LdBPK_310420.1 | calpain-like protein, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_310420.1OTHER0.9999660.0000170.000017
No Results

  • Fasta :-

    >LdBPK_310420.1 MSATKAAITESSSNLAAASVVPEERPETRQYGLTDSLHISPANRMAAEKLVAFVQAVSDP EVLHVIYDYLEEHEKAVPRYCLATKACRELLERKEEMLMACLSTSGGAHESSQPSAVGAR RPRSVSVPQLVDSPDKKAETARAGEGLTEAQRLLQQIEETDGCDKGDDDDADMDEFDDLN YFPAPYTPSSRFNFGQPSVSGLVTRVFSEGMLYKIKTPKGEYHFYNDTLQEVMVVRVQCH LRGNEKINERAMLSPVASTGETEITIAVLPEETNFFMSGVAHMPHFMAKRVPVPRDYVSP SVTQSLRKINAEINAVRKALGKWSRASDQQAYLKCCLKNNLRFTDLNFRPSSESLYRPEF DAVVIPAVTWRRPEEYIYLAEVSQTRLFRGEISCFLVKQGDLSNHTVVAAMAAVAQFPAH VRWMFRHPVSAHVGKMERSQGCYRVTLLHNGWWHTYLVDDYVPASLRGPLFASCAEDPRR LWVQLLEKAYAKSLGSYAATCLVDAMEALGDFTGFPVRFLDSMWAAAAQGPRDGAFRSLF RYLELCVRAGCTVLLFSPPPTDEQSSATVDMSCKRSSRIMPVKGAVPQFLPGHIYFLRDV AFYEALDLRMVQLKNPWTWETKNKIHYEKKWRYTTWYDQPDPSLSAIASATTSLHGQVCS RVLASHALSPRACTDLSPEAVALNERKGTMWVEWGEALTAFAGGGVCYTMWDRHRYRVRN AFVEGRPRLALELKARRKVELLVTLSLETVSETLDNFGTVVAARPIPLHGTALAVVHRQA NQSAKVVRESCDDIESVTGCRTYVVARDVSIKVVVEPSTSSNGAAVLVVPLLDPSAVSAA AVGAGSGSSSNAASIAAAPEVRFVVSIVSDAVAGDGEDLSVHFVSLRRSCGVFTDSTTAF PLEGASRVTAQYQVCTKAGVATCEGSRISGNETKGM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_310420.1.fa Sequence name : LdBPK_310420 Sequence length : 936 VALUES OF COMPUTED PARAMETERS Coef20 : 4.747 CoefTot : 0.422 ChDiff : -5 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 1.841 0.199 0.604 MesoH : 0.278 0.897 -0.071 0.357 MuHd_075 : 23.611 13.502 7.485 4.100 MuHd_095 : 15.029 10.855 4.752 3.034 MuHd_100 : 11.369 8.660 2.845 2.369 MuHd_105 : 6.752 5.542 1.255 1.309 Hmax_075 : 10.900 10.100 1.801 3.520 Hmax_095 : 13.300 12.200 2.193 4.130 Hmax_100 : 14.300 12.300 2.062 4.150 Hmax_105 : 8.400 7.700 0.560 2.949 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9102 0.0898 DFMC : 0.8807 0.1193
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 936 LdBPK_310420.1 MSATKAAITESSSNLAAASVVPEERPETRQYGLTDSLHISPANRMAAEKLVAFVQAVSDPEVLHVIYDYLEEHEKAVPRY 80 CLATKACRELLERKEEMLMACLSTSGGAHESSQPSAVGARRPRSVSVPQLVDSPDKKAETARAGEGLTEAQRLLQQIEET 160 DGCDKGDDDDADMDEFDDLNYFPAPYTPSSRFNFGQPSVSGLVTRVFSEGMLYKIKTPKGEYHFYNDTLQEVMVVRVQCH 240 LRGNEKINERAMLSPVASTGETEITIAVLPEETNFFMSGVAHMPHFMAKRVPVPRDYVSPSVTQSLRKINAEINAVRKAL 320 GKWSRASDQQAYLKCCLKNNLRFTDLNFRPSSESLYRPEFDAVVIPAVTWRRPEEYIYLAEVSQTRLFRGEISCFLVKQG 400 DLSNHTVVAAMAAVAQFPAHVRWMFRHPVSAHVGKMERSQGCYRVTLLHNGWWHTYLVDDYVPASLRGPLFASCAEDPRR 480 LWVQLLEKAYAKSLGSYAATCLVDAMEALGDFTGFPVRFLDSMWAAAAQGPRDGAFRSLFRYLELCVRAGCTVLLFSPPP 560 TDEQSSATVDMSCKRSSRIMPVKGAVPQFLPGHIYFLRDVAFYEALDLRMVQLKNPWTWETKNKIHYEKKWRYTTWYDQP 640 DPSLSAIASATTSLHGQVCSRVLASHALSPRACTDLSPEAVALNERKGTMWVEWGEALTAFAGGGVCYTMWDRHRYRVRN 720 AFVEGRPRLALELKARRKVELLVTLSLETVSETLDNFGTVVAARPIPLHGTALAVVHRQANQSAKVVRESCDDIESVTGC 800 RTYVVARDVSIKVVVEPSTSSNGAAVLVVPLLDPSAVSAAAVGAGSGSSSNAASIAAAPEVRFVVSIVSDAVAGDGEDLS 880 VHFVSLRRSCGVFTDSTTAFPLEGASRVTAQYQVCTKAGVATCEGSRISGNETKGM 960 ................................................................................ 80 ..........................................P..................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ........................................................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_310420.1 5 --MSATK|AA 0.068 . LdBPK_310420.1 25 SVVPEER|PE 0.077 . LdBPK_310420.1 29 EERPETR|QY 0.096 . LdBPK_310420.1 44 HISPANR|MA 0.150 . LdBPK_310420.1 49 NRMAAEK|LV 0.083 . LdBPK_310420.1 75 YLEEHEK|AV 0.065 . LdBPK_310420.1 79 HEKAVPR|YC 0.097 . LdBPK_310420.1 85 RYCLATK|AC 0.062 . LdBPK_310420.1 88 LATKACR|EL 0.069 . LdBPK_310420.1 93 CRELLER|KE 0.076 . LdBPK_310420.1 94 RELLERK|EE 0.061 . LdBPK_310420.1 120 PSAVGAR|RP 0.080 . LdBPK_310420.1 121 SAVGARR|PR 0.155 . LdBPK_310420.1 123 VGARRPR|SV 0.623 *ProP* LdBPK_310420.1 136 LVDSPDK|KA 0.074 . LdBPK_310420.1 137 VDSPDKK|AE 0.099 . LdBPK_310420.1 142 KKAETAR|AG 0.139 . LdBPK_310420.1 152 GLTEAQR|LL 0.090 . LdBPK_310420.1 165 ETDGCDK|GD 0.060 . LdBPK_310420.1 191 PYTPSSR|FN 0.094 . LdBPK_310420.1 205 VSGLVTR|VF 0.109 . LdBPK_310420.1 214 SEGMLYK|IK 0.072 . LdBPK_310420.1 216 GMLYKIK|TP 0.060 . LdBPK_310420.1 219 YKIKTPK|GE 0.068 . LdBPK_310420.1 236 QEVMVVR|VQ 0.083 . LdBPK_310420.1 242 RVQCHLR|GN 0.118 . LdBPK_310420.1 246 HLRGNEK|IN 0.070 . LdBPK_310420.1 250 NEKINER|AM 0.068 . LdBPK_310420.1 289 MPHFMAK|RV 0.093 . LdBPK_310420.1 290 PHFMAKR|VP 0.102 . LdBPK_310420.1 295 KRVPVPR|DY 0.108 . LdBPK_310420.1 307 SVTQSLR|KI 0.096 . LdBPK_310420.1 308 VTQSLRK|IN 0.075 . LdBPK_310420.1 317 AEINAVR|KA 0.080 . LdBPK_310420.1 318 EINAVRK|AL 0.115 . LdBPK_310420.1 322 VRKALGK|WS 0.074 . LdBPK_310420.1 325 ALGKWSR|AS 0.136 . LdBPK_310420.1 334 DQQAYLK|CC 0.056 . LdBPK_310420.1 338 YLKCCLK|NN 0.053 . LdBPK_310420.1 342 CLKNNLR|FT 0.083 . LdBPK_310420.1 349 FTDLNFR|PS 0.076 . LdBPK_310420.1 357 SSESLYR|PE 0.098 . LdBPK_310420.1 371 IPAVTWR|RP 0.105 . LdBPK_310420.1 372 PAVTWRR|PE 0.113 . LdBPK_310420.1 386 AEVSQTR|LF 0.086 . LdBPK_310420.1 389 SQTRLFR|GE 0.204 . LdBPK_310420.1 398 ISCFLVK|QG 0.065 . LdBPK_310420.1 422 QFPAHVR|WM 0.085 . LdBPK_310420.1 426 HVRWMFR|HP 0.085 . LdBPK_310420.1 435 VSAHVGK|ME 0.078 . LdBPK_310420.1 438 HVGKMER|SQ 0.160 . LdBPK_310420.1 444 RSQGCYR|VT 0.078 . LdBPK_310420.1 467 YVPASLR|GP 0.065 . LdBPK_310420.1 479 SCAEDPR|RL 0.091 . LdBPK_310420.1 480 CAEDPRR|LW 0.117 . LdBPK_310420.1 488 WVQLLEK|AY 0.066 . LdBPK_310420.1 492 LEKAYAK|SL 0.101 . LdBPK_310420.1 518 FTGFPVR|FL 0.093 . LdBPK_310420.1 532 AAAQGPR|DG 0.072 . LdBPK_310420.1 537 PRDGAFR|SL 0.152 . LdBPK_310420.1 541 AFRSLFR|YL 0.097 . LdBPK_310420.1 548 YLELCVR|AG 0.076 . LdBPK_310420.1 574 TVDMSCK|RS 0.067 . LdBPK_310420.1 575 VDMSCKR|SS 0.228 . LdBPK_310420.1 578 SCKRSSR|IM 0.217 . LdBPK_310420.1 583 SRIMPVK|GA 0.093 . LdBPK_310420.1 598 GHIYFLR|DV 0.155 . LdBPK_310420.1 609 YEALDLR|MV 0.105 . LdBPK_310420.1 614 LRMVQLK|NP 0.072 . LdBPK_310420.1 622 PWTWETK|NK 0.062 . LdBPK_310420.1 624 TWETKNK|IH 0.070 . LdBPK_310420.1 629 NKIHYEK|KW 0.061 . LdBPK_310420.1 630 KIHYEKK|WR 0.099 . LdBPK_310420.1 632 HYEKKWR|YT 0.102 . LdBPK_310420.1 661 HGQVCSR|VL 0.080 . LdBPK_310420.1 671 SHALSPR|AC 0.104 . LdBPK_310420.1 686 AVALNER|KG 0.071 . LdBPK_310420.1 687 VALNERK|GT 0.113 . LdBPK_310420.1 713 CYTMWDR|HR 0.076 . LdBPK_310420.1 715 TMWDRHR|YR 0.084 . LdBPK_310420.1 717 WDRHRYR|VR 0.090 . LdBPK_310420.1 719 RHRYRVR|NA 0.123 . LdBPK_310420.1 726 NAFVEGR|PR 0.078 . LdBPK_310420.1 728 FVEGRPR|LA 0.071 . LdBPK_310420.1 734 RLALELK|AR 0.069 . LdBPK_310420.1 736 ALELKAR|RK 0.091 . LdBPK_310420.1 737 LELKARR|KV 0.132 . LdBPK_310420.1 738 ELKARRK|VE 0.066 . LdBPK_310420.1 764 GTVVAAR|PI 0.098 . LdBPK_310420.1 778 ALAVVHR|QA 0.146 . LdBPK_310420.1 785 QANQSAK|VV 0.101 . LdBPK_310420.1 788 QSAKVVR|ES 0.134 . LdBPK_310420.1 801 ESVTGCR|TY 0.074 . LdBPK_310420.1 807 RTYVVAR|DV 0.275 . LdBPK_310420.1 812 ARDVSIK|VV 0.069 . LdBPK_310420.1 862 AAAPEVR|FV 0.130 . LdBPK_310420.1 887 VHFVSLR|RS 0.087 . LdBPK_310420.1 888 HFVSLRR|SC 0.185 . LdBPK_310420.1 907 PLEGASR|VT 0.088 . LdBPK_310420.1 917 QYQVCTK|AG 0.059 . LdBPK_310420.1 927 ATCEGSR|IS 0.091 . LdBPK_310420.1 934 ISGNETK|GM 0.072 . ____________________________^_________________

  • Fasta :-

    >LdBPK_310420.1 ATGAGCGCGACAAAGGCAGCGATCACAGAATCCTCATCGAACCTCGCGGCGGCCTCGGTT GTGCCAGAGGAGCGGCCCGAGACGCGGCAGTACGGTCTTACCGACAGCCTGCACATCTCG CCTGCCAACCGCATGGCCGCAGAGAAGTTGGTGGCCTTTGTGCAGGCCGTCTCCGATCCG GAGGTGCTGCACGTCATCTACGACTACCTCGAGGAGCATGAGAAAGCGGTGCCGCGCTAC TGCCTCGCCACGAAGGCGTGCCGTGAGCTTCTGGAGCGCAAAGAAGAGATGCTGATGGCT TGCTTGTCCACCAGCGGCGGTGCTCACGAGTCATCACAGCCCAGTGCAGTTGGTGCCCGC CGCCCCCGTAGTGTTTCAGTGCCGCAGCTCGTGGACTCGCCAGACAAGAAGGCGGAGACA GCAAGGGCAGGGGAAGGCCTGACGGAGGCGCAGCGCCTCTTGCAGCAGATTGAGGAGACG GACGGCTGTGACAAGGGAGACGACGATGATGCCGATATGGATGAGTTTGATGACCTCAAT TACTTCCCGGCGCCCTACACACCATCCAGCCGCTTCAATTTTGGACAGCCGAGCGTCTCC GGTCTCGTCACTCGGGTTTTTTCGGAGGGCATGCTGTACAAGATCAAGACCCCAAAAGGC GAGTACCACTTCTACAACGATACCCTGCAGGAGGTGATGGTTGTACGCGTGCAGTGCCAT CTGCGCGGCAACGAGAAGATCAACGAACGTGCCATGCTCTCCCCCGTCGCCAGTACCGGC GAGACGGAGATTACGATCGCCGTATTGCCGGAGGAGACGAACTTTTTCATGAGTGGGGTG GCGCATATGCCTCACTTCATGGCAAAGCGAGTGCCGGTGCCGCGCGATTACGTCTCGCCG TCGGTGACGCAGTCGCTGCGCAAGATCAACGCCGAGATCAACGCTGTGCGCAAGGCACTT GGCAAGTGGAGCCGAGCCTCCGACCAGCAGGCGTACCTGAAGTGCTGTCTCAAGAACAAC CTCCGCTTCACAGACCTCAACTTCCGCCCGAGTTCGGAGAGCCTGTATCGCCCTGAGTTC GACGCGGTCGTCATACCGGCCGTCACATGGCGGCGGCCGGAGGAGTACATCTACCTGGCC GAGGTGTCGCAGACGCGTCTATTCCGCGGCGAGATTTCGTGTTTCCTGGTGAAGCAGGGT GACCTGAGCAACCACACGGTGGTGGCTGCGATGGCGGCGGTGGCGCAGTTCCCGGCCCAT GTGCGGTGGATGTTCCGCCACCCCGTGAGCGCGCACGTGGGCAAGATGGAGAGGTCGCAG GGCTGCTACCGAGTGACGCTGCTGCACAATGGGTGGTGGCACACCTACCTTGTCGACGAC TACGTGCCTGCGTCGCTGAGAGGACCGCTGTTTGCGAGCTGTGCCGAGGACCCGCGCCGG CTGTGGGTGCAGCTGCTCGAAAAGGCGTATGCCAAGTCGCTTGGCTCATACGCGGCGACG TGCCTCGTCGACGCCATGGAGGCCCTCGGCGACTTCACTGGATTCCCCGTACGCTTTCTC GACTCCATGTGGGCGGCCGCCGCGCAGGGGCCGAGGGATGGCGCGTTCCGGTCGCTCTTT CGCTACCTCGAGCTCTGTGTCCGGGCCGGCTGCACGGTGCTTCTCTTCTCTCCGCCCCCC ACCGACGAGCAGTCGAGTGCGACCGTGGACATGTCCTGCAAGCGTTCCTCGCGTATCATG CCGGTGAAGGGCGCGGTGCCGCAGTTCCTGCCCGGCCACATCTACTTCCTGCGCGACGTC GCCTTCTACGAGGCGCTAGATCTGCGCATGGTCCAGCTGAAGAACCCGTGGACGTGGGAG ACAAAAAACAAGATCCACTACGAGAAGAAGTGGAGGTACACGACGTGGTACGACCAGCCC GACCCCAGCCTCAGTGCCATTGCGTCCGCCACGACGAGCCTGCACGGACAGGTGTGCTCC CGCGTTCTGGCCTCGCACGCGCTCAGCCCTAGAGCCTGTACGGACTTGTCACCGGAGGCG GTCGCTCTAAACGAGCGCAAGGGCACGATGTGGGTAGAATGGGGGGAGGCGCTGACGGCG TTTGCGGGCGGCGGCGTGTGCTACACCATGTGGGACCGACACCGGTACCGTGTGCGGAAC GCCTTTGTGGAGGGCCGACCACGGCTGGCGCTTGAGCTGAAGGCGCGGCGCAAAGTGGAG CTGCTCGTGACGCTTTCGCTGGAGACGGTGAGCGAGACGCTCGACAACTTTGGCACCGTC GTCGCTGCCCGTCCCATCCCGCTCCACGGCACGGCGCTCGCGGTGGTGCACCGACAGGCG AACCAGTCGGCGAAGGTGGTCCGTGAGTCCTGCGACGACATCGAGAGCGTGACAGGCTGC CGAACATACGTCGTGGCGCGTGATGTGTCCATAAAGGTGGTCGTTGAGCCGAGCACGAGT AGCAACGGCGCCGCCGTACTGGTTGTCCCGCTGCTCGATCCAAGCGCCGTTAGCGCTGCC GCCGTCGGCGCCGGCAGCGGATCCTCCTCGAACGCCGCCTCGATAGCCGCTGCGCCCGAG GTGCGGTTTGTCGTGTCCATCGTCAGCGACGCCGTTGCGGGGGACGGGGAGGATTTGTCC GTCCACTTTGTGTCGCTGCGGCGCAGCTGCGGCGTCTTCACGGACTCAACCACGGCGTTC CCACTGGAGGGCGCCTCGCGCGTGACAGCACAGTACCAAGTGTGCACCAAGGCAGGCGTT GCGACGTGCGAGGGGTCTCGCATCTCTGGCAACGAAACGAAGGGTATGTGA
  • Download Fasta

  • Fasta :-

    MSATKAAITESSSNLAAASVVPEERPETRQYGLTDSLHISPANRMAAEKLVAFVQAVSDP EVLHVIYDYLEEHEKAVPRYCLATKACRELLERKEEMLMACLSTSGGAHESSQPSAVGAR RPRSVSVPQLVDSPDKKAETARAGEGLTEAQRLLQQIEETDGCDKGDDDDADMDEFDDLN YFPAPYTPSSRFNFGQPSVSGLVTRVFSEGMLYKIKTPKGEYHFYNDTLQEVMVVRVQCH LRGNEKINERAMLSPVASTGETEITIAVLPEETNFFMSGVAHMPHFMAKRVPVPRDYVSP SVTQSLRKINAEINAVRKALGKWSRASDQQAYLKCCLKNNLRFTDLNFRPSSESLYRPEF DAVVIPAVTWRRPEEYIYLAEVSQTRLFRGEISCFLVKQGDLSNHTVVAAMAAVAQFPAH VRWMFRHPVSAHVGKMERSQGCYRVTLLHNGWWHTYLVDDYVPASLRGPLFASCAEDPRR LWVQLLEKAYAKSLGSYAATCLVDAMEALGDFTGFPVRFLDSMWAAAAQGPRDGAFRSLF RYLELCVRAGCTVLLFSPPPTDEQSSATVDMSCKRSSRIMPVKGAVPQFLPGHIYFLRDV AFYEALDLRMVQLKNPWTWETKNKIHYEKKWRYTTWYDQPDPSLSAIASATTSLHGQVCS RVLASHALSPRACTDLSPEAVALNERKGTMWVEWGEALTAFAGGGVCYTMWDRHRYRVRN AFVEGRPRLALELKARRKVELLVTLSLETVSETLDNFGTVVAARPIPLHGTALAVVHRQA NQSAKVVRESCDDIESVTGCRTYVVARDVSIKVVVEPSTSSNGAAVLVVPLLDPSAVSAA AVGAGSGSSSNAASIAAAPEVRFVVSIVSDAVAGDGEDLSVHFVSLRRSCGVFTDSTTAF PLEGASRVTAQYQVCTKAGVATCEGSRISGNETKGM

  • title: catalytic site
  • coordinates: H405,H593,N615
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_310420.1354 SPSSESLYRP0.993unspLdBPK_310420.1354 SPSSESLYRP0.993unspLdBPK_310420.1354 SPSSESLYRP0.993unspLdBPK_310420.1572 STVDMSCKRS0.993unspLdBPK_310420.1577 SCKRSSRIMP0.994unspLdBPK_310420.1790 SVVRESCDDI0.998unspLdBPK_310420.1929 SGSRISGNET0.996unspLdBPK_310420.1258 SSPVASTGET0.991unspLdBPK_310420.1351 SNFRPSSESL0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India