LdBPK_292470.1 | aspartyl aminopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_292470.1OTHER0.9990770.0002330.000690
No Results

  • Fasta :-

    >LdBPK_292470.1 MATIMSEYVVQMAKEFVNFMNQAITPFHVVQTVAEMLKGAGYTQLHEEKAWPEITPGGKY YLMRNGTSIIAFSVGGKFDPMNGVKIVGAHTDSPNFLLKPRTKSTAADYQRVAVQCYGGG LWHSWFDRDLTVAGRVMISRERLEQKIIKIDKPIMRIPNLAIHLTSAKDREAFSPNKESH LIPIISTQIAAKIAECDDKDASNPNHCVSLMKAIASVAGCSADEIVDFDLSVIDTQPAVI GGIHDEFIFSPRLDNLISCYCAVKAIVEAGSLENDTMMRMVCLFDHEECGSSSSQGAAGS LVPDVIEHIVSNKTLRATLVANSFLLSVDGAHGCHPNYADKHENAHRPALHGGPVIKYNA NVRYATNGLTAAVVKDMAKKADIPIQEFVVRNDSPCGSTIGPILSSLSGIKTADIGNPMI SMHSIREMCGTVDVYYLTKLIESFFVNYQSPHE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_292470.1.fa Sequence name : LdBPK_292470 Sequence length : 453 VALUES OF COMPUTED PARAMETERS Coef20 : 4.202 CoefTot : 0.253 ChDiff : -8 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.394 1.453 0.286 0.458 MesoH : -0.404 0.709 -0.212 0.286 MuHd_075 : 4.710 2.797 1.374 0.954 MuHd_095 : 41.688 28.253 11.123 8.067 MuHd_100 : 38.446 24.260 10.609 6.872 MuHd_105 : 29.977 17.696 9.056 4.798 Hmax_075 : 6.400 9.200 0.223 3.650 Hmax_095 : 19.513 17.938 2.494 5.880 Hmax_100 : 19.700 18.200 3.005 5.560 Hmax_105 : 17.850 15.700 2.655 4.890 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7994 0.2006 DFMC : 0.8049 0.1951
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 453 LdBPK_292470.1 MATIMSEYVVQMAKEFVNFMNQAITPFHVVQTVAEMLKGAGYTQLHEEKAWPEITPGGKYYLMRNGTSIIAFSVGGKFDP 80 MNGVKIVGAHTDSPNFLLKPRTKSTAADYQRVAVQCYGGGLWHSWFDRDLTVAGRVMISRERLEQKIIKIDKPIMRIPNL 160 AIHLTSAKDREAFSPNKESHLIPIISTQIAAKIAECDDKDASNPNHCVSLMKAIASVAGCSADEIVDFDLSVIDTQPAVI 240 GGIHDEFIFSPRLDNLISCYCAVKAIVEAGSLENDTMMRMVCLFDHEECGSSSSQGAAGSLVPDVIEHIVSNKTLRATLV 320 ANSFLLSVDGAHGCHPNYADKHENAHRPALHGGPVIKYNANVRYATNGLTAAVVKDMAKKADIPIQEFVVRNDSPCGSTI 400 GPILSSLSGIKTADIGNPMISMHSIREMCGTVDVYYLTKLIESFFVNYQSPHE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_292470.1 14 YVVQMAK|EF 0.058 . LdBPK_292470.1 38 TVAEMLK|GA 0.084 . LdBPK_292470.1 49 TQLHEEK|AW 0.070 . LdBPK_292470.1 59 EITPGGK|YY 0.058 . LdBPK_292470.1 64 GKYYLMR|NG 0.109 . LdBPK_292470.1 77 AFSVGGK|FD 0.065 . LdBPK_292470.1 85 DPMNGVK|IV 0.096 . LdBPK_292470.1 99 SPNFLLK|PR 0.073 . LdBPK_292470.1 101 NFLLKPR|TK 0.096 . LdBPK_292470.1 103 LLKPRTK|ST 0.083 . LdBPK_292470.1 111 TAADYQR|VA 0.108 . LdBPK_292470.1 128 WHSWFDR|DL 0.196 . LdBPK_292470.1 135 DLTVAGR|VM 0.071 . LdBPK_292470.1 140 GRVMISR|ER 0.080 . LdBPK_292470.1 142 VMISRER|LE 0.070 . LdBPK_292470.1 146 RERLEQK|II 0.072 . LdBPK_292470.1 149 LEQKIIK|ID 0.067 . LdBPK_292470.1 152 KIIKIDK|PI 0.070 . LdBPK_292470.1 156 IDKPIMR|IP 0.091 . LdBPK_292470.1 168 IHLTSAK|DR 0.070 . LdBPK_292470.1 170 LTSAKDR|EA 0.131 . LdBPK_292470.1 177 EAFSPNK|ES 0.057 . LdBPK_292470.1 192 STQIAAK|IA 0.074 . LdBPK_292470.1 199 IAECDDK|DA 0.089 . LdBPK_292470.1 212 HCVSLMK|AI 0.070 . LdBPK_292470.1 252 EFIFSPR|LD 0.071 . LdBPK_292470.1 264 SCYCAVK|AI 0.065 . LdBPK_292470.1 279 ENDTMMR|MV 0.103 . LdBPK_292470.1 313 EHIVSNK|TL 0.069 . LdBPK_292470.1 316 VSNKTLR|AT 0.099 . LdBPK_292470.1 341 HPNYADK|HE 0.075 . LdBPK_292470.1 347 KHENAHR|PA 0.124 . LdBPK_292470.1 357 HGGPVIK|YN 0.077 . LdBPK_292470.1 363 KYNANVR|YA 0.143 . LdBPK_292470.1 375 LTAAVVK|DM 0.074 . LdBPK_292470.1 379 VVKDMAK|KA 0.070 . LdBPK_292470.1 380 VKDMAKK|AD 0.106 . LdBPK_292470.1 391 IQEFVVR|ND 0.122 . LdBPK_292470.1 411 SSLSGIK|TA 0.076 . LdBPK_292470.1 426 ISMHSIR|EM 0.114 . LdBPK_292470.1 439 DVYYLTK|LI 0.063 . ____________________________^_________________

  • Fasta :-

    >LdBPK_292470.1 ATGGCGACCATTATGTCTGAGTACGTTGTGCAGATGGCAAAGGAATTTGTCAACTTTATG AACCAAGCCATCACTCCGTTTCACGTTGTGCAAACAGTTGCCGAAATGCTGAAGGGCGCC GGGTACACGCAGCTTCATGAGGAAAAGGCTTGGCCAGAAATAACTCCCGGGGGCAAGTAC TACTTGATGCGCAATGGCACCAGCATCATTGCGTTTTCAGTCGGAGGAAAATTTGACCCG ATGAACGGTGTAAAGATTGTTGGCGCGCACACGGATTCCCCCAATTTTCTGCTGAAGCCA CGCACAAAATCAACCGCTGCTGATTACCAGCGCGTTGCAGTGCAGTGCTACGGTGGCGGC CTGTGGCACTCGTGGTTTGATCGTGATTTGACGGTTGCCGGCCGCGTTATGATTTCACGA GAACGCCTGGAGCAGAAAATCATCAAGATCGACAAACCAATAATGCGTATCCCAAATCTC GCTATTCATTTGACCTCTGCCAAGGATCGCGAAGCGTTTTCGCCCAACAAGGAGTCTCAT CTGATCCCTATTATATCTACGCAGATAGCCGCGAAGATTGCGGAGTGTGACGACAAGGAC GCGTCGAATCCGAATCACTGTGTTTCCTTGATGAAGGCGATCGCGAGCGTTGCTGGATGC AGCGCGGATGAAATTGTCGATTTCGATTTGAGTGTGATTGACACCCAACCAGCAGTGATT GGAGGTATTCATGATGAGTTTATCTTCTCGCCGCGCCTCGACAATCTGATCTCGTGCTAT TGTGCTGTGAAGGCGATTGTCGAGGCTGGCTCTTTGGAAAATGATACGATGATGCGGATG GTGTGTTTGTTCGATCACGAAGAGTGTGGTTCCAGCTCATCCCAAGGTGCTGCCGGCTCA CTGGTTCCTGATGTTATTGAGCACATTGTAAGCAACAAAACCCTTCGTGCAACGTTGGTC GCCAATTCGTTTCTTCTCTCTGTCGATGGCGCACATGGATGCCACCCGAACTACGCTGAC AAACACGAAAATGCTCACCGACCAGCTCTCCATGGAGGACCTGTTATCAAATACAATGCA AACGTCCGTTATGCGACCAACGGATTGACAGCAGCCGTAGTGAAGGATATGGCGAAGAAG GCTGACATACCCATCCAAGAGTTTGTGGTGCGAAATGACTCTCCCTGCGGATCCACCATC GGGCCCATTCTGTCTTCTCTGTCCGGTATAAAAACTGCTGATATTGGCAACCCCATGATC AGCATGCACAGTATCCGGGAGATGTGTGGTACTGTTGATGTCTACTACCTGACGAAGCTG ATTGAATCCTTTTTTGTCAATTACCAAAGCCCACATGAGTAG
  • Download Fasta

  • Fasta :-

    MATIMSEYVVQMAKEFVNFMNQAITPFHVVQTVAEMLKGAGYTQLHEEKAWPEITPGGKY YLMRNGTSIIAFSVGGKFDPMNGVKIVGAHTDSPNFLLKPRTKSTAADYQRVAVQCYGGG LWHSWFDRDLTVAGRVMISRERLEQKIIKIDKPIMRIPNLAIHLTSAKDREAFSPNKESH LIPIISTQIAAKIAECDDKDASNPNHCVSLMKAIASVAGCSADEIVDFDLSVIDTQPAVI GGIHDEFIFSPRLDNLISCYCAVKAIVEAGSLENDTMMRMVCLFDHEECGSSSSQGAAGS LVPDVIEHIVSNKTLRATLVANSFLLSVDGAHGCHPNYADKHENAHRPALHGGPVIKYNA NVRYATNGLTAAVVKDMAKKADIPIQEFVVRNDSPCGSTIGPILSSLSGIKTADIGNPMI SMHSIREMCGTVDVYYLTKLIESFFVNYQSPHE

  • title: metal binding site
  • coordinates: H90,D254,E287,E288,D329,H423
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_292470.1424 SISMHSIREM0.994unspLdBPK_292470.1424 SISMHSIREM0.994unspLdBPK_292470.1424 SISMHSIREM0.994unspLdBPK_292470.1166 SIHLTSAKDR0.995unspLdBPK_292470.1394 SVRNDSPCGS0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India