LdBPK_300050.1 | MATH domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_300050.1OTHER0.9998830.0000260.000091
No Results

  • Fasta :-

    >LdBPK_300050.1 MHRLSSLSEGDLCFYQSTLYQLIQDAPIEAKPGREMMRTLRKELVRSMEQEECPEYCAAL ADLYKTVTDTLISAAHRSAPHELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSN SDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDEKGKQYHTLGPFPPPRLTVRA PTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGP LPTAASIDFLNTLPDHLKQSLGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKK IANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAKQKKVKFTVPPDSMSIKGDMG FVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLNPDQGFVTADDDSITIEVGIV LVEPLKTPTAREKAPVAKEKKNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEK TRKDITQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQERQRELDKIKQAQEQTAELK SRLQSLKKENAELIQSKQDATQAAKEAKKNSERIAQELKFVLDRVQSTQQKLHTQEKKLA AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_300050.1.fa Sequence name : LdBPK_300050 Sequence length : 762 VALUES OF COMPUTED PARAMETERS Coef20 : 3.914 CoefTot : 0.476 ChDiff : -16 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.729 1.159 0.063 0.429 MesoH : -0.518 0.205 -0.447 0.177 MuHd_075 : 9.854 7.433 4.380 2.456 MuHd_095 : 8.983 6.342 1.514 1.554 MuHd_100 : 9.457 9.688 2.340 3.243 MuHd_105 : 17.737 13.492 4.645 4.580 Hmax_075 : 10.033 4.783 0.247 2.590 Hmax_095 : 5.400 3.100 -1.056 1.890 Hmax_100 : 5.400 4.100 0.029 2.530 Hmax_105 : 5.300 7.300 0.173 2.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9110 0.0890 DFMC : 0.8887 0.1113
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 762 LdBPK_300050.1 MHRLSSLSEGDLCFYQSTLYQLIQDAPIEAKPGREMMRTLRKELVRSMEQEECPEYCAALADLYKTVTDTLISAAHRSAP 80 HELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSNSDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDE 160 KGKQYHTLGPFPPPRLTVRAPTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI 240 DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGPLPTAASIDFLNTLPDHLKQS 320 LGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKKIANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAK 400 QKKVKFTVPPDSMSIKGDMGFVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV 480 VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLNPDQGFVTADDDSITIEVGIVLVEPLKTPTAREKAPVAKEK 560 KNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEKTRKDITQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQ 640 ERQRELDKIKQAQEQTAELKSRLQSLKKENAELIQSKQDATQAAKEAKKNSERIAQELKFVLDRVQSTQQKLHTQEKKLA 720 AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM 800 ................................................................................ 80 ................................................................P............... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .......................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_300050.1 3 ----MHR|LS 0.096 . LdBPK_300050.1 31 DAPIEAK|PG 0.064 . LdBPK_300050.1 34 IEAKPGR|EM 0.106 . LdBPK_300050.1 38 PGREMMR|TL 0.110 . LdBPK_300050.1 41 EMMRTLR|KE 0.112 . LdBPK_300050.1 42 MMRTLRK|EL 0.090 . LdBPK_300050.1 46 LRKELVR|SM 0.202 . LdBPK_300050.1 65 ALADLYK|TV 0.080 . LdBPK_300050.1 77 LISAAHR|SA 0.179 . LdBPK_300050.1 86 PHELINR|TT 0.084 . LdBPK_300050.1 92 RTTSDCR|IV 0.100 . LdBPK_300050.1 124 DSNSDIK|ST 0.086 . LdBPK_300050.1 128 DIKSTAK|DA 0.104 . LdBPK_300050.1 133 AKDAEQK|QR 0.061 . LdBPK_300050.1 135 DAEQKQR|KR 0.086 . LdBPK_300050.1 136 AEQKQRK|RE 0.090 . LdBPK_300050.1 137 EQKQRKR|EE 0.123 . LdBPK_300050.1 141 RKREETK|RK 0.075 . LdBPK_300050.1 142 KREETKR|KR 0.227 . LdBPK_300050.1 143 REETKRK|RR 0.101 . LdBPK_300050.1 144 EETKRKR|RE 0.120 . LdBPK_300050.1 145 ETKRKRR|EE 0.533 *ProP* LdBPK_300050.1 153 EEDMLMK|ER 0.052 . LdBPK_300050.1 155 DMLMKER|KV 0.113 . LdBPK_300050.1 156 MLMKERK|VT 0.143 . LdBPK_300050.1 161 RKVTDEK|GK 0.064 . LdBPK_300050.1 163 VTDEKGK|QY 0.072 . LdBPK_300050.1 175 GPFPPPR|LT 0.099 . LdBPK_300050.1 179 PPRLTVR|AP 0.095 . LdBPK_300050.1 188 TNTFPSR|KA 0.128 . LdBPK_300050.1 189 NTFPSRK|AL 0.087 . LdBPK_300050.1 194 RKALQQR|TI 0.128 . LdBPK_300050.1 220 NQLISSR|ST 0.187 . LdBPK_300050.1 244 LSIDSLK|KV 0.090 . LdBPK_300050.1 245 SIDSLKK|VG 0.080 . LdBPK_300050.1 251 KVGESAK|AK 0.060 . LdBPK_300050.1 253 GESAKAK|LR 0.075 . LdBPK_300050.1 255 SAKAKLR|PS 0.104 . LdBPK_300050.1 269 FVSQIVK|TA 0.059 . LdBPK_300050.1 273 IVKTAVR|LG 0.069 . LdBPK_300050.1 278 VRLGCEK|AC 0.060 . LdBPK_300050.1 285 ACVLMEK|QK 0.071 . LdBPK_300050.1 287 VLMEKQK|II 0.085 . LdBPK_300050.1 318 TLPDHLK|QS 0.063 . LdBPK_300050.1 331 LGLPEEK|PP 0.053 . LdBPK_300050.1 340 VEDMWER|MV 0.134 . LdBPK_300050.1 354 SVLTNLR|LK 0.059 . LdBPK_300050.1 356 LTNLRLK|PL 0.064 . LdBPK_300050.1 359 LRLKPLK|KI 0.070 . LdBPK_300050.1 360 RLKPLKK|IA 0.093 . LdBPK_300050.1 377 DTNSTEK|FC 0.069 . LdBPK_300050.1 389 VFAAFPR|ER 0.083 . LdBPK_300050.1 391 AAFPRER|IR 0.071 . LdBPK_300050.1 393 FPRERIR|AK 0.091 . LdBPK_300050.1 395 RERIRAK|FS 0.096 . LdBPK_300050.1 398 IRAKFSR|AK 0.171 . LdBPK_300050.1 400 AKFSRAK|QK 0.069 . LdBPK_300050.1 402 FSRAKQK|KV 0.085 . LdBPK_300050.1 403 SRAKQKK|VK 0.200 . LdBPK_300050.1 405 AKQKKVK|FT 0.083 . LdBPK_300050.1 416 PDSMSIK|GD 0.079 . LdBPK_300050.1 434 NISMLTK|ES 0.071 . LdBPK_300050.1 438 LTKESER|HY 0.105 . LdBPK_300050.1 450 FHFANLK|WS 0.055 . LdBPK_300050.1 459 LLCMTNK|ES 0.059 . LdBPK_300050.1 475 TGSVHCK|FL 0.110 . LdBPK_300050.1 483 LITVVNK|AN 0.059 . LdBPK_300050.1 514 GFNNVIK|FA 0.092 . LdBPK_300050.1 546 VLVEPLK|TP 0.058 . LdBPK_300050.1 551 LKTPTAR|EK 0.103 . LdBPK_300050.1 553 TPTAREK|AP 0.068 . LdBPK_300050.1 558 EKAPVAK|EK 0.075 . LdBPK_300050.1 560 APVAKEK|KN 0.082 . LdBPK_300050.1 561 PVAKEKK|NE 0.083 . LdBPK_300050.1 565 EKKNEPR|VD 0.126 . LdBPK_300050.1 579 QLLADEK|VE 0.052 . LdBPK_300050.1 584 EKVEQTR|KK 0.099 . LdBPK_300050.1 585 KVEQTRK|KL 0.078 . LdBPK_300050.1 586 VEQTRKK|LK 0.105 . LdBPK_300050.1 588 QTRKKLK|QE 0.065 . LdBPK_300050.1 593 LKQEISK|TI 0.078 . LdBPK_300050.1 596 EISKTIR|EE 0.107 . LdBPK_300050.1 600 TIREEEK|TR 0.064 . LdBPK_300050.1 602 REEEKTR|KD 0.095 . LdBPK_300050.1 603 EEEKTRK|DI 0.099 . LdBPK_300050.1 608 RKDITQR|AS 0.092 . LdBPK_300050.1 611 ITQRASK|AY 0.130 . LdBPK_300050.1 619 YHDLCDR|LR 0.062 . LdBPK_300050.1 621 DLCDRLR|QE 0.073 . LdBPK_300050.1 625 RLRQETK|RT 0.069 . LdBPK_300050.1 626 LRQETKR|TQ 0.201 . LdBPK_300050.1 629 ETKRTQK|EV 0.171 . LdBPK_300050.1 634 QKEVADR|ER 0.082 . LdBPK_300050.1 636 EVADRER|KE 0.097 . LdBPK_300050.1 637 VADRERK|EE 0.131 . LdBPK_300050.1 642 RKEEQER|QR 0.072 . LdBPK_300050.1 644 EEQERQR|EL 0.113 . LdBPK_300050.1 648 RQRELDK|IK 0.074 . LdBPK_300050.1 650 RELDKIK|QA 0.074 . LdBPK_300050.1 660 EQTAELK|SR 0.071 . LdBPK_300050.1 662 TAELKSR|LQ 0.104 . LdBPK_300050.1 667 SRLQSLK|KE 0.072 . LdBPK_300050.1 668 RLQSLKK|EN 0.091 . LdBPK_300050.1 677 AELIQSK|QD 0.063 . LdBPK_300050.1 685 DATQAAK|EA 0.061 . LdBPK_300050.1 688 QAAKEAK|KN 0.086 . LdBPK_300050.1 689 AAKEAKK|NS 0.103 . LdBPK_300050.1 693 AKKNSER|IA 0.097 . LdBPK_300050.1 699 RIAQELK|FV 0.076 . LdBPK_300050.1 704 LKFVLDR|VQ 0.103 . LdBPK_300050.1 711 VQSTQQK|LH 0.067 . LdBPK_300050.1 717 KLHTQEK|KL 0.069 . LdBPK_300050.1 718 LHTQEKK|LA 0.107 . LdBPK_300050.1 723 KKLAAAK|SR 0.078 . LdBPK_300050.1 725 LAAAKSR|YE 0.116 . LdBPK_300050.1 753 MSEDLTR|FI 0.113 . ____________________________^_________________

  • Fasta :-

    >LdBPK_300050.1 ATGCACCGTCTTTCCTCGTTGTCCGAGGGGGATCTGTGCTTCTACCAGTCCACGTTGTAC CAGCTGATCCAGGATGCTCCGATCGAGGCGAAGCCCGGCCGTGAAATGATGCGCACACTC CGTAAGGAGCTGGTACGATCGATGGAGCAGGAGGAATGCCCTGAATATTGCGCAGCCTTG GCGGACCTGTACAAAACCGTGACAGACACATTGATATCCGCTGCTCACCGCAGTGCCCCG CACGAGCTCATCAACCGCACCACGAGCGACTGCCGCATTGTCACGGACGAGGACGAGTAT CAGTTCCACCAGGAGGAGGGCTTTTTCGACGACGAGGACGAGGATGAAATGGACTCCAAC AGCGACATCAAGTCCACCGCCAAGGACGCAGAGCAGAAGCAGCGCAAGAGGGAGGAGACG AAGCGCAAGCGTCGCGAGGAGGAGGACATGCTCATGAAGGAGCGCAAGGTCACGGACGAG AAGGGGAAGCAGTACCACACCCTCGGCCCCTTTCCGCCGCCGCGGCTCACCGTGCGTGCC CCCACCAATACCTTTCCCAGCCGCAAGGCACTGCAGCAGCGCACCATCATCGAGACCCCC TCTTCCACGTCTTCGTCGTCGGACGATGATGAAGCGATCAACCAGCTCATTAGCAGCCGC TCCACCGAAGGCGGGGAGGCCGTGAACCACCTGACTGACTTTCTTCAGCCCCTGTCTATC GACTCGCTCAAGAAAGTGGGCGAGAGCGCCAAGGCGAAGCTGCGGCCCTCCTCAACACAC GACGAATTCGTGTCCCAAATCGTGAAGACGGCGGTGCGGCTGGGCTGCGAGAAGGCGTGC GTCCTCATGGAGAAGCAGAAGATCATCGAAGATATGACGTCACACGTGCAAACGGGCCCG CTGCCTACGGCCGCCAGCATCGACTTCTTGAACACGCTGCCGGACCACCTGAAGCAGTCG CTGGGTAGTGTTCTGGGCCTTCCGGAGGAGAAGCCCCCGGTGGAGGACATGTGGGAGCGC ATGGTGGCCATGGGCTTCCTCTCCGTGCTAACGAATCTGCGCTTGAAACCGCTCAAGAAA ATTGCGAACGAGCTCAGCATCGTGCTGCCGGACACCAACTCAACGGAGAAGTTCTGCGAG TTTATCGTCTTTGCTGCCTTTCCACGCGAGCGCATTCGCGCGAAATTCTCCCGCGCCAAG CAGAAGAAGGTGAAGTTCACGGTGCCGCCGGACAGCATGAGCATCAAGGGCGACATGGGG TTCGTGACGTTCCACGTCAACAACATATCGATGCTGACAAAGGAATCGGAGCGTCATTAC TCGCCGGAGTTCCACTTTGCCAATCTCAAGTGGAGCCTGCTGTGCATGACGAACAAGGAG TCGCTTGCGCTGTACCTCTGCCAGACCGGCAGCGTGCACTGCAAGTTCCTCATCACGGTG GTGAACAAGGCAAACCCTGATGACTCCATCTGTAATGAGGGCACGCAGAGCTTTTCCGCC ATGTCGCAGGAAAACGACTGGGGGTTCAACAACGTCATCAAGTTTGCGGAGCTGCTGAAT CCTGACCAGGGCTTTGTCACTGCCGATGACGACAGCATCACCATCGAGGTTGGCATCGTG TTGGTGGAGCCTCTCAAGACACCCACTGCACGCGAGAAAGCGCCAGTCGCCAAGGAGAAG AAGAACGAACCCCGCGTGGACGAGGCGGCGATGCTGCAGCTGCTGGCTGACGAGAAGGTA GAGCAGACGCGCAAGAAGCTGAAACAGGAGATCAGCAAGACCATCCGGGAGGAGGAGAAG ACACGCAAGGACATCACACAGAGGGCCAGCAAGGCGTACCACGACTTGTGCGATCGCCTT CGCCAGGAGACGAAGCGCACCCAAAAGGAGGTGGCGGACCGCGAGCGCAAGGAGGAGCAG GAGCGGCAGCGGGAGCTCGACAAGATCAAGCAGGCGCAGGAGCAGACGGCGGAGCTCAAG AGTCGATTACAGTCGCTCAAGAAGGAGAATGCGGAGCTGATACAGTCGAAGCAGGATGCC ACACAGGCCGCCAAGGAGGCAAAAAAGAACAGCGAGCGCATCGCCCAGGAGCTGAAGTTT GTCTTGGACAGGGTTCAATCGACCCAGCAGAAGCTTCACACACAGGAAAAGAAGCTTGCA GCGGCCAAGAGTCGCTACGAGAGCATCCTGGCCGAGGAGCCCGACACCCCCAGTCCGTCC GATGATGAGAACGACCTCATGAGCGAGGACCTCACGCGCTTCATCAACCTAATGACGGAC GATATGTAA
  • Download Fasta

  • Fasta :-

    MHRLSSLSEGDLCFYQSTLYQLIQDAPIEAKPGREMMRTLRKELVRSMEQEECPEYCAAL ADLYKTVTDTLISAAHRSAPHELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSN SDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDEKGKQYHTLGPFPPPRLTVRA PTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGP LPTAASIDFLNTLPDHLKQSLGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKK IANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAKQKKVKFTVPPDSMSIKGDMG FVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLNPDQGFVTADDDSITIEVGIV LVEPLKTPTAREKAPVAKEKKNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEK TRKDITQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQERQRELDKIKQAQEQTAELK SRLQSLKKENAELIQSKQDATQAAKEAKKNSERIAQELKFVLDRVQSTQQKLHTQEKKLA AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM

  • title: putative substrate binding site
  • coordinates: Y465,D506,W507,G508
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_300050.189 SNRTTSDCRI0.995unspLdBPK_300050.189 SNRTTSDCRI0.995unspLdBPK_300050.189 SNRTTSDCRI0.995unspLdBPK_300050.1119 SDEMDSNSDI0.991unspLdBPK_300050.1140 TKREETKRKR0.992unspLdBPK_300050.1204 SPSSTSSSSD0.993unspLdBPK_300050.1205 SSSTSSSSDD0.997unspLdBPK_300050.1206 SSTSSSSDDD0.997unspLdBPK_300050.1207 STSSSSDDDE0.997unspLdBPK_300050.1221 SISSRSTEGG0.993unspLdBPK_300050.1257 SKLRPSSTHD0.99unspLdBPK_300050.1258 SLRPSSTHDE0.998unspLdBPK_300050.1441 SERHYSPEFH0.997unspLdBPK_300050.1738 SPDTPSPSDD0.997unspLdBPK_300050.1740 STPSPSDDEN0.994unspLdBPK_300050.16 SHRLSSLSEG0.997unspLdBPK_300050.18 SLSSLSEGDL0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India