LdBPK_310440.1 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_310440.1OTHER0.9999970.0000030.000000
No Results

  • Fasta :-

    >LdBPK_310440.1 MDGNIIRPVCDEDSVTDAMLEEFLRPPSSFALTDTAGDMLTASTLGSAARGPAPCTPAAA CTSALGAGSSSTFKSSHDSEVNQIGVGAFEGSVVHCASHLVGASPALPAELSHSDITSDD SGDFAFLTSNVRDADVYDLIRHYMLYCKQQEKELEDLEAECARLEAEQQHLYGAAIAADM TRKSLHMSAANSLSPPNSNETAATGAGGVSSSAAVDEFGEAHIDPLKSCPYLDPHDAAHN PQPYRYGQPAINGFYTPAFKNGILYRCVAADGSWIFYNDSEQYAMHIKYIFGASSVITAG PHASVNQRVSGEYEVQVTVWPQETEVLLVGQVNGFKNLSSAVPVNSSYTNPHASASTASA RALLNRFAHQSGKPNISLLSTEDVLECCAGQGSELAAAVGSLNGQHFVDPDFPPCGTSLY RKGVDDVFLWDMSWRRPCEYLPASQRSEACLFARSVLPTDPCAGEGGAVYLCSAACCLAE HPTQVARIFRHPVSADAGICERAVGAYRVALSHGGWWTPTVVDSYLPASLKGPNLGRCSH DLRKLWYPLLEKAYAKLHGSYAAMQCGSALEALQDLTGFPTFHFYDEWAEAVRSSAGARA SERTSYSPLSEHLFTSLEEKVHQRGYLVFLSLPDDGPAEAQAAQIGMMFGMSYAVLRLVR HGSFRLLQIRCPTLKLCSSGLWCAGSARWQQEPQLARLCGMDSDGGPELASLWLDWSEAL AMFEGGGVCCSRWDWAHDCRVRGFFKDGIPSFVLEVSVDTSAESAGPVEAYCILSQEDDR GMSPDHPNRALRPLMLSVSSHCGDDEAGEGVGGESSADQRIRHVCSTDPDTPTEHLNYVL GRDTALRVTLQPSEHPYYVIPRSRGDMRNKLFTLGFVSSTAPTKTGKLRMRAVQLPSNSA VFHNRRSFSTRQLESVAAVSFQIRGPDGVARVGCGSSIG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_310440.1.fa Sequence name : LdBPK_310440 Sequence length : 939 VALUES OF COMPUTED PARAMETERS Coef20 : 3.521 CoefTot : 0.000 ChDiff : -33 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.359 1.306 0.458 0.502 MesoH : 0.265 0.415 -0.135 0.245 MuHd_075 : 48.213 29.550 13.399 7.787 MuHd_095 : 5.897 8.200 2.703 2.912 MuHd_100 : 12.717 8.743 1.828 3.861 MuHd_105 : 16.859 13.624 3.674 5.365 Hmax_075 : 17.267 19.600 5.234 5.425 Hmax_095 : -2.900 6.213 -1.090 1.864 Hmax_100 : 4.500 9.000 -0.427 3.570 Hmax_105 : -5.900 6.417 -1.031 2.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9028 0.0972 DFMC : 0.8692 0.1308
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 939 LdBPK_310440.1 MDGNIIRPVCDEDSVTDAMLEEFLRPPSSFALTDTAGDMLTASTLGSAARGPAPCTPAAACTSALGAGSSSTFKSSHDSE 80 VNQIGVGAFEGSVVHCASHLVGASPALPAELSHSDITSDDSGDFAFLTSNVRDADVYDLIRHYMLYCKQQEKELEDLEAE 160 CARLEAEQQHLYGAAIAADMTRKSLHMSAANSLSPPNSNETAATGAGGVSSSAAVDEFGEAHIDPLKSCPYLDPHDAAHN 240 PQPYRYGQPAINGFYTPAFKNGILYRCVAADGSWIFYNDSEQYAMHIKYIFGASSVITAGPHASVNQRVSGEYEVQVTVW 320 PQETEVLLVGQVNGFKNLSSAVPVNSSYTNPHASASTASARALLNRFAHQSGKPNISLLSTEDVLECCAGQGSELAAAVG 400 SLNGQHFVDPDFPPCGTSLYRKGVDDVFLWDMSWRRPCEYLPASQRSEACLFARSVLPTDPCAGEGGAVYLCSAACCLAE 480 HPTQVARIFRHPVSADAGICERAVGAYRVALSHGGWWTPTVVDSYLPASLKGPNLGRCSHDLRKLWYPLLEKAYAKLHGS 560 YAAMQCGSALEALQDLTGFPTFHFYDEWAEAVRSSAGARASERTSYSPLSEHLFTSLEEKVHQRGYLVFLSLPDDGPAEA 640 QAAQIGMMFGMSYAVLRLVRHGSFRLLQIRCPTLKLCSSGLWCAGSARWQQEPQLARLCGMDSDGGPELASLWLDWSEAL 720 AMFEGGGVCCSRWDWAHDCRVRGFFKDGIPSFVLEVSVDTSAESAGPVEAYCILSQEDDRGMSPDHPNRALRPLMLSVSS 800 HCGDDEAGEGVGGESSADQRIRHVCSTDPDTPTEHLNYVLGRDTALRVTLQPSEHPYYVIPRSRGDMRNKLFTLGFVSST 880 APTKTGKLRMRAVQLPSNSAVFHNRRSFSTRQLESVAAVSFQIRGPDGVARVGCGSSIG 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ........................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_310440.1 7 MDGNIIR|PV 0.136 . LdBPK_310440.1 25 MLEEFLR|PP 0.075 . LdBPK_310440.1 50 TLGSAAR|GP 0.112 . LdBPK_310440.1 74 GSSSTFK|SS 0.154 . LdBPK_310440.1 132 FLTSNVR|DA 0.087 . LdBPK_310440.1 141 DVYDLIR|HY 0.072 . LdBPK_310440.1 148 HYMLYCK|QQ 0.068 . LdBPK_310440.1 152 YCKQQEK|EL 0.071 . LdBPK_310440.1 163 LEAECAR|LE 0.093 . LdBPK_310440.1 182 IAADMTR|KS 0.076 . LdBPK_310440.1 183 AADMTRK|SL 0.129 . LdBPK_310440.1 227 AHIDPLK|SC 0.065 . LdBPK_310440.1 245 HNPQPYR|YG 0.116 . LdBPK_310440.1 260 FYTPAFK|NG 0.051 . LdBPK_310440.1 266 KNGILYR|CV 0.164 . LdBPK_310440.1 288 QYAMHIK|YI 0.075 . LdBPK_310440.1 308 HASVNQR|VS 0.164 . LdBPK_310440.1 336 GQVNGFK|NL 0.065 . LdBPK_310440.1 361 ASTASAR|AL 0.099 . LdBPK_310440.1 366 ARALLNR|FA 0.226 . LdBPK_310440.1 373 FAHQSGK|PN 0.071 . LdBPK_310440.1 421 CGTSLYR|KG 0.067 . LdBPK_310440.1 422 GTSLYRK|GV 0.236 . LdBPK_310440.1 435 LWDMSWR|RP 0.093 . LdBPK_310440.1 436 WDMSWRR|PC 0.130 . LdBPK_310440.1 446 YLPASQR|SE 0.088 . LdBPK_310440.1 454 EACLFAR|SV 0.198 . LdBPK_310440.1 487 HPTQVAR|IF 0.097 . LdBPK_310440.1 490 QVARIFR|HP 0.215 . LdBPK_310440.1 502 DAGICER|AV 0.151 . LdBPK_310440.1 508 RAVGAYR|VA 0.083 . LdBPK_310440.1 531 YLPASLK|GP 0.060 . LdBPK_310440.1 537 KGPNLGR|CS 0.089 . LdBPK_310440.1 543 RCSHDLR|KL 0.091 . LdBPK_310440.1 544 CSHDLRK|LW 0.085 . LdBPK_310440.1 552 WYPLLEK|AY 0.053 . LdBPK_310440.1 556 LEKAYAK|LH 0.069 . LdBPK_310440.1 593 EWAEAVR|SS 0.125 . LdBPK_310440.1 599 RSSAGAR|AS 0.123 . LdBPK_310440.1 603 GARASER|TS 0.086 . LdBPK_310440.1 620 FTSLEEK|VH 0.061 . LdBPK_310440.1 624 EEKVHQR|GY 0.093 . LdBPK_310440.1 657 MSYAVLR|LV 0.132 . LdBPK_310440.1 660 AVLRLVR|HG 0.172 . LdBPK_310440.1 665 VRHGSFR|LL 0.113 . LdBPK_310440.1 670 FRLLQIR|CP 0.081 . LdBPK_310440.1 675 IRCPTLK|LC 0.074 . LdBPK_310440.1 688 WCAGSAR|WQ 0.094 . LdBPK_310440.1 697 QEPQLAR|LC 0.083 . LdBPK_310440.1 732 GGVCCSR|WD 0.088 . LdBPK_310440.1 740 DWAHDCR|VR 0.084 . LdBPK_310440.1 742 AHDCRVR|GF 0.085 . LdBPK_310440.1 746 RVRGFFK|DG 0.078 . LdBPK_310440.1 780 LSQEDDR|GM 0.092 . LdBPK_310440.1 789 SPDHPNR|AL 0.114 . LdBPK_310440.1 792 HPNRALR|PL 0.341 . LdBPK_310440.1 820 ESSADQR|IR 0.089 . LdBPK_310440.1 822 SADQRIR|HV 0.144 . LdBPK_310440.1 842 LNYVLGR|DT 0.113 . LdBPK_310440.1 847 GRDTALR|VT 0.076 . LdBPK_310440.1 862 PYYVIPR|SR 0.164 . LdBPK_310440.1 864 YVIPRSR|GD 0.078 . LdBPK_310440.1 868 RSRGDMR|NK 0.095 . LdBPK_310440.1 870 RGDMRNK|LF 0.063 . LdBPK_310440.1 884 SSTAPTK|TG 0.058 . LdBPK_310440.1 887 APTKTGK|LR 0.061 . LdBPK_310440.1 889 TKTGKLR|MR 0.121 . LdBPK_310440.1 891 TGKLRMR|AV 0.110 . LdBPK_310440.1 905 SAVFHNR|RS 0.092 . LdBPK_310440.1 906 AVFHNRR|SF 0.210 . LdBPK_310440.1 911 RRSFSTR|QL 0.214 . LdBPK_310440.1 924 AVSFQIR|GP 0.122 . LdBPK_310440.1 931 GPDGVAR|VG 0.101 . ____________________________^_________________

  • Fasta :-

    >LdBPK_310440.1 ATGGACGGCAACATCATCCGCCCCGTTTGCGACGAAGACTCCGTCACGGATGCCATGCTG GAGGAGTTCCTGCGGCCACCGTCATCGTTCGCCTTGACAGACACCGCGGGCGATATGCTG ACTGCCTCTACCCTTGGCAGCGCGGCGCGGGGACCGGCTCCCTGCACCCCTGCAGCGGCC TGCACGTCCGCGTTGGGGGCTGGCTCCTCGTCAACCTTCAAAAGCTCGCACGATAGCGAG GTTAACCAAATCGGCGTGGGGGCCTTCGAGGGAAGTGTTGTGCACTGTGCAAGTCATCTC GTCGGCGCCAGCCCTGCACTGCCTGCGGAACTGTCGCACTCGGATATCACGAGCGACGAC AGCGGCGACTTTGCCTTTCTCACGAGCAATGTGCGCGATGCCGACGTGTACGACCTCATT CGTCACTACATGTTGTATTGCAAGCAGCAGGAGAAGGAGCTGGAGGATCTGGAGGCGGAA TGCGCACGGCTGGAGGCGGAGCAACAGCACCTCTACGGCGCCGCTATTGCGGCTGACATG ACTCGAAAATCTTTGCACATGTCGGCTGCCAACTCTCTGTCTCCGCCGAACTCAAACGAA ACTGCGGCAACAGGAGCCGGCGGCGTCTCCTCGTCCGCCGCTGTCGACGAGTTCGGCGAG GCTCACATCGACCCGCTGAAGTCGTGCCCTTACTTGGATCCACACGACGCCGCTCACAAC CCGCAGCCGTATCGCTACGGACAGCCCGCCATCAATGGCTTCTACACCCCGGCTTTCAAG AATGGCATTCTCTACCGCTGCGTTGCGGCCGACGGGTCGTGGATATTCTACAACGACTCG GAGCAGTACGCGATGCACATAAAATATATCTTCGGCGCCTCATCCGTCATTACGGCCGGC CCGCACGCCTCTGTGAACCAGCGGGTGTCCGGCGAGTATGAGGTGCAAGTGACAGTCTGG CCACAGGAGACGGAGGTGCTGCTTGTAGGTCAAGTAAACGGCTTCAAGAATCTCTCTTCC GCCGTGCCGGTGAATTCCAGCTATACGAATCCACACGCCAGTGCCTCAACCGCATCTGCG CGCGCTCTGCTGAATCGCTTCGCCCACCAGTCGGGAAAGCCGAATATCTCGCTGCTCTCC ACGGAGGACGTGCTGGAGTGTTGTGCGGGCCAAGGCAGCGAGTTGGCTGCCGCTGTCGGG TCTTTGAATGGGCAACATTTTGTCGACCCCGACTTTCCGCCCTGTGGCACATCGCTTTAC CGCAAAGGTGTCGATGACGTCTTCCTCTGGGATATGTCCTGGCGGCGCCCCTGCGAGTAC CTGCCCGCCTCACAGCGCTCGGAAGCGTGCCTCTTCGCTCGCTCGGTGCTTCCGACAGAC CCGTGCGCGGGGGAAGGCGGTGCGGTGTACCTGTGCAGTGCCGCCTGCTGTCTCGCTGAG CACCCCACGCAGGTCGCTCGAATTTTTCGGCACCCCGTCTCTGCGGATGCCGGCATCTGC GAGCGCGCTGTCGGGGCATACCGCGTCGCACTGAGCCACGGCGGCTGGTGGACGCCCACC GTCGTCGATAGTTACTTGCCAGCGTCGCTCAAGGGCCCGAACCTGGGCCGCTGCTCTCAC GACTTGCGCAAGCTCTGGTATCCGCTGCTCGAAAAGGCGTACGCGAAGCTGCACGGTTCC TACGCTGCCATGCAATGCGGTAGCGCGCTCGAGGCGCTGCAGGATCTCACCGGATTTCCG ACGTTTCACTTCTATGATGAGTGGGCGGAGGCGGTGCGGAGCAGTGCCGGCGCGCGCGCG AGCGAACGCACCTCCTACAGCCCACTGTCCGAGCACCTGTTCACCTCTCTGGAGGAGAAG GTGCATCAACGCGGCTATCTCGTGTTCCTGAGCCTGCCGGACGACGGGCCGGCCGAGGCC CAGGCAGCGCAAATTGGCATGATGTTCGGCATGTCGTACGCGGTTCTGCGGCTCGTTCGG CACGGCAGTTTTCGGCTTCTTCAAATTCGGTGCCCCACCTTGAAGCTCTGTAGCAGCGGG CTGTGGTGTGCTGGGAGCGCACGGTGGCAGCAGGAGCCGCAGCTAGCCCGCTTGTGCGGG ATGGATAGTGATGGCGGGCCGGAGCTCGCGAGTTTGTGGTTGGACTGGTCTGAGGCTCTA GCTATGTTTGAGGGGGGCGGTGTGTGCTGTAGTCGTTGGGACTGGGCACATGACTGCCGC GTGCGAGGTTTCTTCAAAGACGGGATACCCTCTTTCGTCTTGGAGGTGAGCGTCGACACC TCTGCAGAGAGCGCAGGTCCCGTGGAAGCGTACTGCATCTTGTCCCAGGAGGACGATCGC GGTATGTCTCCAGATCACCCGAACCGAGCGCTGCGCCCACTGATGCTCTCTGTCAGCAGC CATTGCGGCGACGATGAGGCGGGCGAGGGTGTCGGCGGGGAGTCCTCGGCTGATCAGCGC ATTCGGCATGTGTGCTCCACGGACCCAGACACCCCCACAGAGCACCTGAACTACGTCTTA GGCCGCGATACGGCGCTCCGTGTCACCTTGCAGCCCTCGGAGCACCCGTACTACGTCATC CCCCGCTCACGGGGGGATATGCGCAACAAGCTCTTCACACTGGGCTTTGTCTCCTCCACA GCGCCGACAAAAACGGGAAAGCTGCGGATGCGGGCGGTGCAGCTCCCGTCTAACTCTGCG GTGTTTCACAACCGACGCAGCTTCTCGACTCGGCAACTCGAGAGCGTGGCGGCGGTGTCG TTTCAGATTCGCGGGCCGGACGGGGTTGCACGCGTAGGGTGCGGCAGCAGCATTGGCTGA
  • Download Fasta

  • Fasta :-

    MDGNIIRPVCDEDSVTDAMLEEFLRPPSSFALTDTAGDMLTASTLGSAARGPAPCTPAAA CTSALGAGSSSTFKSSHDSEVNQIGVGAFEGSVVHCASHLVGASPALPAELSHSDITSDD SGDFAFLTSNVRDADVYDLIRHYMLYCKQQEKELEDLEAECARLEAEQQHLYGAAIAADM TRKSLHMSAANSLSPPNSNETAATGAGGVSSSAAVDEFGEAHIDPLKSCPYLDPHDAAHN PQPYRYGQPAINGFYTPAFKNGILYRCVAADGSWIFYNDSEQYAMHIKYIFGASSVITAG PHASVNQRVSGEYEVQVTVWPQETEVLLVGQVNGFKNLSSAVPVNSSYTNPHASASTASA RALLNRFAHQSGKPNISLLSTEDVLECCAGQGSELAAAVGSLNGQHFVDPDFPPCGTSLY RKGVDDVFLWDMSWRRPCEYLPASQRSEACLFARSVLPTDPCAGEGGAVYLCSAACCLAE HPTQVARIFRHPVSADAGICERAVGAYRVALSHGGWWTPTVVDSYLPASLKGPNLGRCSH DLRKLWYPLLEKAYAKLHGSYAAMQCGSALEALQDLTGFPTFHFYDEWAEAVRSSAGARA SERTSYSPLSEHLFTSLEEKVHQRGYLVFLSLPDDGPAEAQAAQIGMMFGMSYAVLRLVR HGSFRLLQIRCPTLKLCSSGLWCAGSARWQQEPQLARLCGMDSDGGPELASLWLDWSEAL AMFEGGGVCCSRWDWAHDCRVRGFFKDGIPSFVLEVSVDTSAESAGPVEAYCILSQEDDR GMSPDHPNRALRPLMLSVSSHCGDDEAGEGVGGESSADQRIRHVCSTDPDTPTEHLNYVL GRDTALRVTLQPSEHPYYVIPRSRGDMRNKLFTLGFVSSTAPTKTGKLRMRAVQLPSNSA VFHNRRSFSTRQLESVAAVSFQIRGPDGVARVGCGSSIG

    No Results
  • title: catalytic site
  • coordinates: V469,M651,C671
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_310440.1605 SSERTSYSPL0.994unspLdBPK_310440.1605 SSERTSYSPL0.994unspLdBPK_310440.1605 SSERTSYSPL0.994unspLdBPK_310440.1775 SYCILSQEDD0.995unspLdBPK_310440.1815 SVGGESSADQ0.992unspLdBPK_310440.1863 SVIPRSRGDM0.993unspLdBPK_310440.1909 SRRSFSTRQL0.993unspLdBPK_310440.175 SSTFKSSHDS0.995unspLdBPK_310440.1310 SNQRVSGEYE0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India