LdBPK_343890.1 | ubiquitin hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
LdBPK_343890.1OTHER0.9658350.0011030.033062
No Results

  • Fasta :-

    >LdBPK_343890.1 MRSGYVGIYNQGSTCYLNSVIQALYHLPAFRTQIYNLPNVQKDSVALALRDVFAQLEVRN RNTTTTELTKAFGWSAQEAAVQHDVHELMQQLFDSLETTLKETPKKNMIRDMFGGLMIYR SRAIDGAEYLSDRLEDFYDVELVVQNKANIEESLREFSSGERIEGVCVEVMPGADATPHT IERSQHFLDCPKVLLVHPNRVAFDMETYELVTLRNVWSFDFNLSLASYVVDDASLKLDKE SQEKWKKLSHRTHLGANYSLRSILTHAGDATIGHYYVYVNFDGEWVRFNDEVVEPATEED VRKSAFGGQSIQSRYRLFDNERASLLIYVNDDVKEELLNETPPPSAIVEVGRHIEEERAR KEETHKVSYYLCDKFVVDVLDGVHGASDKLQRHMSVRLSPGQDEMTAIITTAAKELRVAP EQIRIFCRDRHGLSPWCAVESMCNSYDSYYYPPIFIDIAPPLAEEDAASATIAAAAAEPF LAFLRNVESPHDRDVPVTIVRSIPELQARVPRDAVVYESRGGPQYLNAITATNQLVCGAN LLYTHQRSSNDAVRGYLQQRQLVCTKVYLYDDYTAELTELFEINIVESTPYTTLQAGLYK MMTESKRGLPIPPSHNHLAFFKGNDRCNYAFAMPMAASLTIQWNTYNHTLRDVWGSVQHE HKIVMTILPMPLEKIDLTVLVTFNGGYNNLPHVYVPVEGGSVTFRELLELMVQQLGSRLR AGAAAGYEQQLTGQARLLRLLRVRRGELVEVVEDLDTPIDLEAREDIVLDKLCPALPGYE LVNVLFCRRRSGEYYFGLPTNICINSSLEEQGDVLLRRIVKKLGYPDQEEAMKKWILCVM NVKSRKTRTASKKEVLADLVKEVGGAPFVFVVDRPQCLLLDGIEEEEHRPESIVIKSASK TDLSAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_343890.1.fa Sequence name : LdBPK_343890 Sequence length : 906 VALUES OF COMPUTED PARAMETERS Coef20 : 3.699 CoefTot : -2.173 ChDiff : -29 ZoneTo : 42 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.312 1.500 0.124 0.595 MesoH : -0.283 0.360 -0.330 0.257 MuHd_075 : 24.790 18.459 7.747 6.361 MuHd_095 : 23.893 23.775 9.185 6.575 MuHd_100 : 22.156 23.008 7.222 6.280 MuHd_105 : 22.281 27.030 7.880 5.980 Hmax_075 : 12.700 15.200 2.585 6.240 Hmax_095 : 12.200 13.800 3.233 5.260 Hmax_100 : 14.500 17.700 2.991 5.740 Hmax_105 : 12.717 14.700 4.123 7.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6742 0.3258 DFMC : 0.6886 0.3114
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 906 LdBPK_343890.1 MRSGYVGIYNQGSTCYLNSVIQALYHLPAFRTQIYNLPNVQKDSVALALRDVFAQLEVRNRNTTTTELTKAFGWSAQEAA 80 VQHDVHELMQQLFDSLETTLKETPKKNMIRDMFGGLMIYRSRAIDGAEYLSDRLEDFYDVELVVQNKANIEESLREFSSG 160 ERIEGVCVEVMPGADATPHTIERSQHFLDCPKVLLVHPNRVAFDMETYELVTLRNVWSFDFNLSLASYVVDDASLKLDKE 240 SQEKWKKLSHRTHLGANYSLRSILTHAGDATIGHYYVYVNFDGEWVRFNDEVVEPATEEDVRKSAFGGQSIQSRYRLFDN 320 ERASLLIYVNDDVKEELLNETPPPSAIVEVGRHIEEERARKEETHKVSYYLCDKFVVDVLDGVHGASDKLQRHMSVRLSP 400 GQDEMTAIITTAAKELRVAPEQIRIFCRDRHGLSPWCAVESMCNSYDSYYYPPIFIDIAPPLAEEDAASATIAAAAAEPF 480 LAFLRNVESPHDRDVPVTIVRSIPELQARVPRDAVVYESRGGPQYLNAITATNQLVCGANLLYTHQRSSNDAVRGYLQQR 560 QLVCTKVYLYDDYTAELTELFEINIVESTPYTTLQAGLYKMMTESKRGLPIPPSHNHLAFFKGNDRCNYAFAMPMAASLT 640 IQWNTYNHTLRDVWGSVQHEHKIVMTILPMPLEKIDLTVLVTFNGGYNNLPHVYVPVEGGSVTFRELLELMVQQLGSRLR 720 AGAAAGYEQQLTGQARLLRLLRVRRGELVEVVEDLDTPIDLEAREDIVLDKLCPALPGYELVNVLFCRRRSGEYYFGLPT 800 NICINSSLEEQGDVLLRRIVKKLGYPDQEEAMKKWILCVMNVKSRKTRTASKKEVLADLVKEVGGAPFVFVVDRPQCLLL 880 DGIEEEEHRPESIVIKSASKTDLSAA 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...............................P................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ...............................................P................................ 880 .......................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ LdBPK_343890.1 2 -----MR|SG 0.135 . LdBPK_343890.1 31 YHLPAFR|TQ 0.077 . LdBPK_343890.1 42 NLPNVQK|DS 0.063 . LdBPK_343890.1 50 SVALALR|DV 0.194 . LdBPK_343890.1 59 FAQLEVR|NR 0.069 . LdBPK_343890.1 61 QLEVRNR|NT 0.101 . LdBPK_343890.1 70 TTTELTK|AF 0.066 . LdBPK_343890.1 101 SLETTLK|ET 0.060 . LdBPK_343890.1 105 TLKETPK|KN 0.067 . LdBPK_343890.1 106 LKETPKK|NM 0.098 . LdBPK_343890.1 110 PKKNMIR|DM 0.153 . LdBPK_343890.1 120 GGLMIYR|SR 0.091 . LdBPK_343890.1 122 LMIYRSR|AI 0.120 . LdBPK_343890.1 133 AEYLSDR|LE 0.071 . LdBPK_343890.1 147 ELVVQNK|AN 0.062 . LdBPK_343890.1 155 NIEESLR|EF 0.096 . LdBPK_343890.1 162 EFSSGER|IE 0.081 . LdBPK_343890.1 183 TPHTIER|SQ 0.126 . LdBPK_343890.1 192 HFLDCPK|VL 0.056 . LdBPK_343890.1 200 LLVHPNR|VA 0.126 . LdBPK_343890.1 214 YELVTLR|NV 0.095 . LdBPK_343890.1 236 VDDASLK|LD 0.054 . LdBPK_343890.1 239 ASLKLDK|ES 0.057 . LdBPK_343890.1 244 DKESQEK|WK 0.059 . LdBPK_343890.1 246 ESQEKWK|KL 0.079 . LdBPK_343890.1 247 SQEKWKK|LS 0.087 . LdBPK_343890.1 251 WKKLSHR|TH 0.096 . LdBPK_343890.1 261 GANYSLR|SI 0.174 . LdBPK_343890.1 287 FDGEWVR|FN 0.102 . LdBPK_343890.1 302 ATEEDVR|KS 0.084 . LdBPK_343890.1 303 TEEDVRK|SA 0.236 . LdBPK_343890.1 314 GQSIQSR|YR 0.088 . LdBPK_343890.1 316 SIQSRYR|LF 0.100 . LdBPK_343890.1 322 RLFDNER|AS 0.069 . LdBPK_343890.1 334 YVNDDVK|EE 0.053 . LdBPK_343890.1 352 AIVEVGR|HI 0.124 . LdBPK_343890.1 358 RHIEEER|AR 0.085 . LdBPK_343890.1 360 IEEERAR|KE 0.093 . LdBPK_343890.1 361 EEERARK|EE 0.150 . LdBPK_343890.1 366 RKEETHK|VS 0.059 . LdBPK_343890.1 374 SYYLCDK|FV 0.085 . LdBPK_343890.1 389 VHGASDK|LQ 0.059 . LdBPK_343890.1 392 ASDKLQR|HM 0.097 . LdBPK_343890.1 397 QRHMSVR|LS 0.129 . LdBPK_343890.1 414 IITTAAK|EL 0.066 . LdBPK_343890.1 417 TAAKELR|VA 0.125 . LdBPK_343890.1 424 VAPEQIR|IF 0.079 . LdBPK_343890.1 428 QIRIFCR|DR 0.120 . LdBPK_343890.1 430 RIFCRDR|HG 0.067 . LdBPK_343890.1 485 PFLAFLR|NV 0.083 . LdBPK_343890.1 493 VESPHDR|DV 0.171 . LdBPK_343890.1 501 VPVTIVR|SI 0.120 . LdBPK_343890.1 509 IPELQAR|VP 0.101 . LdBPK_343890.1 512 LQARVPR|DA 0.561 *ProP* LdBPK_343890.1 520 AVVYESR|GG 0.093 . LdBPK_343890.1 547 LLYTHQR|SS 0.210 . LdBPK_343890.1 554 SSNDAVR|GY 0.124 . LdBPK_343890.1 560 RGYLQQR|QL 0.077 . LdBPK_343890.1 566 RQLVCTK|VY 0.055 . LdBPK_343890.1 600 LQAGLYK|MM 0.068 . LdBPK_343890.1 606 KMMTESK|RG 0.061 . LdBPK_343890.1 607 MMTESKR|GL 0.151 . LdBPK_343890.1 622 NHLAFFK|GN 0.070 . LdBPK_343890.1 626 FFKGNDR|CN 0.070 . LdBPK_343890.1 651 TYNHTLR|DV 0.262 . LdBPK_343890.1 662 SVQHEHK|IV 0.120 . LdBPK_343890.1 674 LPMPLEK|ID 0.072 . LdBPK_343890.1 705 GGSVTFR|EL 0.108 . LdBPK_343890.1 718 VQQLGSR|LR 0.065 . LdBPK_343890.1 720 QLGSRLR|AG 0.091 . LdBPK_343890.1 736 QLTGQAR|LL 0.084 . LdBPK_343890.1 739 GQARLLR|LL 0.184 . LdBPK_343890.1 742 RLLRLLR|VR 0.156 . LdBPK_343890.1 744 LRLLRVR|RG 0.088 . LdBPK_343890.1 745 RLLRVRR|GE 0.279 . LdBPK_343890.1 764 PIDLEAR|ED 0.070 . LdBPK_343890.1 771 EDIVLDK|LC 0.059 . LdBPK_343890.1 788 VNVLFCR|RR 0.081 . LdBPK_343890.1 789 NVLFCRR|RS 0.108 . LdBPK_343890.1 790 VLFCRRR|SG 0.191 . LdBPK_343890.1 817 QGDVLLR|RI 0.084 . LdBPK_343890.1 818 GDVLLRR|IV 0.183 . LdBPK_343890.1 821 LLRRIVK|KL 0.131 . LdBPK_343890.1 822 LRRIVKK|LG 0.120 . LdBPK_343890.1 833 DQEEAMK|KW 0.062 . LdBPK_343890.1 834 QEEAMKK|WI 0.116 . LdBPK_343890.1 843 LCVMNVK|SR 0.065 . LdBPK_343890.1 845 VMNVKSR|KT 0.105 . LdBPK_343890.1 846 MNVKSRK|TR 0.093 . LdBPK_343890.1 848 VKSRKTR|TA 0.680 *ProP* LdBPK_343890.1 852 KTRTASK|KE 0.055 . LdBPK_343890.1 853 TRTASKK|EV 0.176 . LdBPK_343890.1 861 VLADLVK|EV 0.083 . LdBPK_343890.1 874 FVFVVDR|PQ 0.089 . LdBPK_343890.1 889 IEEEEHR|PE 0.093 . LdBPK_343890.1 896 PESIVIK|SA 0.134 . LdBPK_343890.1 900 VIKSASK|TD 0.053 . ____________________________^_________________

  • Fasta :-

    >LdBPK_343890.1 ATGCGCTCGGGGTACGTTGGGATCTACAATCAAGGTAGCACGTGCTACCTGAACTCGGTC ATACAGGCGTTGTACCACCTACCCGCCTTCCGTACGCAAATTTATAACCTCCCGAATGTG CAAAAAGACTCCGTCGCACTCGCTCTGCGGGACGTGTTTGCGCAGCTGGAGGTGCGCAAC CGCAACACCACCACGACGGAGCTGACCAAGGCTTTTGGCTGGTCGGCGCAGGAGGCGGCA GTGCAGCATGACGTTCATGAGTTGATGCAGCAGCTCTTTGACAGCCTCGAAACGACGCTG AAGGAGACGCCGAAGAAGAACATGATCCGTGACATGTTTGGCGGCTTGATGATCTACCGG TCTCGTGCCATAGACGGCGCCGAATACCTCTCTGACCGCCTCGAGGATTTCTACGACGTG GAGCTGGTAGTGCAGAACAAAGCAAACATCGAGGAGTCACTGCGGGAGTTCTCATCCGGA GAGCGGATCGAAGGTGTCTGTGTGGAGGTGATGCCTGGTGCGGACGCGACGCCGCACACG ATTGAGCGCAGTCAGCACTTCCTCGACTGCCCCAAGGTGCTCTTGGTACACCCGAACCGC GTGGCGTTTGACATGGAAACATACGAGCTGGTCACGCTACGTAATGTGTGGAGTTTTGAT TTCAACTTATCGCTGGCGAGCTACGTTGTCGATGACGCCTCGCTGAAGCTCGACAAGGAG AGTCAGGAAAAATGGAAGAAGCTCAGTCACCGCACCCACCTCGGCGCGAACTACAGCCTG CGCTCCATCCTCACGCACGCCGGCGATGCCACCATCGGGCACTACTATGTGTACGTCAAC TTCGACGGGGAGTGGGTGCGCTTCAACGACGAGGTGGTCGAGCCGGCAACGGAGGAGGAT GTGCGCAAGTCCGCGTTTGGCGGGCAGTCGATTCAGTCGCGCTACCGTCTCTTCGACAAC GAGCGCGCGTCGCTGCTTATCTACGTGAACGACGATGTCAAGGAGGAATTGTTGAACGAG ACGCCGCCACCGAGCGCGATCGTGGAGGTGGGCCGCCACATTGAGGAAGAGCGCGCTAGG AAGGAGGAGACGCACAAGGTGAGCTACTACCTATGCGACAAGTTCGTGGTGGACGTGCTC GACGGCGTGCACGGCGCCTCCGACAAGCTGCAGCGTCACATGTCTGTGCGCCTCTCGCCC GGTCAAGATGAGATGACCGCCATCATCACTACTGCAGCGAAGGAGCTGCGCGTAGCGCCA GAGCAGATTCGCATCTTCTGCCGCGACCGTCACGGCCTCTCCCCATGGTGTGCTGTTGAG TCGATGTGCAACTCGTACGACTCATACTATTATCCGCCCATTTTTATCGACATCGCGCCG CCGCTCGCGGAAGAGGATGCGGCGTCCGCCACGATTGCCGCTGCCGCCGCCGAGCCGTTC CTCGCGTTCCTCCGTAATGTCGAATCGCCGCACGACCGCGACGTCCCCGTCACGATCGTC CGCTCCATCCCGGAGCTGCAAGCGCGAGTGCCGCGCGATGCGGTCGTGTACGAAAGCCGC GGCGGCCCGCAGTACCTGAACGCCATCACAGCGACGAACCAACTCGTCTGCGGCGCAAAC TTACTTTATACGCACCAGCGCTCCTCCAACGACGCGGTGCGCGGGTACCTTCAGCAGCGC CAGCTCGTCTGCACAAAGGTCTACCTGTACGACGACTACACCGCCGAGTTGACGGAGCTC TTTGAAATAAATATTGTCGAATCCACGCCCTACACCACGCTGCAGGCCGGGCTGTACAAG ATGATGACAGAGTCGAAGAGGGGCCTGCCGATCCCTCCCTCCCACAACCACCTCGCGTTC TTCAAGGGAAACGACAGATGCAACTACGCCTTCGCAATGCCCATGGCGGCGTCGCTCACG ATTCAGTGGAACACGTACAACCACACCCTCCGAGATGTGTGGGGTAGCGTGCAGCACGAG CACAAAATTGTCATGACAATTCTTCCAATGCCGCTCGAAAAGATCGACTTGACGGTGCTG GTGACGTTCAACGGAGGATACAATAACTTGCCGCACGTGTACGTCCCAGTGGAGGGTGGC AGCGTTACTTTTCGCGAACTTCTTGAGTTGATGGTGCAGCAGTTGGGCAGTCGTCTTCGG GCAGGCGCTGCCGCGGGGTACGAGCAGCAGCTCACCGGGCAGGCACGGCTGCTGCGGCTG CTGCGGGTCCGACGAGGCGAGCTGGTTGAGGTGGTGGAGGACCTGGACACTCCGATTGAT CTCGAGGCACGCGAGGACATTGTCCTGGACAAGCTGTGCCCGGCACTGCCCGGGTACGAG CTCGTCAACGTGCTCTTCTGCCGCCGCCGCTCAGGAGAGTACTACTTTGGTCTACCGACA AACATCTGCATCAACTCGTCTCTCGAGGAGCAGGGCGATGTGCTTCTTCGACGCATCGTA AAGAAGCTCGGGTACCCTGACCAGGAGGAGGCAATGAAGAAGTGGATACTTTGTGTAATG AACGTCAAGTCCCGCAAGACGCGCACTGCCAGCAAGAAGGAGGTGCTGGCAGATCTCGTC AAGGAGGTCGGCGGCGCACCGTTCGTGTTCGTTGTCGACCGTCCCCAGTGCTTGCTCCTC GACGGCATTGAAGAGGAGGAGCACCGGCCAGAGTCCATCGTTATCAAGTCTGCCTCGAAG ACAGACCTCTCCGCGGCTTAG
  • Download Fasta

  • Fasta :-

    MRSGYVGIYNQGSTCYLNSVIQALYHLPAFRTQIYNLPNVQKDSVALALRDVFAQLEVRN RNTTTTELTKAFGWSAQEAAVQHDVHELMQQLFDSLETTLKETPKKNMIRDMFGGLMIYR SRAIDGAEYLSDRLEDFYDVELVVQNKANIEESLREFSSGERIEGVCVEVMPGADATPHT IERSQHFLDCPKVLLVHPNRVAFDMETYELVTLRNVWSFDFNLSLASYVVDDASLKLDKE SQEKWKKLSHRTHLGANYSLRSILTHAGDATIGHYYVYVNFDGEWVRFNDEVVEPATEED VRKSAFGGQSIQSRYRLFDNERASLLIYVNDDVKEELLNETPPPSAIVEVGRHIEEERAR KEETHKVSYYLCDKFVVDVLDGVHGASDKLQRHMSVRLSPGQDEMTAIITTAAKELRVAP EQIRIFCRDRHGLSPWCAVESMCNSYDSYYYPPIFIDIAPPLAEEDAASATIAAAAAEPF LAFLRNVESPHDRDVPVTIVRSIPELQARVPRDAVVYESRGGPQYLNAITATNQLVCGAN LLYTHQRSSNDAVRGYLQQRQLVCTKVYLYDDYTAELTELFEINIVESTPYTTLQAGLYK MMTESKRGLPIPPSHNHLAFFKGNDRCNYAFAMPMAASLTIQWNTYNHTLRDVWGSVQHE HKIVMTILPMPLEKIDLTVLVTFNGGYNNLPHVYVPVEGGSVTFRELLELMVQQLGSRLR AGAAAGYEQQLTGQARLLRLLRVRRGELVEVVEDLDTPIDLEAREDIVLDKLCPALPGYE LVNVLFCRRRSGEYYFGLPTNICINSSLEEQGDVLLRRIVKKLGYPDQEEAMKKWILCVM NVKSRKTRTASKKEVLADLVKEVGGAPFVFVVDRPQCLLLDGIEEEEHRPESIVIKSASK TDLSAA

  • title: Active Site
  • coordinates: N10,C15,H274,D290
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_343890.1399 SSVRLSPGQD0.997unspLdBPK_343890.1399 SSVRLSPGQD0.997unspLdBPK_343890.1399 SSVRLSPGQD0.997unspLdBPK_343890.1791 SCRRRSGEYY0.997unspLdBPK_343890.1851 STRTASKKEV0.997unspLdBPK_343890.1899 SIKSASKTDL0.99unspLdBPK_343890.199 TSLETTLKET0.991unspLdBPK_343890.1241 SLDKESQEKW0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India