LdBPK_321390.1 | PPPDE putative peptidase domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_321390.1OTHER0.9999650.0000260.000008
No Results

  • Fasta :-

    >LdBPK_321390.1 MTHTTVVTSPKLDPALYEKMQHTDPLPQSESVLLPSKTVLTPVRKSDKSRLPLCVDKGAS KENEEEEQKMGPLLRIATTEVPSRTGVMTPLSSRHLSVSCVPVEATTCANRPLAKAPQRL CIGRVAALRPPNDTSVPGAAVRDGQSFLLDRCKPTARDMVVELHVYDLSHGHLKRYGQEL VGLEMPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGSKYRTHNLGVTKKPVSEFFRWIG VRAIHVNQIHDYHPVRHNCHHFSHEAARFLLGESVSIPKYLFSTVDNLVKTEVGASVAEV MTLTTHGMQSSIARQMRSRTLERQCSIDMQLSASTACGVMTLPPTAAVLFRPSDLHLAKR LVLDLSPYVKGLIKRKHMKPAALAVLEGMACALMEGTDSLAPKLLLNYVEIVTESLLRSP LVTWGPIFNGLRVAVLHKLCLINCVFHTNLMSMLMLAARDFLRLLPDGRVAFLRLACNFA CGAYGAIVYSETRYRDAWVSIVGLGLMDSSSIVVYTAACLALNLALGIVTTSNLPLKRDM TQQADEHYALRLVTLLLYNLRHRSADQLPEPSFNMILMALYRLASSNTAALEYVVSHPFK PQYSELLDRCGSNESRALVCLLQTLEDLYA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_321390.1.fa Sequence name : LdBPK_321390 Sequence length : 630 VALUES OF COMPUTED PARAMETERS Coef20 : 3.628 CoefTot : -0.371 ChDiff : 12 ZoneTo : 12 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.735 2.141 0.380 0.711 MesoH : 0.290 0.984 -0.043 0.366 MuHd_075 : 19.634 19.577 5.447 4.180 MuHd_095 : 20.066 12.307 6.093 2.280 MuHd_100 : 20.524 12.903 6.324 2.498 MuHd_105 : 14.703 10.998 4.856 2.262 Hmax_075 : 9.800 10.500 0.162 3.281 Hmax_095 : 14.200 9.200 1.400 3.310 Hmax_100 : 14.200 9.200 1.400 3.310 Hmax_105 : 13.067 11.200 1.962 3.523 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9701 0.0299 DFMC : 0.9589 0.0411
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 630 LdBPK_321390.1 MTHTTVVTSPKLDPALYEKMQHTDPLPQSESVLLPSKTVLTPVRKSDKSRLPLCVDKGASKENEEEEQKMGPLLRIATTE 80 VPSRTGVMTPLSSRHLSVSCVPVEATTCANRPLAKAPQRLCIGRVAALRPPNDTSVPGAAVRDGQSFLLDRCKPTARDMV 160 VELHVYDLSHGHLKRYGQELVGLEMPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGSKYRTHNLGVTKKPVSEFFRWIG 240 VRAIHVNQIHDYHPVRHNCHHFSHEAARFLLGESVSIPKYLFSTVDNLVKTEVGASVAEVMTLTTHGMQSSIARQMRSRT 320 LERQCSIDMQLSASTACGVMTLPPTAAVLFRPSDLHLAKRLVLDLSPYVKGLIKRKHMKPAALAVLEGMACALMEGTDSL 400 APKLLLNYVEIVTESLLRSPLVTWGPIFNGLRVAVLHKLCLINCVFHTNLMSMLMLAARDFLRLLPDGRVAFLRLACNFA 480 CGAYGAIVYSETRYRDAWVSIVGLGLMDSSSIVVYTAACLALNLALGIVTTSNLPLKRDMTQQADEHYALRLVTLLLYNL 560 RHRSADQLPEPSFNMILMALYRLASSNTAALEYVVSHPFKPQYSELLDRCGSNESRALVCLLQTLEDLYA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_321390.1 11 TVVTSPK|LD 0.061 . LdBPK_321390.1 19 DPALYEK|MQ 0.061 . LdBPK_321390.1 37 SVLLPSK|TV 0.060 . LdBPK_321390.1 44 TVLTPVR|KS 0.090 . LdBPK_321390.1 45 VLTPVRK|SD 0.087 . LdBPK_321390.1 48 PVRKSDK|SR 0.067 . LdBPK_321390.1 50 RKSDKSR|LP 0.117 . LdBPK_321390.1 57 LPLCVDK|GA 0.086 . LdBPK_321390.1 61 VDKGASK|EN 0.065 . LdBPK_321390.1 69 NEEEEQK|MG 0.052 . LdBPK_321390.1 75 KMGPLLR|IA 0.126 . LdBPK_321390.1 84 TTEVPSR|TG 0.071 . LdBPK_321390.1 94 MTPLSSR|HL 0.084 . LdBPK_321390.1 111 ATTCANR|PL 0.078 . LdBPK_321390.1 115 ANRPLAK|AP 0.062 . LdBPK_321390.1 119 LAKAPQR|LC 0.084 . LdBPK_321390.1 124 QRLCIGR|VA 0.088 . LdBPK_321390.1 129 GRVAALR|PP 0.075 . LdBPK_321390.1 142 VPGAAVR|DG 0.091 . LdBPK_321390.1 151 QSFLLDR|CK 0.097 . LdBPK_321390.1 153 FLLDRCK|PT 0.062 . LdBPK_321390.1 157 RCKPTAR|DM 0.119 . LdBPK_321390.1 174 LSHGHLK|RY 0.091 . LdBPK_321390.1 175 SHGHLKR|YG 0.186 . LdBPK_321390.1 213 GIAAAGR|TR 0.077 . LdBPK_321390.1 215 AAAGRTR|FG 0.114 . LdBPK_321390.1 219 RTRFGSK|YR 0.073 . LdBPK_321390.1 221 RFGSKYR|TH 0.087 . LdBPK_321390.1 229 HNLGVTK|KP 0.059 . LdBPK_321390.1 230 NLGVTKK|PV 0.203 . LdBPK_321390.1 237 PVSEFFR|WI 0.136 . LdBPK_321390.1 242 FRWIGVR|AI 0.118 . LdBPK_321390.1 256 HDYHPVR|HN 0.115 . LdBPK_321390.1 268 FSHEAAR|FL 0.138 . LdBPK_321390.1 279 ESVSIPK|YL 0.066 . LdBPK_321390.1 290 TVDNLVK|TE 0.055 . LdBPK_321390.1 314 MQSSIAR|QM 0.097 . LdBPK_321390.1 317 SIARQMR|SR 0.474 . LdBPK_321390.1 319 ARQMRSR|TL 0.120 . LdBPK_321390.1 323 RSRTLER|QC 0.100 . LdBPK_321390.1 351 TAAVLFR|PS 0.117 . LdBPK_321390.1 359 SDLHLAK|RL 0.059 . LdBPK_321390.1 360 DLHLAKR|LV 0.192 . LdBPK_321390.1 370 DLSPYVK|GL 0.075 . LdBPK_321390.1 374 YVKGLIK|RK 0.056 . LdBPK_321390.1 375 VKGLIKR|KH 0.139 . LdBPK_321390.1 376 KGLIKRK|HM 0.082 . LdBPK_321390.1 379 IKRKHMK|PA 0.084 . LdBPK_321390.1 403 TDSLAPK|LL 0.081 . LdBPK_321390.1 418 VTESLLR|SP 0.073 . LdBPK_321390.1 432 PIFNGLR|VA 0.066 . LdBPK_321390.1 438 RVAVLHK|LC 0.055 . LdBPK_321390.1 459 MLMLAAR|DF 0.108 . LdBPK_321390.1 463 AARDFLR|LL 0.104 . LdBPK_321390.1 469 RLLPDGR|VA 0.076 . LdBPK_321390.1 474 GRVAFLR|LA 0.113 . LdBPK_321390.1 493 IVYSETR|YR 0.083 . LdBPK_321390.1 495 YSETRYR|DA 0.150 . LdBPK_321390.1 537 TSNLPLK|RD 0.074 . LdBPK_321390.1 538 SNLPLKR|DM 0.277 . LdBPK_321390.1 551 DEHYALR|LV 0.092 . LdBPK_321390.1 561 LLLYNLR|HR 0.075 . LdBPK_321390.1 563 LYNLRHR|SA 0.180 . LdBPK_321390.1 582 ILMALYR|LA 0.102 . LdBPK_321390.1 600 VVSHPFK|PQ 0.073 . LdBPK_321390.1 609 YSELLDR|CG 0.083 . LdBPK_321390.1 616 CGSNESR|AL 0.100 . ____________________________^_________________

  • Fasta :-

    >LdBPK_321390.1 ATGACGCACACGACGGTGGTCACGAGCCCCAAGTTGGATCCAGCCCTCTACGAGAAGATG CAGCACACAGACCCGCTGCCGCAGTCGGAAAGTGTGCTTCTGCCCTCCAAGACGGTCCTA ACTCCAGTGCGCAAGTCAGACAAAAGCCGGCTGCCCCTTTGCGTCGACAAGGGCGCCTCA AAGGAGAACGAGGAGGAGGAACAGAAGATGGGGCCGCTTCTGCGAATTGCGACGACAGAG GTGCCGTCGCGCACTGGCGTCATGACGCCACTGTCATCGCGGCATCTCTCGGTTTCCTGC GTCCCTGTGGAGGCGACGACCTGTGCAAATCGACCTCTGGCTAAAGCTCCCCAGAGACTC TGCATAGGTCGAGTAGCGGCGCTGCGTCCACCAAACGACACGTCGGTTCCCGGCGCCGCC GTGCGCGATGGCCAGAGCTTCTTGCTTGACAGATGCAAGCCTACCGCCAGAGACATGGTG GTGGAGCTGCACGTCTACGACCTCTCACATGGACATCTGAAGCGGTATGGGCAGGAGTTG GTTGGCCTAGAAATGCCCGGCGTCTATCACTCCGGCATTGTATGCTACGGGGTCGAGGTG TACTTTGAGGGCGGCATCGGCATCGCCGCGGCGGGCCGCACGCGTTTCGGTAGCAAGTAC CGCACGCACAACCTCGGCGTGACAAAGAAGCCTGTCTCAGAGTTCTTCCGGTGGATCGGT GTGCGGGCCATTCACGTTAATCAGATCCACGACTACCACCCGGTGCGGCACAACTGCCAT CACTTTTCCCACGAGGCAGCGCGGTTTTTGCTTGGCGAGAGCGTGTCCATTCCAAAGTAT CTCTTCAGCACCGTGGACAATCTTGTGAAGACAGAGGTTGGTGCTTCCGTTGCGGAGGTC ATGACTCTTACCACCCACGGCATGCAGAGTAGCATCGCGCGGCAGATGCGCTCCCGCACC TTGGAGCGGCAGTGTAGCATCGATATGCAACTCAGCGCCTCGACAGCCTGCGGTGTCATG ACACTGCCGCCGACGGCAGCAGTGCTCTTTCGTCCCAGCGACCTCCACCTTGCAAAACGG CTTGTCCTTGACCTCAGCCCGTACGTGAAGGGGCTAATCAAGAGAAAGCACATGAAGCCC GCTGCATTGGCGGTGCTGGAAGGGATGGCATGCGCGCTGATGGAGGGCACTGATTCCCTT GCGCCGAAGCTGCTGTTGAACTACGTGGAGATAGTCACGGAGTCTCTCTTGCGCAGCCCG TTGGTGACCTGGGGGCCTATCTTCAACGGGCTCCGAGTGGCAGTGCTACATAAGTTGTGC CTCATCAACTGTGTATTTCACACGAACCTGATGTCGATGCTGATGCTCGCGGCGCGCGAC TTTCTCCGCTTATTGCCCGACGGGCGCGTGGCGTTCCTTCGGCTAGCGTGCAACTTTGCC TGCGGCGCCTACGGCGCTATCGTCTACAGCGAAACTCGATACCGCGATGCCTGGGTGTCG ATCGTTGGCCTAGGCCTCATGGATAGCAGCAGTATTGTCGTGTACACAGCTGCGTGCCTG GCCTTGAACCTAGCGCTCGGCATTGTCACCACTTCAAATCTGCCCCTGAAGCGTGACATG ACGCAGCAGGCCGACGAACACTACGCGCTGCGGCTCGTGACGCTTCTGCTGTACAACCTA CGCCACCGCAGCGCAGATCAGCTGCCGGAGCCGTCCTTCAACATGATCTTGATGGCACTC TACCGGCTTGCCTCCAGCAACACAGCGGCGCTGGAGTACGTCGTGTCACACCCCTTCAAG CCACAGTACAGCGAGCTCCTCGACCGGTGTGGTTCGAACGAAAGCCGGGCCCTCGTGTGC CTCCTCCAAACCCTAGAAGATCTTTACGCATAA
  • Download Fasta

  • Fasta :-

    MTHTTVVTSPKLDPALYEKMQHTDPLPQSESVLLPSKTVLTPVRKSDKSRLPLCVDKGAS KENEEEEQKMGPLLRIATTEVPSRTGVMTPLSSRHLSVSCVPVEATTCANRPLAKAPQRL CIGRVAALRPPNDTSVPGAAVRDGQSFLLDRCKPTARDMVVELHVYDLSHGHLKRYGQEL VGLEMPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGSKYRTHNLGVTKKPVSEFFRWIG VRAIHVNQIHDYHPVRHNCHHFSHEAARFLLGESVSIPKYLFSTVDNLVKTEVGASVAEV MTLTTHGMQSSIARQMRSRTLERQCSIDMQLSASTACGVMTLPPTAAVLFRPSDLHLAKR LVLDLSPYVKGLIKRKHMKPAALAVLEGMACALMEGTDSLAPKLLLNYVEIVTESLLRSP LVTWGPIFNGLRVAVLHKLCLINCVFHTNLMSMLMLAARDFLRLLPDGRVAFLRLACNFA CGAYGAIVYSETRYRDAWVSIVGLGLMDSSSIVVYTAACLALNLALGIVTTSNLPLKRDM TQQADEHYALRLVTLLLYNLRHRSADQLPEPSFNMILMALYRLASSNTAALEYVVSHPFK PQYSELLDRCGSNESRALVCLLQTLEDLYA

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_321390.160 SDKGASKENE0.992unspLdBPK_321390.160 SDKGASKENE0.992unspLdBPK_321390.160 SDKGASKENE0.992unspLdBPK_321390.1218 STRFGSKYRT0.994unspLdBPK_321390.19 STVVTSPKLD0.996unspLdBPK_321390.146 SPVRKSDKSR0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India