LdBPK_351400.1 | Zn-finger in Ran binding protein and others/OTU-like cysteine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0051286      

  • Curated_GO_Components:  cell tip      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_351400.1OTHER0.9999860.0000010.000013
No Results

  • Fasta :-

    >LdBPK_351400.1 MEYLDNLLNRKIERERLGAGGADASSSSAASAAGTSSKHVDGHGATGDRQLKSAALRLCW LCNRTSPLRFRLQGGIHLCFTCFRASYLSLLLPIINTPARRASDARFLKLIGSIENERAG SVSSPTDELLASMYGEVIEPQQASFVMSSSMMRLRREEEEQRLLSATRRPRSGGAASSAK SVKSFWNCPLCTFLNAAVARECEACGFVNPGEVTCPVCKARCSLGMIGTPLSEENPASRC KTGEPHCIWNCRECGGLNTLDGDRCTSCRQPRYWACSQCTALHHMARGEDGLRYCPTCGA YNTPDDILVGQAKIDKETRYAGMVTAQQSAAQRRKSGSKDHDHNRGGSRAAAGGAAAAKA DDQIVFGVNDAHTLEELERQKQIENNEKRLLSRLNRLHISRNLQKTDGNCLFRALANQLF GQPRLHYLVRSLATAYMSEHSEDYAILFDGPAEWKKYLTAMKEQGTWGDELCLNAAARCF RVNIHVITSDQERWHIVFQHDQLGRTRTVRSDEDARTNNMAQTLTSYEGVSLFLAYLSPV HYDDITPLPVAHLQLGELLSGELNKRMKRNQTTHSPSDSGSSTSALASAGPSSGGRWADA SNFSHLPSRPLLADPAKPRTRSSDDLVKSCLESPTVSNATAPPVPRSRPHSCKPDTYKSS EPPSRPPPTSPTSLPSEYTC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_351400.1.fa Sequence name : LdBPK_351400 Sequence length : 680 VALUES OF COMPUTED PARAMETERS Coef20 : 3.600 CoefTot : 0.000 ChDiff : 11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 1.582 0.309 0.486 MesoH : -0.441 0.308 -0.224 0.150 MuHd_075 : 39.517 23.812 10.596 9.616 MuHd_095 : 28.701 19.997 7.748 6.061 MuHd_100 : 27.333 17.772 7.050 5.699 MuHd_105 : 24.703 17.617 6.339 5.206 Hmax_075 : 3.600 10.700 0.172 4.700 Hmax_095 : -6.200 7.200 -2.984 2.720 Hmax_100 : -3.900 6.200 -2.925 2.480 Hmax_105 : -8.300 4.500 -3.580 0.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8607 0.1393 DFMC : 0.9382 0.0618
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 680 LdBPK_351400.1 MEYLDNLLNRKIERERLGAGGADASSSSAASAAGTSSKHVDGHGATGDRQLKSAALRLCWLCNRTSPLRFRLQGGIHLCF 80 TCFRASYLSLLLPIINTPARRASDARFLKLIGSIENERAGSVSSPTDELLASMYGEVIEPQQASFVMSSSMMRLRREEEE 160 QRLLSATRRPRSGGAASSAKSVKSFWNCPLCTFLNAAVARECEACGFVNPGEVTCPVCKARCSLGMIGTPLSEENPASRC 240 KTGEPHCIWNCRECGGLNTLDGDRCTSCRQPRYWACSQCTALHHMARGEDGLRYCPTCGAYNTPDDILVGQAKIDKETRY 320 AGMVTAQQSAAQRRKSGSKDHDHNRGGSRAAAGGAAAAKADDQIVFGVNDAHTLEELERQKQIENNEKRLLSRLNRLHIS 400 RNLQKTDGNCLFRALANQLFGQPRLHYLVRSLATAYMSEHSEDYAILFDGPAEWKKYLTAMKEQGTWGDELCLNAAARCF 480 RVNIHVITSDQERWHIVFQHDQLGRTRTVRSDEDARTNNMAQTLTSYEGVSLFLAYLSPVHYDDITPLPVAHLQLGELLS 560 GELNKRMKRNQTTHSPSDSGSSTSALASAGPSSGGRWADASNFSHLPSRPLLADPAKPRTRSSDDLVKSCLESPTVSNAT 640 APPVPRSRPHSCKPDTYKSSEPPSRPPPTSPTSLPSEYTC 720 ................................................................................ 80 ...........................................................................P.... 160 ................................................................................ 240 ...............................P................................................ 320 ................................................................................ 400 ................................................................................ 480 .............................P.................................................. 560 ................................................................................ 640 ........................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 3 Name Pos Context Score Pred ____________________________v_________________ LdBPK_351400.1 10 LDNLLNR|KI 0.128 . LdBPK_351400.1 11 DNLLNRK|IE 0.066 . LdBPK_351400.1 14 LNRKIER|ER 0.091 . LdBPK_351400.1 16 RKIERER|LG 0.082 . LdBPK_351400.1 38 AAGTSSK|HV 0.113 . LdBPK_351400.1 49 HGATGDR|QL 0.076 . LdBPK_351400.1 52 TGDRQLK|SA 0.176 . LdBPK_351400.1 57 LKSAALR|LC 0.098 . LdBPK_351400.1 64 LCWLCNR|TS 0.062 . LdBPK_351400.1 69 NRTSPLR|FR 0.091 . LdBPK_351400.1 71 TSPLRFR|LQ 0.108 . LdBPK_351400.1 84 LCFTCFR|AS 0.082 . LdBPK_351400.1 100 IINTPAR|RA 0.153 . LdBPK_351400.1 101 INTPARR|AS 0.139 . LdBPK_351400.1 106 RRASDAR|FL 0.147 . LdBPK_351400.1 109 SDARFLK|LI 0.219 . LdBPK_351400.1 118 GSIENER|AG 0.082 . LdBPK_351400.1 153 MSSSMMR|LR 0.106 . LdBPK_351400.1 155 SSMMRLR|RE 0.104 . LdBPK_351400.1 156 SMMRLRR|EE 0.553 *ProP* LdBPK_351400.1 162 REEEEQR|LL 0.081 . LdBPK_351400.1 168 RLLSATR|RP 0.080 . LdBPK_351400.1 169 LLSATRR|PR 0.206 . LdBPK_351400.1 171 SATRRPR|SG 0.455 . LdBPK_351400.1 180 GAASSAK|SV 0.123 . LdBPK_351400.1 183 SSAKSVK|SF 0.103 . LdBPK_351400.1 200 LNAAVAR|EC 0.163 . LdBPK_351400.1 219 VTCPVCK|AR 0.061 . LdBPK_351400.1 221 CPVCKAR|CS 0.134 . LdBPK_351400.1 239 EENPASR|CK 0.100 . LdBPK_351400.1 241 NPASRCK|TG 0.069 . LdBPK_351400.1 252 HCIWNCR|EC 0.103 . LdBPK_351400.1 264 NTLDGDR|CT 0.072 . LdBPK_351400.1 269 DRCTSCR|QP 0.088 . LdBPK_351400.1 272 TSCRQPR|YW 0.513 *ProP* LdBPK_351400.1 287 ALHHMAR|GE 0.130 . LdBPK_351400.1 293 RGEDGLR|YC 0.073 . LdBPK_351400.1 313 ILVGQAK|ID 0.063 . LdBPK_351400.1 316 GQAKIDK|ET 0.070 . LdBPK_351400.1 319 KIDKETR|YA 0.163 . LdBPK_351400.1 333 QQSAAQR|RK 0.108 . LdBPK_351400.1 334 QSAAQRR|KS 0.252 . LdBPK_351400.1 335 SAAQRRK|SG 0.154 . LdBPK_351400.1 339 RRKSGSK|DH 0.088 . LdBPK_351400.1 345 KDHDHNR|GG 0.124 . LdBPK_351400.1 349 HNRGGSR|AA 0.128 . LdBPK_351400.1 359 GGAAAAK|AD 0.091 . LdBPK_351400.1 379 TLEELER|QK 0.087 . LdBPK_351400.1 381 EELERQK|QI 0.065 . LdBPK_351400.1 388 QIENNEK|RL 0.058 . LdBPK_351400.1 389 IENNEKR|LL 0.199 . LdBPK_351400.1 393 EKRLLSR|LN 0.077 . LdBPK_351400.1 396 LLSRLNR|LH 0.180 . LdBPK_351400.1 401 NRLHISR|NL 0.088 . LdBPK_351400.1 405 ISRNLQK|TD 0.074 . LdBPK_351400.1 413 DGNCLFR|AL 0.111 . LdBPK_351400.1 424 QLFGQPR|LH 0.084 . LdBPK_351400.1 430 RLHYLVR|SL 0.209 . LdBPK_351400.1 455 DGPAEWK|KY 0.058 . LdBPK_351400.1 456 GPAEWKK|YL 0.155 . LdBPK_351400.1 462 KYLTAMK|EQ 0.069 . LdBPK_351400.1 478 CLNAAAR|CF 0.120 . LdBPK_351400.1 481 AAARCFR|VN 0.272 . LdBPK_351400.1 493 ITSDQER|WH 0.109 . LdBPK_351400.1 505 QHDQLGR|TR 0.065 . LdBPK_351400.1 507 DQLGRTR|TV 0.105 . LdBPK_351400.1 510 GRTRTVR|SD 0.571 *ProP* LdBPK_351400.1 516 RSDEDAR|TN 0.085 . LdBPK_351400.1 565 LSGELNK|RM 0.066 . LdBPK_351400.1 566 SGELNKR|MK 0.162 . LdBPK_351400.1 568 ELNKRMK|RN 0.063 . LdBPK_351400.1 569 LNKRMKR|NQ 0.459 . LdBPK_351400.1 596 GPSSGGR|WA 0.201 . LdBPK_351400.1 609 FSHLPSR|PL 0.085 . LdBPK_351400.1 617 LLADPAK|PR 0.068 . LdBPK_351400.1 619 ADPAKPR|TR 0.079 . LdBPK_351400.1 621 PAKPRTR|SS 0.164 . LdBPK_351400.1 628 SSDDLVK|SC 0.072 . LdBPK_351400.1 646 TAPPVPR|SR 0.108 . LdBPK_351400.1 648 PPVPRSR|PH 0.106 . LdBPK_351400.1 653 SRPHSCK|PD 0.070 . LdBPK_351400.1 658 CKPDTYK|SS 0.079 . LdBPK_351400.1 665 SSEPPSR|PP 0.097 . ____________________________^_________________

  • Fasta :-

    >LdBPK_351400.1 ATGGAGTACCTAGATAATCTCTTGAACAGGAAGATCGAGCGGGAGCGGCTCGGCGCGGGC GGTGCTGACGCGTCTTCATCGTCTGCGGCTTCAGCGGCCGGAACTAGCAGCAAGCATGTT GATGGACACGGCGCTACCGGAGATAGGCAGCTCAAGTCTGCGGCACTGCGACTGTGTTGG CTCTGCAACCGAACAAGTCCCTTGCGCTTCCGTTTACAAGGAGGCATCCACCTCTGCTTT ACGTGCTTCCGGGCCTCGTACTTGTCGCTGCTCCTCCCCATCATCAACACACCTGCCAGA CGCGCGAGTGACGCGAGATTCTTGAAGCTGATCGGCAGCATTGAAAACGAAAGGGCGGGG TCCGTGTCGTCTCCAACTGATGAGCTACTCGCCAGCATGTACGGTGAGGTAATTGAGCCA CAGCAGGCATCGTTCGTAATGAGCTCGTCCATGATGCGGCTGCGGCGGGAGGAGGAGGAG CAGCGCCTACTGTCGGCCACGCGGCGCCCTCGCAGTGGTGGTGCCGCCAGCTCCGCGAAG AGCGTTAAATCCTTTTGGAATTGCCCCCTGTGTACCTTCCTGAACGCGGCCGTCGCGCGC GAGTGCGAGGCGTGCGGGTTCGTCAATCCTGGCGAGGTCACCTGCCCCGTCTGCAAGGCT CGCTGCTCCCTCGGCATGATAGGCACACCGTTGTCCGAGGAGAACCCCGCCAGCAGGTGC AAGACCGGCGAGCCGCATTGCATCTGGAACTGCCGCGAGTGCGGCGGGCTTAACACCCTC GACGGTGACCGTTGCACGTCGTGCCGCCAGCCGCGCTACTGGGCATGCTCGCAGTGCACG GCACTGCACCACATGGCGCGCGGCGAGGATGGCTTGCGCTACTGTCCCACCTGCGGCGCG TACAACACCCCGGATGACATCTTGGTTGGCCAGGCAAAGATCGACAAGGAGACCAGGTAT GCGGGTATGGTGACGGCGCAGCAGAGTGCGGCGCAGCGGCGCAAGAGCGGCAGCAAGGAC CATGACCACAACCGCGGTGGCTCACGGGCTGCAGCAGGCGGTGCTGCCGCGGCGAAAGCC GACGACCAAATCGTCTTTGGCGTTAACGACGCCCATACGCTGGAGGAGCTGGAGCGGCAG AAGCAAATCGAAAACAATGAAAAACGGCTGCTTTCCCGCCTGAACCGGCTGCACATTTCC CGCAACCTGCAGAAGACGGACGGCAACTGCCTCTTCCGGGCTCTGGCGAACCAGCTCTTT GGGCAGCCACGGCTGCATTACCTCGTCCGCTCCCTCGCTACCGCGTACATGAGCGAGCAC TCGGAAGACTACGCCATCCTCTTCGACGGCCCGGCGGAGTGGAAGAAGTACCTGACAGCG ATGAAGGAGCAGGGAACCTGGGGTGATGAGCTATGCCTCAACGCTGCCGCCCGTTGCTTT CGGGTTAACATCCACGTCATCACGAGCGACCAGGAGCGCTGGCACATTGTGTTCCAGCAC GACCAGCTAGGGCGCACGCGCACGGTTCGCAGCGACGAGGATGCGAGGACGAACAACATG GCGCAGACTTTGACCAGTTATGAAGGTGTGTCGCTGTTTCTCGCCTACCTCTCCCCGGTG CATTACGACGACATCACTCCCTTGCCCGTAGCACACCTCCAGCTCGGCGAGCTGCTCAGC GGGGAGCTGAACAAGCGCATGAAGCGCAATCAGACGACACACAGTCCCAGTGACAGTGGT AGCAGCACTTCTGCATTAGCATCAGCAGGCCCCAGCAGCGGCGGCCGCTGGGCAGATGCT TCGAACTTTTCACACCTGCCTTCCCGTCCGCTTCTCGCGGACCCGGCTAAACCGCGCACG AGATCGTCTGATGACCTTGTCAAGTCGTGCCTGGAGTCACCGACCGTGTCAAACGCGACG GCGCCACCGGTGCCACGCTCGCGGCCGCATTCCTGCAAGCCGGACACATACAAGAGCTCG GAGCCGCCGTCGCGGCCCCCGCCGACTTCGCCGACTAGCTTGCCAAGCGAGTACACATGC TAG
  • Download Fasta

  • Fasta :-

    MEYLDNLLNRKIERERLGAGGADASSSSAASAAGTSSKHVDGHGATGDRQLKSAALRLCW LCNRTSPLRFRLQGGIHLCFTCFRASYLSLLLPIINTPARRASDARFLKLIGSIENERAG SVSSPTDELLASMYGEVIEPQQASFVMSSSMMRLRREEEEQRLLSATRRPRSGGAASSAK SVKSFWNCPLCTFLNAAVARECEACGFVNPGEVTCPVCKARCSLGMIGTPLSEENPASRC KTGEPHCIWNCRECGGLNTLDGDRCTSCRQPRYWACSQCTALHHMARGEDGLRYCPTCGA YNTPDDILVGQAKIDKETRYAGMVTAQQSAAQRRKSGSKDHDHNRGGSRAAAGGAAAAKA DDQIVFGVNDAHTLEELERQKQIENNEKRLLSRLNRLHISRNLQKTDGNCLFRALANQLF GQPRLHYLVRSLATAYMSEHSEDYAILFDGPAEWKKYLTAMKEQGTWGDELCLNAAARCF RVNIHVITSDQERWHIVFQHDQLGRTRTVRSDEDARTNNMAQTLTSYEGVSLFLAYLSPV HYDDITPLPVAHLQLGELLSGELNKRMKRNQTTHSPSDSGSSTSALASAGPSSGGRWADA SNFSHLPSRPLLADPAKPRTRSSDDLVKSCLESPTVSNATAPPVPRSRPHSCKPDTYKSS EPPSRPPPTSPTSLPSEYTC

    No Results
  • title: Zn binding site
  • coordinates: C188-C205
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_351400.1172 SRRPRSGGAA0.996unspLdBPK_351400.1172 SRRPRSGGAA0.996unspLdBPK_351400.1172 SRRPRSGGAA0.996unspLdBPK_351400.1181 SSSAKSVKSF0.991unspLdBPK_351400.1336 SQRRKSGSKD0.997unspLdBPK_351400.1511 SRTVRSDEDA0.998unspLdBPK_351400.1575 SQTTHSPSDS0.997unspLdBPK_351400.1622 SPRTRSSDDL0.996unspLdBPK_351400.1651 SSRPHSCKPD0.998unspLdBPK_351400.1670 SPPPTSPTSL0.992unspLdBPK_351400.1103 SARRASDARF0.991unspLdBPK_351400.1124 SGSVSSPTDE0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India