LdBPK_311840.1 | acetylornithine deacetylase-like protein

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_311840.1OTHER0.9712130.0190410.009746
No Results

  • Fasta :-

    >LdBPK_311840.1 MRVVTCNKGFCEWHLEMQRKVIRSSMALMSTSCNAIEYAAQIIAEICETALGITKSTVQE RNYSCPLACISTDAVMDGNAANTVPAECDVMCSVRRPLGHL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_311840.1.fa Sequence name : LdBPK_311840 Sequence length : 101 VALUES OF COMPUTED PARAMETERS Coef20 : 3.989 CoefTot : -0.362 ChDiff : -1 ZoneTo : 11 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.647 1.053 0.017 0.458 MesoH : -0.415 0.358 -0.223 0.169 MuHd_075 : 32.590 14.969 9.575 5.579 MuHd_095 : 10.277 7.793 3.531 0.973 MuHd_100 : 18.894 10.334 4.393 3.133 MuHd_105 : 26.034 12.470 5.040 5.060 Hmax_075 : 17.617 14.933 5.501 4.048 Hmax_095 : 3.762 4.900 -0.532 1.706 Hmax_100 : 5.800 5.600 -0.374 2.860 Hmax_105 : 10.267 8.900 0.265 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9477 0.0523 DFMC : 0.8916 0.1084
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 101 LdBPK_311840.1 MRVVTCNKGFCEWHLEMQRKVIRSSMALMSTSCNAIEYAAQIIAEICETALGITKSTVQERNYSCPLACISTDAVMDGNA 80 ANTVPAECDVMCSVRRPLGHL 160 ................................................................................ 80 ..................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_311840.1 2 -----MR|VV 0.107 . LdBPK_311840.1 8 RVVTCNK|GF 0.060 . LdBPK_311840.1 19 WHLEMQR|KV 0.084 . LdBPK_311840.1 20 HLEMQRK|VI 0.102 . LdBPK_311840.1 23 MQRKVIR|SS 0.185 . LdBPK_311840.1 55 TALGITK|ST 0.076 . LdBPK_311840.1 61 KSTVQER|NY 0.109 . LdBPK_311840.1 95 DVMCSVR|RP 0.073 . LdBPK_311840.1 96 VMCSVRR|PL 0.161 . ____________________________^_________________

  • Fasta :-

    >LdBPK_311840.1 ATGAGGGTGGTGACCTGCAACAAGGGCTTCTGTGAGTGGCACCTGGAGATGCAGCGCAAG GTGATTCGCTCCTCCATGGCGCTCATGAGCACGAGCTGTAACGCCATCGAGTACGCCGCG CAGATCATCGCGGAAATCTGTGAGACCGCGCTGGGCATCACGAAAAGCACTGTGCAGGAG AGGAACTATAGCTGCCCGCTCGCATGCATCTCCACGGATGCCGTCATGGATGGTAACGCG GCGAACACGGTACCGGCGGAGTGCGACGTCATGTGCAGCGTGCGCCGTCCGCTTGGGCAT CTCTGA
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  • Fasta :-

    MRVVTCNKGFCEWHLEMQRKVIRSSMALMSTSCNAIEYAAQIIAEICETALGITKSTVQE RNYSCPLACISTDAVMDGNAANTVPAECDVMCSVRRPLGHL

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India