LdBPK_310480.1 | calpain-like cysteine peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_310480.1OTHER0.8771270.1093950.013478
No Results

  • Fasta :-

    >LdBPK_310480.1 MGTRRRRTIFCAASLLVVVVSLWPRQYRFLCLLFRFHGSVRIRHGITAILILLLFRLSPA PTQLQWFQRLMALCGGSRITSKAGKHYQQKKVHDFKYGGPAVKGDCYPLFEDGRCYRVEV DRHKWFLYNDSLDMEMHVTFTFQKTTAVYKTQHGRTTVRKTPNGGTQCSVVVYPLETLPY VKFAKKTQILYSAACMSRDLAPGYIEKINREAKAKCMNETQKVAGVAGVSRSEEEILYKC RKSKIPYIDMRFHPSEAALRRPHDKQSVSNMHAITWKRPQDYIPAIAHKAIKLFRHGVSA AGIGQGHLGDCWLMCSIAVVAESKTMVKDIFRHPVSQSQRKKEERAGGYRVYINKNGWFH NVIVDSYLPTYNGAVYFARSAGDPYELWVSLLEKAYAKLHGSYASIVGGNPLHALQDLTG FPVYSFTNAWKAAANGEEAASQFFKDLLRYRKNGYLISISTPGTQTSLHNAGSGNANEAS LEARYKAAGLSTGHSYSVLKVRQFVIPRVKLLKIRNPWGSGDEWTGAWGKNSTKWQKHSL VRRSCKPSKVSDGTFWIEWRDAVQFFEGGGVCMVKKAWYQYRFPGQFIGIIPSVVLKIEL KKQQKMLFTLSQKDRRLRSPDDPDQLYKGLLISVTGHNMEKGMQQIVALSTDNPEVHPPE KYEYMLARDVGLELELDPAQGPFYVIPRIMATNQNGPMDFTLGMLTPSKSTARGLRVSFV HLPDTCPTFRNLASFHVNGEVATHVQFQYKKRGGAPRVKAGITVFEATNVKQTYPFQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_310480.1.fa Sequence name : LdBPK_310480 Sequence length : 777 VALUES OF COMPUTED PARAMETERS Coef20 : 5.441 CoefTot : -0.065 ChDiff : 49 ZoneTo : 93 KR : 16 DE : 0 CleavSite : 80 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.053 2.165 0.403 0.726 MesoH : 0.040 0.883 -0.150 0.286 MuHd_075 : 33.920 14.048 7.923 6.886 MuHd_095 : 35.465 19.913 10.590 8.121 MuHd_100 : 36.787 18.072 9.750 9.031 MuHd_105 : 39.566 23.280 10.032 10.452 Hmax_075 : 13.400 13.767 -1.585 3.520 Hmax_095 : 8.200 24.763 -1.907 3.810 Hmax_100 : 10.600 19.100 1.819 5.860 Hmax_105 : 15.283 18.200 2.334 6.498 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0022 0.9978 DFMC : 0.0010 0.9990 This protein is probably imported in mitochondria. f(Ser) = 0.0645 f(Arg) = 0.1290 CMi = 0.25740 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 777 LdBPK_310480.1 MGTRRRRTIFCAASLLVVVVSLWPRQYRFLCLLFRFHGSVRIRHGITAILILLLFRLSPAPTQLQWFQRLMALCGGSRIT 80 SKAGKHYQQKKVHDFKYGGPAVKGDCYPLFEDGRCYRVEVDRHKWFLYNDSLDMEMHVTFTFQKTTAVYKTQHGRTTVRK 160 TPNGGTQCSVVVYPLETLPYVKFAKKTQILYSAACMSRDLAPGYIEKINREAKAKCMNETQKVAGVAGVSRSEEEILYKC 240 RKSKIPYIDMRFHPSEAALRRPHDKQSVSNMHAITWKRPQDYIPAIAHKAIKLFRHGVSAAGIGQGHLGDCWLMCSIAVV 320 AESKTMVKDIFRHPVSQSQRKKEERAGGYRVYINKNGWFHNVIVDSYLPTYNGAVYFARSAGDPYELWVSLLEKAYAKLH 400 GSYASIVGGNPLHALQDLTGFPVYSFTNAWKAAANGEEAASQFFKDLLRYRKNGYLISISTPGTQTSLHNAGSGNANEAS 480 LEARYKAAGLSTGHSYSVLKVRQFVIPRVKLLKIRNPWGSGDEWTGAWGKNSTKWQKHSLVRRSCKPSKVSDGTFWIEWR 560 DAVQFFEGGGVCMVKKAWYQYRFPGQFIGIIPSVVLKIELKKQQKMLFTLSQKDRRLRSPDDPDQLYKGLLISVTGHNME 640 KGMQQIVALSTDNPEVHPPEKYEYMLARDVGLELELDPAQGPFYVIPRIMATNQNGPMDFTLGMLTPSKSTARGLRVSFV 720 HLPDTCPTFRNLASFHVNGEVATHVQFQYKKRGGAPRVKAGITVFEATNVKQTYPFQ 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ......................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_310480.1 4 ---MGTR|RR 0.073 . LdBPK_310480.1 5 --MGTRR|RR 0.095 . LdBPK_310480.1 6 -MGTRRR|RT 0.113 . LdBPK_310480.1 7 MGTRRRR|TI 0.388 . LdBPK_310480.1 25 VVSLWPR|QY 0.079 . LdBPK_310480.1 28 LWPRQYR|FL 0.301 . LdBPK_310480.1 35 FLCLLFR|FH 0.094 . LdBPK_310480.1 41 RFHGSVR|IR 0.093 . LdBPK_310480.1 43 HGSVRIR|HG 0.117 . LdBPK_310480.1 56 LILLLFR|LS 0.062 . LdBPK_310480.1 69 QLQWFQR|LM 0.095 . LdBPK_310480.1 78 ALCGGSR|IT 0.100 . LdBPK_310480.1 82 GSRITSK|AG 0.070 . LdBPK_310480.1 85 ITSKAGK|HY 0.082 . LdBPK_310480.1 90 GKHYQQK|KV 0.102 . LdBPK_310480.1 91 KHYQQKK|VH 0.106 . LdBPK_310480.1 96 KKVHDFK|YG 0.090 . LdBPK_310480.1 103 YGGPAVK|GD 0.059 . LdBPK_310480.1 114 PLFEDGR|CY 0.082 . LdBPK_310480.1 117 EDGRCYR|VE 0.165 . LdBPK_310480.1 122 YRVEVDR|HK 0.091 . LdBPK_310480.1 124 VEVDRHK|WF 0.056 . LdBPK_310480.1 144 VTFTFQK|TT 0.063 . LdBPK_310480.1 150 KTTAVYK|TQ 0.059 . LdBPK_310480.1 155 YKTQHGR|TT 0.096 . LdBPK_310480.1 159 HGRTTVR|KT 0.105 . LdBPK_310480.1 160 GRTTVRK|TP 0.099 . LdBPK_310480.1 182 ETLPYVK|FA 0.063 . LdBPK_310480.1 185 PYVKFAK|KT 0.070 . LdBPK_310480.1 186 YVKFAKK|TQ 0.069 . LdBPK_310480.1 198 SAACMSR|DL 0.131 . LdBPK_310480.1 207 APGYIEK|IN 0.063 . LdBPK_310480.1 210 YIEKINR|EA 0.103 . LdBPK_310480.1 213 KINREAK|AK 0.259 . LdBPK_310480.1 215 NREAKAK|CM 0.077 . LdBPK_310480.1 222 CMNETQK|VA 0.089 . LdBPK_310480.1 231 GVAGVSR|SE 0.143 . LdBPK_310480.1 239 EEEILYK|CR 0.060 . LdBPK_310480.1 241 EILYKCR|KS 0.074 . LdBPK_310480.1 242 ILYKCRK|SK 0.150 . LdBPK_310480.1 244 YKCRKSK|IP 0.130 . LdBPK_310480.1 251 IPYIDMR|FH 0.088 . LdBPK_310480.1 260 PSEAALR|RP 0.080 . LdBPK_310480.1 261 SEAALRR|PH 0.188 . LdBPK_310480.1 265 LRRPHDK|QS 0.084 . LdBPK_310480.1 277 MHAITWK|RP 0.069 . LdBPK_310480.1 278 HAITWKR|PQ 0.167 . LdBPK_310480.1 289 IPAIAHK|AI 0.075 . LdBPK_310480.1 292 IAHKAIK|LF 0.072 . LdBPK_310480.1 295 KAIKLFR|HG 0.083 . LdBPK_310480.1 324 AVVAESK|TM 0.056 . LdBPK_310480.1 328 ESKTMVK|DI 0.075 . LdBPK_310480.1 332 MVKDIFR|HP 0.071 . LdBPK_310480.1 340 PVSQSQR|KK 0.099 . LdBPK_310480.1 341 VSQSQRK|KE 0.094 . LdBPK_310480.1 342 SQSQRKK|EE 0.154 . LdBPK_310480.1 345 QRKKEER|AG 0.108 . LdBPK_310480.1 350 ERAGGYR|VY 0.089 . LdBPK_310480.1 355 YRVYINK|NG 0.060 . LdBPK_310480.1 379 GAVYFAR|SA 0.256 . LdBPK_310480.1 394 WVSLLEK|AY 0.068 . LdBPK_310480.1 398 LEKAYAK|LH 0.063 . LdBPK_310480.1 431 SFTNAWK|AA 0.080 . LdBPK_310480.1 445 AASQFFK|DL 0.099 . LdBPK_310480.1 449 FFKDLLR|YR 0.073 . LdBPK_310480.1 451 KDLLRYR|KN 0.087 . LdBPK_310480.1 452 DLLRYRK|NG 0.104 . LdBPK_310480.1 484 EASLEAR|YK 0.173 . LdBPK_310480.1 486 SLEARYK|AA 0.090 . LdBPK_310480.1 500 HSYSVLK|VR 0.060 . LdBPK_310480.1 502 YSVLKVR|QF 0.085 . LdBPK_310480.1 508 RQFVIPR|VK 0.070 . LdBPK_310480.1 510 FVIPRVK|LL 0.057 . LdBPK_310480.1 513 PRVKLLK|IR 0.065 . LdBPK_310480.1 515 VKLLKIR|NP 0.090 . LdBPK_310480.1 530 WTGAWGK|NS 0.068 . LdBPK_310480.1 534 WGKNSTK|WQ 0.064 . LdBPK_310480.1 537 NSTKWQK|HS 0.060 . LdBPK_310480.1 542 QKHSLVR|RS 0.079 . LdBPK_310480.1 543 KHSLVRR|SC 0.385 . LdBPK_310480.1 546 LVRRSCK|PS 0.177 . LdBPK_310480.1 549 RSCKPSK|VS 0.070 . LdBPK_310480.1 560 TFWIEWR|DA 0.137 . LdBPK_310480.1 575 GGVCMVK|KA 0.069 . LdBPK_310480.1 576 GVCMVKK|AW 0.136 . LdBPK_310480.1 582 KAWYQYR|FP 0.174 . LdBPK_310480.1 597 IPSVVLK|IE 0.070 . LdBPK_310480.1 601 VLKIELK|KQ 0.062 . LdBPK_310480.1 602 LKIELKK|QQ 0.087 . LdBPK_310480.1 605 ELKKQQK|ML 0.065 . LdBPK_310480.1 613 LFTLSQK|DR 0.054 . LdBPK_310480.1 615 TLSQKDR|RL 0.097 . LdBPK_310480.1 616 LSQKDRR|LR 0.125 . LdBPK_310480.1 618 QKDRRLR|SP 0.312 . LdBPK_310480.1 628 DPDQLYK|GL 0.068 . LdBPK_310480.1 641 TGHNMEK|GM 0.073 . LdBPK_310480.1 661 EVHPPEK|YE 0.062 . LdBPK_310480.1 668 YEYMLAR|DV 0.233 . LdBPK_310480.1 688 PFYVIPR|IM 0.089 . LdBPK_310480.1 709 GMLTPSK|ST 0.085 . LdBPK_310480.1 713 PSKSTAR|GL 0.128 . LdBPK_310480.1 716 STARGLR|VS 0.233 . LdBPK_310480.1 730 DTCPTFR|NL 0.073 . LdBPK_310480.1 750 HVQFQYK|KR 0.077 . LdBPK_310480.1 751 VQFQYKK|RG 0.084 . LdBPK_310480.1 752 QFQYKKR|GG 0.200 . LdBPK_310480.1 757 KRGGAPR|VK 0.109 . LdBPK_310480.1 759 GGAPRVK|AG 0.069 . LdBPK_310480.1 771 FEATNVK|QT 0.064 . ____________________________^_________________

  • Fasta :-

    >LdBPK_310480.1 ATGGGCACACGCCGGAGAAGGACAATCTTCTGTGCTGCGTCATTACTCGTTGTCGTGGTA TCTCTGTGGCCTCGACAGTATCGCTTTTTGTGTCTGCTGTTTCGTTTTCACGGATCTGTT CGCATACGTCACGGCATCACTGCGATCCTTATCCTGCTTCTCTTCCGCCTCTCTCCCGCA CCCACACAGCTGCAGTGGTTTCAACGACTAATGGCGCTCTGCGGCGGCAGCCGCATCACG AGCAAGGCAGGGAAACACTATCAACAGAAGAAGGTGCACGACTTCAAGTATGGCGGCCCT GCGGTCAAGGGGGACTGCTACCCCCTCTTTGAAGACGGCCGATGCTACCGGGTAGAGGTA GACAGGCACAAGTGGTTTCTCTACAACGACTCGCTGGACATGGAGATGCACGTCACCTTC ACCTTTCAAAAAACGACGGCCGTGTACAAAACACAGCATGGCCGGACGACGGTGAGGAAG ACGCCCAACGGTGGGACGCAGTGCTCCGTCGTCGTCTACCCCCTGGAGACGCTGCCCTAC GTGAAGTTCGCCAAGAAGACGCAGATCTTGTATAGCGCCGCGTGCATGTCGCGCGACTTG GCCCCGGGTTACATTGAGAAGATTAACCGCGAGGCGAAGGCGAAGTGCATGAACGAGACG CAAAAAGTAGCCGGCGTGGCTGGGGTGAGCCGCAGCGAGGAGGAAATCCTGTACAAGTGC CGCAAGAGCAAGATCCCTTACATCGATATGCGCTTCCACCCATCTGAGGCTGCTCTGAGG CGACCTCACGACAAGCAGAGCGTGTCAAACATGCACGCCATCACGTGGAAACGGCCGCAG GACTACATACCGGCGATAGCGCACAAGGCGATCAAGCTGTTCCGCCACGGCGTGAGCGCT GCCGGCATTGGGCAGGGTCACCTCGGCGACTGCTGGCTCATGTGCTCGATCGCGGTCGTG GCGGAGAGCAAGACGATGGTGAAGGACATTTTCCGCCACCCTGTCTCCCAGTCTCAGCGA AAGAAAGAGGAGCGGGCGGGCGGCTACCGCGTGTACATCAATAAGAACGGCTGGTTCCAC AACGTCATTGTGGACAGCTACCTGCCGACGTACAATGGAGCCGTTTACTTTGCCCGCTCC GCCGGGGACCCGTACGAGTTGTGGGTGTCGCTGCTGGAGAAGGCGTACGCCAAGCTGCAC GGCTCGTATGCGTCCATTGTCGGCGGCAATCCTCTGCACGCCCTGCAGGATTTGACGGGG TTTCCGGTGTACTCCTTCACAAACGCGTGGAAGGCGGCGGCGAACGGGGAGGAGGCCGCA TCGCAGTTCTTCAAGGACCTGCTGCGCTACCGCAAGAATGGCTACCTCATCTCCATCAGC ACTCCAGGCACGCAGACGAGCTTGCACAACGCTGGTAGCGGGAACGCGAACGAGGCTTCA CTTGAGGCGCGCTACAAGGCGGCGGGACTGAGCACCGGCCACTCCTACTCGGTGCTGAAG GTGCGCCAGTTTGTCATCCCGCGAGTGAAGCTGCTGAAGATCCGCAACCCGTGGGGAAGC GGTGACGAGTGGACCGGCGCATGGGGCAAGAACAGCACCAAGTGGCAGAAGCACTCCTTG GTGCGTCGGTCGTGCAAGCCGAGCAAGGTGAGCGACGGCACCTTCTGGATAGAGTGGAGG GACGCGGTGCAGTTCTTTGAGGGCGGCGGGGTCTGCATGGTGAAGAAGGCCTGGTACCAG TATCGCTTCCCTGGCCAGTTTATTGGTATCATTCCGTCCGTGGTGCTCAAGATCGAGCTC AAAAAGCAGCAGAAGATGCTCTTCACCCTGTCTCAGAAGGACCGCCGCTTGCGGAGCCCC GACGACCCGGATCAGCTGTACAAGGGGCTGCTTATCTCCGTCACGGGGCACAACATGGAG AAGGGCATGCAGCAGATTGTGGCCCTCAGCACCGATAACCCCGAGGTGCATCCACCAGAA AAGTACGAGTACATGCTTGCCCGTGACGTTGGCCTCGAGCTCGAGCTCGACCCCGCACAA GGGCCGTTCTACGTCATTCCGCGCATCATGGCGACGAACCAAAACGGCCCGATGGACTTC ACCCTGGGCATGCTAACGCCCAGCAAGTCAACCGCGAGGGGCCTGCGGGTGTCCTTTGTG CACCTGCCCGACACGTGCCCGACGTTCCGCAACTTGGCATCTTTCCACGTGAACGGGGAG GTAGCGACACATGTGCAGTTTCAGTACAAGAAGCGCGGCGGTGCACCCCGCGTAAAGGCC GGCATCACCGTCTTCGAGGCCACCAACGTGAAGCAGACGTACCCCTTTCAATAA
  • Download Fasta

  • Fasta :-

    MGTRRRRTIFCAASLLVVVVSLWPRQYRFLCLLFRFHGSVRIRHGITAILILLLFRLSPA PTQLQWFQRLMALCGGSRITSKAGKHYQQKKVHDFKYGGPAVKGDCYPLFEDGRCYRVEV DRHKWFLYNDSLDMEMHVTFTFQKTTAVYKTQHGRTTVRKTPNGGTQCSVVVYPLETLPY VKFAKKTQILYSAACMSRDLAPGYIEKINREAKAKCMNETQKVAGVAGVSRSEEEILYKC RKSKIPYIDMRFHPSEAALRRPHDKQSVSNMHAITWKRPQDYIPAIAHKAIKLFRHGVSA AGIGQGHLGDCWLMCSIAVVAESKTMVKDIFRHPVSQSQRKKEERAGGYRVYINKNGWFH NVIVDSYLPTYNGAVYFARSAGDPYELWVSLLEKAYAKLHGSYASIVGGNPLHALQDLTG FPVYSFTNAWKAAANGEEAASQFFKDLLRYRKNGYLISISTPGTQTSLHNAGSGNANEAS LEARYKAAGLSTGHSYSVLKVRQFVIPRVKLLKIRNPWGSGDEWTGAWGKNSTKWQKHSL VRRSCKPSKVSDGTFWIEWRDAVQFFEGGGVCMVKKAWYQYRFPGQFIGIIPSVVLKIEL KKQQKMLFTLSQKDRRLRSPDDPDQLYKGLLISVTGHNMEKGMQQIVALSTDNPEVHPPE KYEYMLARDVGLELELDPAQGPFYVIPRIMATNQNGPMDFTLGMLTPSKSTARGLRVSFV HLPDTCPTFRNLASFHVNGEVATHVQFQYKKRGGAPRVKAGITVFEATNVKQTYPFQ

  • title: catalytic site
  • coordinates: C311,H494,N516
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_310480.1232 SGVSRSEEEI0.994unspLdBPK_310480.1232 SGVSRSEEEI0.994unspLdBPK_310480.1232 SGVSRSEEEI0.994unspLdBPK_310480.1544 SLVRRSCKPS0.997unspLdBPK_310480.1611 SLFTLSQKDR0.995unspLdBPK_310480.1619 SRRLRSPDDP0.998unspLdBPK_310480.1157 THGRTTVRKT0.996unspLdBPK_310480.1230 SVAGVSRSEE0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India