LdBPK_311130.1 | amidohydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_311130.1OTHER0.9998650.0000480.000087
No Results

  • Fasta :-

    >LdBPK_311130.1 MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIMGELQKMDAEGEWLHI SQPESNCVVADLKGGGGDGPIIALRADIDALPVEELTDVPFASKKQGVMHACGHDTHAAM LLGATRLLLEDAGRIKGTVRLLFQPAEEVPPGGAQMMIEKGCMEGVAMVFAEHIVPMKEG PTGTVLVRKGPVLSSSDTLHAEIIGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP SKCPIFTITTITSSSDSYNVIPDRVTLKGTLRTQDREVREDAKKAVAEVLHGICRSYGAT CNLSWLPGYDVTVNTDSAYDVGMRVLAQVLPSKDQVVELSACMSPSEDFSEFAKVAPANY VGIGCYNPEKGCTAVNHNAKFRVDEEAMKVGVKVHYGTIHELLMQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_311130.1.fa Sequence name : LdBPK_311130 Sequence length : 405 VALUES OF COMPUTED PARAMETERS Coef20 : 3.546 CoefTot : -0.111 ChDiff : -16 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.694 0.232 0.545 MesoH : -0.180 0.487 -0.229 0.265 MuHd_075 : 18.219 13.452 4.704 6.258 MuHd_095 : 35.024 19.817 8.295 6.032 MuHd_100 : 28.744 14.991 7.278 4.332 MuHd_105 : 24.005 15.730 7.692 4.378 Hmax_075 : -8.000 6.000 -2.549 2.840 Hmax_095 : -5.337 6.475 -2.733 1.417 Hmax_100 : -5.400 4.800 -2.737 1.080 Hmax_105 : -2.800 9.567 -0.721 2.147 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8854 0.1146 DFMC : 0.9420 0.0580
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 405 LdBPK_311130.1 MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIMGELQKMDAEGEWLHISQPESNCVVADLKGGGGDGP 80 IIALRADIDALPVEELTDVPFASKKQGVMHACGHDTHAAMLLGATRLLLEDAGRIKGTVRLLFQPAEEVPPGGAQMMIEK 160 GCMEGVAMVFAEHIVPMKEGPTGTVLVRKGPVLSSSDTLHAEIIGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP 240 SKCPIFTITTITSSSDSYNVIPDRVTLKGTLRTQDREVREDAKKAVAEVLHGICRSYGATCNLSWLPGYDVTVNTDSAYD 320 VGMRVLAQVLPSKDQVVELSACMSPSEDFSEFAKVAPANYVGIGCYNPEKGCTAVNHNAKFRVDEEAMKVGVKVHYGTIH 400 ELLMQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_311130.1 6 -MPAINR|EE 0.063 . LdBPK_311130.1 11 NREELDR|RV 0.178 . LdBPK_311130.1 12 REELDRR|VE 0.095 . LdBPK_311130.1 24 DQVVAWR|RY 0.087 . LdBPK_311130.1 25 QVVAWRR|YI 0.165 . LdBPK_311130.1 50 IMGELQK|MD 0.070 . LdBPK_311130.1 73 CVVADLK|GG 0.065 . LdBPK_311130.1 85 GPIIALR|AD 0.118 . LdBPK_311130.1 104 DVPFASK|KQ 0.057 . LdBPK_311130.1 105 VPFASKK|QG 0.089 . LdBPK_311130.1 126 MLLGATR|LL 0.067 . LdBPK_311130.1 134 LLEDAGR|IK 0.103 . LdBPK_311130.1 136 EDAGRIK|GT 0.071 . LdBPK_311130.1 140 RIKGTVR|LL 0.083 . LdBPK_311130.1 160 AQMMIEK|GC 0.075 . LdBPK_311130.1 178 EHIVPMK|EG 0.062 . LdBPK_311130.1 188 TGTVLVR|KG 0.067 . LdBPK_311130.1 189 GTVLVRK|GP 0.072 . LdBPK_311130.1 206 HAEIIGR|GG 0.109 . LdBPK_311130.1 236 LQQVVSR|RM 0.082 . LdBPK_311130.1 237 QQVVSRR|MP 0.131 . LdBPK_311130.1 242 RRMPPSK|CP 0.075 . LdBPK_311130.1 264 YNVIPDR|VT 0.081 . LdBPK_311130.1 268 PDRVTLK|GT 0.068 . LdBPK_311130.1 272 TLKGTLR|TQ 0.082 . LdBPK_311130.1 276 TLRTQDR|EV 0.119 . LdBPK_311130.1 279 TQDREVR|ED 0.195 . LdBPK_311130.1 283 EVREDAK|KA 0.072 . LdBPK_311130.1 284 VREDAKK|AV 0.191 . LdBPK_311130.1 295 VLHGICR|SY 0.160 . LdBPK_311130.1 324 AYDVGMR|VL 0.089 . LdBPK_311130.1 333 AQVLPSK|DQ 0.066 . LdBPK_311130.1 354 DFSEFAK|VA 0.079 . LdBPK_311130.1 370 GCYNPEK|GC 0.072 . LdBPK_311130.1 380 AVNHNAK|FR 0.086 . LdBPK_311130.1 382 NHNAKFR|VD 0.122 . LdBPK_311130.1 389 VDEEAMK|VG 0.056 . LdBPK_311130.1 393 AMKVGVK|VH 0.058 . ____________________________^_________________

  • Fasta :-

    >LdBPK_311130.1 ATGCCCGCCATCAACCGCGAGGAGCTCGACCGGCGTGTGGAGCAGATCTACGACCAGGTG GTTGCCTGGCGCCGCTACATCCACGAGAACCCGGACCTCTCGTTCGAGGAGCAGCCGACG GCGGCCTACATCATGGGTGAGCTGCAGAAGATGGACGCGGAGGGCGAATGGCTGCACATC AGCCAGCCTGAGAGCAACTGCGTTGTTGCTGACCTGAAGGGTGGCGGTGGCGACGGCCCG ATCATTGCGCTGCGTGCGGACATCGACGCGCTGCCTGTCGAGGAGCTGACAGACGTGCCG TTTGCGTCGAAGAAGCAGGGCGTGATGCACGCGTGCGGCCACGACACGCACGCGGCGATG CTGCTCGGCGCGACGAGGCTGCTGCTGGAGGATGCGGGGAGGATCAAGGGCACCGTGCGC CTGCTGTTTCAGCCTGCGGAGGAGGTGCCGCCGGGTGGCGCCCAGATGATGATCGAGAAG GGCTGCATGGAGGGCGTGGCGATGGTGTTTGCTGAGCACATTGTCCCGATGAAGGAGGGG CCTACGGGCACAGTTTTGGTGAGGAAGGGTCCGGTTCTCTCCAGCAGTGACACCCTACAC GCGGAAATAATCGGCCGCGGCGGGCATGCCTCGATGCCGGAGAGCTCCATCGACCCTATC GCGATCGCGTGCCTTGCCGTGACTGCCCTTCAGCAGGTGGTGTCGCGTCGCATGCCGCCA TCCAAGTGCCCAATCTTCACCATCACCACGATAACCTCGAGCTCTGACAGCTACAATGTG ATCCCTGACAGGGTGACGCTGAAGGGCACGCTGCGCACGCAGGATCGCGAGGTGCGGGAA GATGCCAAAAAGGCTGTCGCTGAGGTGCTTCACGGCATCTGCAGATCGTACGGTGCGACG TGCAACCTCAGCTGGCTTCCTGGCTACGATGTGACGGTGAACACGGACAGCGCGTACGAC GTGGGAATGCGAGTGCTTGCGCAGGTGCTCCCCTCGAAGGACCAGGTTGTGGAGCTTTCG GCTTGCATGTCTCCCTCCGAGGACTTCAGCGAGTTTGCGAAGGTGGCACCTGCGAACTAT GTGGGCATCGGGTGCTACAATCCTGAGAAGGGGTGCACTGCGGTGAACCACAACGCGAAG TTCCGCGTGGACGAGGAGGCGATGAAGGTCGGCGTGAAGGTCCACTATGGCACTATCCAC GAGCTGCTCATGCAGTGA
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  • Fasta :-

    MPAINREELDRRVEQIYDQVVAWRRYIHENPDLSFEEQPTAAYIMGELQKMDAEGEWLHI SQPESNCVVADLKGGGGDGPIIALRADIDALPVEELTDVPFASKKQGVMHACGHDTHAAM LLGATRLLLEDAGRIKGTVRLLFQPAEEVPPGGAQMMIEKGCMEGVAMVFAEHIVPMKEG PTGTVLVRKGPVLSSSDTLHAEIIGRGGHASMPESSIDPIAIACLAVTALQQVVSRRMPP SKCPIFTITTITSSSDSYNVIPDRVTLKGTLRTQDREVREDAKKAVAEVLHGICRSYGAT CNLSWLPGYDVTVNTDSAYDVGMRVLAQVLPSKDQVVELSACMSPSEDFSEFAKVAPANY VGIGCYNPEKGCTAVNHNAKFRVDEEAMKVGVKVHYGTIHELLMQ

  • title: metal binding site
  • coordinates: C112,H114,E147,E148,H173,N376
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_311130.1253 STTITSSSDS0.992unspLdBPK_311130.1253 STTITSSSDS0.992unspLdBPK_311130.1253 STTITSSSDS0.992unspLdBPK_311130.134 SNPDLSFEEQ0.997unspLdBPK_311130.1194 SGPVLSSSDT0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India