LdBPK_310410.1 | Calpain-like protein 2

_IDPredictionOTHERSPmTPCS_Position
LdBPK_310410.1OTHER0.9999260.0000640.000010
No Results

  • Fasta :-

    >LdBPK_310410.1 MPAATAEPQPFEFPPGYVMPLPTRPSKMDEDTLHPVRVPTPLPDLLPRSMKDIQKMRNLQ SDGDTAKKYVPPRRDLPPPYVNDDECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPS VEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFTFGAKSDLQPGEKVDMYVMST SELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIADDLMVMAQA IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPE EQLKEVRLFRRDILPSQVTHGSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIER ALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDIRRMWVALLEKTYAKVHGSYA NIASGDPLEPLSEFTGFPVTRYESFWEDAQGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRVRNPWGNGSEWTGA WSKDDKRWSKYPSVRNACYRHGGSPTDADRTFWVEWSDALKIFSGGGCCHLRTPWFDYRA RGEFAQGIPTVSFEVNVSAPTEAYITLSQEDERDDPSLEYHALLLSVFRHSGKKEKLDAT SNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFVIPRIHDPSVTKPYVMGLLCDTYVGN GIKVEFKRVDRNCRVFANMPSFVQVGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFG ILEE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_310410.1.fa Sequence name : LdBPK_310410 Sequence length : 784 VALUES OF COMPUTED PARAMETERS Coef20 : 2.681 CoefTot : 0.170 ChDiff : -36 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.176 1.076 0.033 0.612 MesoH : -0.550 0.248 -0.400 0.237 MuHd_075 : 13.104 3.339 3.006 0.150 MuHd_095 : 6.132 6.194 1.787 1.737 MuHd_100 : 3.188 7.981 1.793 2.045 MuHd_105 : 6.114 7.646 1.811 2.226 Hmax_075 : 11.083 4.200 -0.181 3.180 Hmax_095 : 7.175 3.938 -0.050 3.640 Hmax_100 : 5.600 4.000 -0.778 3.060 Hmax_105 : 8.167 4.300 0.331 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9870 0.0130 DFMC : 0.9677 0.0323
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 784 LdBPK_310410.1 MPAATAEPQPFEFPPGYVMPLPTRPSKMDEDTLHPVRVPTPLPDLLPRSMKDIQKMRNLQSDGDTAKKYVPPRRDLPPPY 80 VNDDECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPSVEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFT 160 FGAKSDLQPGEKVDMYVMSTSELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIADDLMVMAQA 240 IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPEEQLKEVRLFRRDILPSQVTH 320 GSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIERALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDI 400 RRMWVALLEKTYAKVHGSYANIASGDPLEPLSEFTGFPVTRYESFWEDAQGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE 480 AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRVRNPWGNGSEWTGAWSKDDKRWSKYPSVRNACYR 560 HGGSPTDADRTFWVEWSDALKIFSGGGCCHLRTPWFDYRARGEFAQGIPTVSFEVNVSAPTEAYITLSQEDERDDPSLEY 640 HALLLSVFRHSGKKEKLDATSNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFVIPRIHDPSVTKPYVMGLLCDTYVGN 720 GIKVEFKRVDRNCRVFANMPSFVQVGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFGILEE 800 ................................................................................ 80 ............................P................................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_310410.1 24 VMPLPTR|PS 0.080 . LdBPK_310410.1 27 LPTRPSK|MD 0.169 . LdBPK_310410.1 37 DTLHPVR|VP 0.066 . LdBPK_310410.1 48 LPDLLPR|SM 0.172 . LdBPK_310410.1 51 LLPRSMK|DI 0.234 . LdBPK_310410.1 55 SMKDIQK|MR 0.059 . LdBPK_310410.1 57 KDIQKMR|NL 0.104 . LdBPK_310410.1 67 SDGDTAK|KY 0.067 . LdBPK_310410.1 68 DGDTAKK|YV 0.108 . LdBPK_310410.1 73 KKYVPPR|RD 0.078 . LdBPK_310410.1 74 KYVPPRR|DL 0.146 . LdBPK_310410.1 92 CDEFEDK|TI 0.068 . LdBPK_310410.1 104 ILNMSEK|DR 0.080 . LdBPK_310410.1 106 NMSEKDR|TK 0.113 . LdBPK_310410.1 108 SEKDRTK|RM 0.062 . LdBPK_310410.1 109 EKDRTKR|MG 0.604 *ProP* LdBPK_310410.1 136 ENGLLFK|VV 0.077 . LdBPK_310410.1 152 YYNDTDK|YE 0.072 . LdBPK_310410.1 158 KYEMHVK|FT 0.077 . LdBPK_310410.1 164 KFTFGAK|SD 0.069 . LdBPK_310410.1 172 DLQPGEK|VD 0.059 . LdBPK_310410.1 196 FPGETTK|LV 0.080 . LdBPK_310410.1 201 TKLVAGK|IN 0.074 . LdBPK_310410.1 206 GKINGFK|CS 0.065 . LdBPK_310410.1 210 GFKCSAK|AV 0.075 . LdBPK_310410.1 218 VPLNDDK|RD 0.055 . LdBPK_310410.1 219 PLNDDKR|DI 0.295 . LdBPK_310410.1 229 YGEVNDR|IA 0.110 . LdBPK_310410.1 244 AQAIGVR|ED 0.081 . LdBPK_310410.1 252 DDLTEEK|VL 0.056 . LdBPK_310410.1 262 YCEENEK|PY 0.056 . LdBPK_310410.1 270 YIDCDFR|PC 0.078 . LdBPK_310410.1 278 CDYSLYR|AD 0.070 . LdBPK_310410.1 287 VDTYLPR|FI 0.105 . LdBPK_310410.1 293 RFIPWHR|PS 0.089 . LdBPK_310410.1 304 IPEEQLK|EV 0.072 . LdBPK_310410.1 307 EQLKEVR|LF 0.068 . LdBPK_310410.1 310 KEVRLFR|RD 0.120 . LdBPK_310410.1 311 EVRLFRR|DI 0.262 . LdBPK_310410.1 342 TDASGDR|LH 0.082 . LdBPK_310410.1 348 RLHDLFR|HP 0.088 . LdBPK_310410.1 357 VSAANGK|IE 0.066 . LdBPK_310410.1 360 ANGKIER|AL 0.134 . LdBPK_310410.1 388 DFLPATR|DG 0.065 . LdBPK_310410.1 395 DGPEFAR|CA 0.123 . LdBPK_310410.1 401 RCAVDIR|RM 0.083 . LdBPK_310410.1 402 CAVDIRR|MW 0.129 . LdBPK_310410.1 410 WVALLEK|TY 0.059 . LdBPK_310410.1 414 LEKTYAK|VH 0.064 . LdBPK_310410.1 441 TGFPVTR|YE 0.141 . LdBPK_310410.1 465 EMLSYNR|MG 0.066 . LdBPK_310410.1 500 LEATYEK|MG 0.054 . LdBPK_310410.1 523 FEDLDLR|LL 0.072 . LdBPK_310410.1 526 LDLRLLR|VR 0.170 . LdBPK_310410.1 528 LRLLRVR|NP 0.080 . LdBPK_310410.1 543 WTGAWSK|DD 0.061 . LdBPK_310410.1 546 AWSKDDK|RW 0.076 . LdBPK_310410.1 547 WSKDDKR|WS 0.107 . LdBPK_310410.1 550 DDKRWSK|YP 0.121 . LdBPK_310410.1 555 SKYPSVR|NA 0.113 . LdBPK_310410.1 560 VRNACYR|HG 0.118 . LdBPK_310410.1 570 SPTDADR|TF 0.080 . LdBPK_310410.1 581 EWSDALK|IF 0.081 . LdBPK_310410.1 592 GGCCHLR|TP 0.074 . LdBPK_310410.1 599 TPWFDYR|AR 0.104 . LdBPK_310410.1 601 WFDYRAR|GE 0.099 . LdBPK_310410.1 633 LSQEDER|DD 0.092 . LdBPK_310410.1 649 LLLSVFR|HS 0.118 . LdBPK_310410.1 653 VFRHSGK|KE 0.057 . LdBPK_310410.1 654 FRHSGKK|EK 0.098 . LdBPK_310410.1 656 HSGKKEK|LD 0.067 . LdBPK_310410.1 667 SNSLVEK|PD 0.078 . LdBPK_310410.1 670 LVEKPDR|QL 0.078 . LdBPK_310410.1 673 KPDRQLK|FN 0.126 . LdBPK_310410.1 678 LKFNFSR|DV 0.169 . LdBPK_310410.1 683 SRDVAMK|YT 0.092 . LdBPK_310410.1 698 PYFVIPR|IH 0.092 . LdBPK_310410.1 706 HDPSVTK|PY 0.062 . LdBPK_310410.1 723 YVGNGIK|VE 0.053 . LdBPK_310410.1 727 GIKVEFK|RV 0.079 . LdBPK_310410.1 728 IKVEFKR|VD 0.152 . LdBPK_310410.1 731 EFKRVDR|NC 0.164 . LdBPK_310410.1 734 RVDRNCR|VF 0.153 . LdBPK_310410.1 758 AAEYQIR|TP 0.084 . LdBPK_310410.1 761 YQIRTPR|QP 0.214 . LdBPK_310410.1 775 EEIVDER|LR 0.082 . LdBPK_310410.1 777 IVDERLR|EF 0.091 . ____________________________^_________________

  • Fasta :-

    >LdBPK_310410.1 ATGCCTGCTGCAACGGCCGAGCCGCAGCCGTTTGAGTTCCCACCGGGCTACGTGATGCCG CTGCCCACGCGTCCGAGCAAGATGGACGAGGACACGCTGCACCCCGTGCGCGTGCCGACA CCGCTGCCGGACCTGCTGCCGCGCAGCATGAAGGACATCCAGAAGATGCGTAACCTGCAG TCCGACGGAGACACAGCCAAGAAGTACGTGCCACCGCGCCGCGACCTGCCGCCGCCGTAC GTGAACGACGACGAGTGCGACGAGTTCGAGGACAAGACGATCGACACGACCATCCTGAAC ATGTCGGAGAAGGACCGCACGAAGCGCATGGGCCATACCTACCAGTTAAACGGCCCCTCC GTTGAGGGCGACGTCACGCCGGTCTTCGAGAACGGCCTGCTCTTCAAGGTCGTGACGCCA GATGGCTCTTGGTACTACTACAACGACACGGACAAGTACGAGATGCATGTGAAGTTCACC TTCGGCGCCAAGTCAGACCTGCAGCCCGGCGAAAAGGTCGACATGTACGTTATGAGCACA AGCGAGCTGTCCGCCTCCCTCGTCGTCTTCCCTGGGGAGACGACGAAGCTGGTAGCCGGC AAGATCAACGGTTTCAAGTGCAGCGCCAAGGCCGTGCCACTGAACGACGACAAGCGCGAC ATCCTCTACGGCGAAGTCAACGACCGCATCGCCGACGACCTGATGGTCATGGCGCAGGCC ATCGGTGTGCGTGAGGACGACCTGACAGAGGAGAAGGTGCTGGCGTACTGCGAGGAGAAC GAGAAGCCGTACATCGACTGCGACTTCCGTCCGTGCGACTACTCGCTCTACCGCGCTGAC GTGGACACGTACCTGCCGCGCTTCATCCCGTGGCACCGCCCCTCCACCTGGATCCCGGAG GAGCAGCTCAAGGAGGTGCGCCTCTTCCGCCGCGACATCCTGCCGTCGCAAGTGACACAC GGCTCCATCGGCGACACCTACCTCGTCTCCGCCATCGCCGCCCTGACCGACGCCAGCGGC GACCGGCTGCACGACCTCTTCCGCCACCCGGTGAGCGCCGCCAACGGCAAGATCGAGCGT GCCCTCGGTGCCTACTGGGTCACGATAAACTTCAACGGCTGGTGGCTGCCGGTGCTGCTG GACGACTTCCTGCCTGCGACGCGTGACGGCCCCGAGTTCGCGCGGTGCGCAGTGGACATC CGGCGCATGTGGGTGGCGCTGCTGGAGAAGACCTACGCGAAAGTGCACGGCTCCTACGCG AACATCGCGAGCGGCGACCCGCTGGAGCCGCTGTCGGAGTTCACCGGCTTCCCAGTGACG CGCTACGAGAGCTTCTGGGAGGACGCGCAGGGCGGCGACGACATGCTGTTTCAGGAGATG CTGTCTTACAACAGGATGGGTCACTTGCAGGTGCTCTGCACCCCGTCCGACGGTGGCGAG GCATTCGGCAACGCGAACGTCGTCAGCGCCAACCCGGAGCTGGAGGCAACGTACGAGAAG ATGGGCCTCCTCCTGCACCATGGCTACGCAGTTCTGCAGACGGAGTACTTCGAGGACCTG GACCTCCGTCTGCTGCGCGTCCGCAACCCGTGGGGCAACGGCTCTGAGTGGACCGGCGCG TGGAGCAAGGACGACAAGCGCTGGAGCAAGTACCCATCCGTGCGCAACGCGTGCTACCGG CACGGCGGAAGCCCGACGGATGCCGACCGCACGTTCTGGGTAGAGTGGAGCGACGCGCTG AAGATCTTCTCCGGCGGTGGCTGCTGCCACCTGCGCACTCCGTGGTTCGACTACCGTGCC CGTGGCGAGTTTGCTCAGGGCATCCCGACCGTCTCTTTCGAGGTCAACGTGTCCGCGCCG ACGGAGGCCTACATCACTCTCTCGCAGGAGGACGAGCGCGACGACCCGTCGCTGGAGTAC CATGCACTCCTGCTGAGCGTGTTCCGGCACAGCGGCAAGAAGGAGAAGCTGGACGCGACC AGCAACTCGCTTGTGGAGAAGCCGGACCGCCAGCTCAAGTTCAACTTCTCGCGCGACGTG GCGATGAAGTACACCTTTTTGCCAGAGCACAGCCCGTACTTTGTCATCCCCCGCATCCAC GACCCCAGCGTGACGAAGCCGTACGTGATGGGCCTCCTGTGCGACACGTACGTTGGCAAC GGCATCAAGGTGGAGTTCAAGCGGGTGGACCGCAACTGCCGCGTCTTTGCTAACATGCCG TCCTTTGTGCAGGTAGGAATGATGGAGGACACAGCTGCTGAGTACCAGATCCGCACTCCA CGGCAGCCGATTGAGTGCATCGGGGAGGAGATCGTCGACGAGCGCCTGCGCGAGTTTGGC ATCCTGGAGGAGTAG
  • Download Fasta

  • Fasta :-

    MPAATAEPQPFEFPPGYVMPLPTRPSKMDEDTLHPVRVPTPLPDLLPRSMKDIQKMRNLQ SDGDTAKKYVPPRRDLPPPYVNDDECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPS VEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFTFGAKSDLQPGEKVDMYVMST SELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIADDLMVMAQA IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPE EQLKEVRLFRRDILPSQVTHGSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIER ALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDIRRMWVALLEKTYAKVHGSYA NIASGDPLEPLSEFTGFPVTRYESFWEDAQGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRVRNPWGNGSEWTGA WSKDDKRWSKYPSVRNACYRHGGSPTDADRTFWVEWSDALKIFSGGGCCHLRTPWFDYRA RGEFAQGIPTVSFEVNVSAPTEAYITLSQEDERDDPSLEYHALLLSVFRHSGKKEKLDAT SNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFVIPRIHDPSVTKPYVMGLLCDTYVGN GIKVEFKRVDRNCRVFANMPSFVQVGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFG ILEE

  • title: catalytic site
  • coordinates: T326,H507,N529
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_310410.1102 SILNMSEKDR0.997unspLdBPK_310410.1102 SILNMSEKDR0.997unspLdBPK_310410.1102 SILNMSEKDR0.997unspLdBPK_310410.1549 SDKRWSKYPS0.994unspLdBPK_310410.1564 SRHGGSPTDA0.997unspLdBPK_310410.1628 SYITLSQEDE0.997unspLdBPK_310410.1651 SVFRHSGKKE0.998unspLdBPK_310410.126 SPTRPSKMDE0.996unspLdBPK_310410.149 SLLPRSMKDI0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India