LdBPK_332670.1 | metallo-peptidase, Clan MA(E) Family M32

_IDPredictionOTHERSPmTPCS_Position
LdBPK_332670.1OTHER0.9998480.0000440.000108
No Results

  • Fasta :-

    >LdBPK_332670.1 MEAYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEV KSLIESATKGSEELNAVQRANLREMRRAWKSATALPAEFVGRKMRLTTHAHSVWRDSRKA NDFAKFLPVLRDLVALAREEGSYLAAGTSLSPYEALMNEYEPGITTQKLDEVYANVKSWL PQLLKDIVQKQSGESVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK EDCRLTTNYIEDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFA EFQIGHATPFIDYLTTRLPEFFEAQPAFSQDNMRKSLQQVKPGYIRVDADEVCYPLHVIL RYEIERDLMEGKMEVEDVPRAWNAKMQEYLGLSTEGRDDVGCLQDVHWSMGALGYFPTYS LGAMYAAQIMASIRKELGDDKVDECLRTGELGPLLEKQQEKIWDHGCLYETDDLMTRATG ETLNPEYLRRHLEARYLNA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_332670.1.fa Sequence name : LdBPK_332670 Sequence length : 499 VALUES OF COMPUTED PARAMETERS Coef20 : 3.747 CoefTot : 0.000 ChDiff : -17 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.471 0.841 0.091 0.509 MesoH : -0.978 -0.030 -0.504 0.127 MuHd_075 : 9.263 4.178 2.214 0.987 MuHd_095 : 25.431 18.863 8.270 7.355 MuHd_100 : 32.968 25.049 9.976 9.139 MuHd_105 : 37.322 28.593 10.747 9.726 Hmax_075 : 0.933 5.483 -1.910 2.158 Hmax_095 : 3.900 12.300 0.320 4.780 Hmax_100 : 7.400 17.400 1.329 5.620 Hmax_105 : 15.900 19.600 3.289 6.780 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7554 0.2446 DFMC : 0.7936 0.2064
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 499 LdBPK_332670.1 MEAYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEVKSLIESATKGSEELNAVQRA 80 NLREMRRAWKSATALPAEFVGRKMRLTTHAHSVWRDSRKANDFAKFLPVLRDLVALAREEGSYLAAGTSLSPYEALMNEY 160 EPGITTQKLDEVYANVKSWLPQLLKDIVQKQSGESVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK 240 EDCRLTTNYIEDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFAEFQIGHATPFIDYLTTRLPE 320 FFEAQPAFSQDNMRKSLQQVKPGYIRVDADEVCYPLHVILRYEIERDLMEGKMEVEDVPRAWNAKMQEYLGLSTEGRDDV 400 GCLQDVHWSMGALGYFPTYSLGAMYAAQIMASIRKELGDDKVDECLRTGELGPLLEKQQEKIWDHGCLYETDDLMTRATG 480 ETLNPEYLRRHLEARYLNA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_332670.1 5 --MEAYK|KL 0.077 . LdBPK_332670.1 6 -MEAYKK|LE 0.071 . LdBPK_332670.1 13 LETIFTK|VY 0.056 . LdBPK_332670.1 16 IFTKVYR|LD 0.083 . LdBPK_332670.1 35 NTNMPPK|GE 0.073 . LdBPK_332670.1 40 PKGEESR|GE 0.091 . LdBPK_332670.1 51 AMLSELR|FG 0.074 . LdBPK_332670.1 61 ITAPEVK|SL 0.082 . LdBPK_332670.1 69 LIESATK|GS 0.061 . LdBPK_332670.1 79 ELNAVQR|AN 0.092 . LdBPK_332670.1 83 VQRANLR|EM 0.078 . LdBPK_332670.1 86 ANLREMR|RA 0.286 . LdBPK_332670.1 87 NLREMRR|AW 0.145 . LdBPK_332670.1 90 EMRRAWK|SA 0.288 . LdBPK_332670.1 102 PAEFVGR|KM 0.089 . LdBPK_332670.1 103 AEFVGRK|MR 0.067 . LdBPK_332670.1 105 FVGRKMR|LT 0.318 . LdBPK_332670.1 115 HAHSVWR|DS 0.168 . LdBPK_332670.1 118 SVWRDSR|KA 0.241 . LdBPK_332670.1 119 VWRDSRK|AN 0.101 . LdBPK_332670.1 125 KANDFAK|FL 0.085 . LdBPK_332670.1 131 KFLPVLR|DL 0.081 . LdBPK_332670.1 138 DLVALAR|EE 0.090 . LdBPK_332670.1 168 PGITTQK|LD 0.057 . LdBPK_332670.1 177 EVYANVK|SW 0.070 . LdBPK_332670.1 185 WLPQLLK|DI 0.074 . LdBPK_332670.1 190 LKDIVQK|QS 0.079 . LdBPK_332670.1 202 VIAFSQK|FP 0.082 . LdBPK_332670.1 207 QKFPQDK|QE 0.062 . LdBPK_332670.1 213 KQEALCK|EF 0.067 . LdBPK_332670.1 217 LCKEFMK|IW 0.068 . LdBPK_332670.1 227 FDTDAGR|LD 0.062 . LdBPK_332670.1 240 PFTGMTK|ED 0.056 . LdBPK_332670.1 244 MTKEDCR|LT 0.087 . LdBPK_332670.1 269 HESGHGK|YE 0.084 . LdBPK_332670.1 277 EQNCGPR|EH 0.092 . LdBPK_332670.1 288 QPVCNAR|SL 0.235 . LdBPK_332670.1 317 IDYLTTR|LP 0.098 . LdBPK_332670.1 334 FSQDNMR|KS 0.093 . LdBPK_332670.1 335 SQDNMRK|SL 0.158 . LdBPK_332670.1 341 KSLQQVK|PG 0.058 . LdBPK_332670.1 346 VKPGYIR|VD 0.070 . LdBPK_332670.1 361 PLHVILR|YE 0.088 . LdBPK_332670.1 366 LRYEIER|DL 0.134 . LdBPK_332670.1 372 RDLMEGK|ME 0.057 . LdBPK_332670.1 380 EVEDVPR|AW 0.096 . LdBPK_332670.1 385 PRAWNAK|MQ 0.084 . LdBPK_332670.1 397 GLSTEGR|DD 0.143 . LdBPK_332670.1 434 QIMASIR|KE 0.070 . LdBPK_332670.1 435 IMASIRK|EL 0.101 . LdBPK_332670.1 441 KELGDDK|VD 0.056 . LdBPK_332670.1 447 KVDECLR|TG 0.067 . LdBPK_332670.1 457 LGPLLEK|QQ 0.061 . LdBPK_332670.1 461 LEKQQEK|IW 0.073 . LdBPK_332670.1 477 TDDLMTR|AT 0.099 . LdBPK_332670.1 489 LNPEYLR|RH 0.067 . LdBPK_332670.1 490 NPEYLRR|HL 0.148 . LdBPK_332670.1 495 RRHLEAR|YL 0.185 . ____________________________^_________________

  • Fasta :-

    >LdBPK_332670.1 ATGGAGGCGTACAAGAAGCTGGAAACGATCTTTACGAAGGTCTACCGCCTGGACCACTTC CTCGGTCTGGGCAACTGGGACATGAACACAAACATGCCCCCCAAGGGCGAGGAATCACGC GGTGAGGCGATGGCGATGCTCTCGGAGCTCCGCTTTGGCTTCATCACGGCACCGGAGGTG AAAAGCCTGATTGAGAGTGCCACCAAGGGCAGCGAGGAGCTGAATGCGGTGCAGCGCGCT AACTTGCGGGAGATGAGGCGTGCGTGGAAGAGCGCCACCGCCTTGCCGGCTGAGTTTGTG GGCCGCAAGATGCGCCTCACGACACACGCGCACAGCGTGTGGCGCGACAGCCGCAAAGCA AATGACTTCGCCAAGTTCCTACCGGTGCTCAGGGACCTGGTGGCGCTCGCCCGTGAGGAG GGCTCCTACCTCGCCGCCGGCACCTCCCTCTCCCCGTATGAGGCGCTCATGAACGAGTAC GAGCCAGGAATCACGACACAAAAGCTGGATGAGGTGTACGCAAATGTAAAGTCGTGGCTG CCGCAGCTGCTAAAGGACATTGTGCAGAAGCAGTCCGGCGAGTCGGTGATTGCGTTCTCG CAGAAGTTCCCGCAGGACAAGCAGGAAGCACTGTGCAAGGAATTCATGAAGATCTGGCAC TTCGACACCGATGCCGGTCGCCTCGACGTCAGCCCCCACCCTTTCACGGGAATGACGAAG GAGGACTGCCGACTCACAACAAACTACATCGAAGACACGTTTGTTCAGAGCTTGTATGGC GTCATCCACGAGAGTGGGCATGGCAAGTACGAGCAGAACTGTGGCCCACGCGAGCACATC ACGCAGCCGGTGTGCAACGCCCGCTCTCTTGGCCTGCATGAGAGCCAGAGCCTCTTTGCG GAGTTTCAGATCGGCCACGCGACGCCCTTCATCGACTACCTCACAACTCGCCTTCCTGAG TTCTTCGAGGCGCAGCCAGCGTTCTCGCAGGACAACATGCGCAAGTCGCTGCAGCAGGTG AAGCCGGGCTACATTCGCGTCGATGCCGATGAGGTGTGCTACCCTCTGCACGTGATCCTG CGCTACGAGATCGAGCGCGACTTGATGGAGGGCAAAATGGAGGTGGAAGACGTGCCGCGC GCGTGGAACGCAAAGATGCAGGAGTACTTGGGTCTCTCAACGGAGGGCCGTGACGACGTT GGGTGCCTGCAGGACGTGCATTGGTCCATGGGTGCGCTCGGCTACTTTCCGACGTACTCG CTCGGCGCCATGTATGCGGCGCAGATCATGGCGAGCATCCGAAAGGAGCTGGGAGACGAC AAGGTGGATGAGTGCCTGCGCACCGGTGAGCTCGGCCCCCTGCTGGAAAAGCAGCAGGAG AAGATCTGGGATCATGGGTGCCTGTACGAGACGGACGACCTCATGACGCGTGCGACGGGC GAGACGCTGAACCCCGAGTACCTGCGCCGCCACCTGGAGGCGCGCTACCTAAACGCCTGA
  • Download Fasta

  • Fasta :-

    MEAYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEV KSLIESATKGSEELNAVQRANLREMRRAWKSATALPAEFVGRKMRLTTHAHSVWRDSRKA NDFAKFLPVLRDLVALAREEGSYLAAGTSLSPYEALMNEYEPGITTQKLDEVYANVKSWL PQLLKDIVQKQSGESVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK EDCRLTTNYIEDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFA EFQIGHATPFIDYLTTRLPEFFEAQPAFSQDNMRKSLQQVKPGYIRVDADEVCYPLHVIL RYEIERDLMEGKMEVEDVPRAWNAKMQEYLGLSTEGRDDVGCLQDVHWSMGALGYFPTYS LGAMYAAQIMASIRKELGDDKVDECLRTGELGPLLEKQQEKIWDHGCLYETDDLMTRATG ETLNPEYLRRHLEARYLNA

  • title: metal binding site
  • coordinates: H263,H267,E294
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_332670.1117 SVWRDSRKAN0.997unspLdBPK_332670.1151 SGTSLSPYEA0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India