCTTCTACCGCTGCCGGTACGACAACGCTATC TTCGATGCATGGCTCGCCAACTACAGCCAGCTTTCCCCTGCCGATCGCCGCTCCCTCTTT TCCGACACGCTGGCTGCGATTCGGATGGGCTACGATGACATTCCGCGGCTGGCGAGGATC GCGAAGGCCGTTTCGGCGTTCGAGAAGGATATCTATGTGCTGCGAGAGTACATGCAGACC ATGGGTACCTTCCTCCGCTCTTTCGACGATGCTTCTCTGACAAAGAGCCTGACCAAGGAG CTGCATGGTTTCCTCATCCCTGTCGCCGAGTCCTTTATAGGAGTCAGCCCGCAGGACGAC AGCGCGTCGCTGCGCCGCAACTTTTACCTCGACGCCAGTATCTCCACTCTGCTGAACAGC TGGGAGCCGGCGGAGGTCTCTGCGCACCCGGTGATCCAGTGGGCTCTGCAGCAGGCACAG GACTTCCTCTCCGGGGCAGGTTTCAACGCTGGCACGCTCAGCTCCTGCCTACGTGCCTGG GTTCGCATGGCCGACCCCGCCGACCTTCCAGCGCGCAACGCGCAGCTGTACGCGAAACTG CAGGAGGTGGACGGCAACGAGGAGCTGTGCCGTTCGCTGGTCCTGGCCATGACGAGCGGC GCCTCAGTTGACTTTGCGCTGGACATCATGAAAAAATGCATCGAGAACGACGGCGTCCGC AGCCAATACGGCGGGCAAGTCTTCTGGAGCCTCGCGTCGAATCCAGCGATCTCGGGCGCG GAGGTGTGGCAGGCCTTTCAGAACAACTTCGACGCAGTGAACGCGCAGTGGGGTGGCGGC CAGTTCCGTATCCAGGCTATTGTGGGCTTCCTGGGTGAGGCGCTCTCTGGCGATGCTGCG GCGGACGAGTTCGAGGCTTTCTTCGAGACGCATCCACTTCCTAATGCCCGCCTCGCCATC GGCCGCGCCGCTGAGGAGCTGCGCATTCGTTCGTGGCTGAACAAAAAGTGGAAGGCTTCC CTGCCTCACGTATTCTGCCGTCACTGA
  • Download Fasta

  • Fasta :-

    MSMTKSVKLENPYVPSGYDLRVAVDLSTWSYAAVETVHLQRCPAFPDCDTIQLHAAPSIE VTSVKGATLVRRDNTAHTLVLKLDAETMALADPTLQFEFTHVIQKELRGFYQVNFKHNGK QHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSEEHYVVLSNGPLASKTVKGDT VVHTFQTVPRCPPYLTACVVGELEHISTVVNGIPVSVYATLGKVGRAQFALSTTVFALEF FEKFFQCKYPLPKLDVVAIPDFPIGGMENWGCITCAEAILVDPQQSSVEAKRGTSNLVCH EVSHNWFGNLVAINWWEGLWLKEGFASWCGYHATHAYAPQWNALDAAALQVVSALNDDIY EHSHPVEVPIHDPGDITQIFDSISYNKGMGLVFMLQAFLGDKWESAVAHYIGKHQFGDTK TVQLWEALEESSKLPITEALTSFTTQMGYPMIHVARQDENTIVVTQEPCRFATASAKSMR TWCVPLVVEGIDPAAGRATPMLRCDNSMEVTLPAGIAKGAFANANPRRTGFYRCRYDNAI FDAWLANYSQLSPADRRSLFSDTLAAIRMGYDDIPRLARIAKAVSAFEKDIYVLREYMQT MGTFLRSFDDASLTKSLTKELHGFLIPVAESFIGVSPQDDSASLRRNFYLDASISTLLNS WEPAEVSAHPVIQWALQQAQDFLSGAGFNAGTLSSCLRAWVRMADPADLPARNAQLYAKL QEVDGNEELCRSLVLAMTSGASVDFALDIMKKCIENDGVRSQYGGQVFWSLASNPAISGA EVWQAFQNNFDAVNAQWGGGQFRIQAIVGFLGEALSGDAAADEFEAFFETHPLPNARLAI GRAAEELRIRSWLNKKWKASLPHVFCRH

  • title: Zn binding site
  • coordinates: H300,H304,E323
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_292350.163 SIEVTSVKGA0.991unspLdBPK_292350.1552 SYSQLSPADR0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India