LdBPK_352400.1 | aminopeptidase P, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0030145      

  • Computed_GO_Functions:  aminopeptidase activity      manganese ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_352400.1OTHER0.9997280.0001710.000101
No Results

  • Fasta :-

    >LdBPK_352400.1 MSAHDKSLAYPFPISMKMYREQRERLGASLQQAFPEGGHAAVLQAASEVPVNSTDCNYLF VQESYFHYLFGAEIPDAYGAVLAGGKSFFFIPRLPADFATWMGPLPTPQGVKAQLEVEEV HYVDEMEQVLMSSGVHTAEVLKGTNTDSGLEVLQAKLPEGTALATSTDYLYRVLSSQRCY KTALEADVLKYVCKVSSAAHVKVMQIAKPGMSQHHLESTFLHDVYYNGGCRRVSYTCICA TGSHGATLHYPDNNCVIEDGTMALLDMGGNYRGYAADITCSFPVNGKFTEAQKTIYNAVL DAHDRVMRAMKPGVKWMDMHLLAIRTICMHLIAAGILKGDIETLMTKEIMQYFQPHGLGH LIGIDVHDVGGYMEGCPERPTKKDCCRLRTARTIEEGLYMTIEPGCYFNTALLEMAKANP DVREHLNMEKLEGYENFGGVRIESDVLVTKDGVVNYTLVPRTVEEIERTMAGAPFTKEVE VYHN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_352400.1.fa Sequence name : LdBPK_352400 Sequence length : 484 VALUES OF COMPUTED PARAMETERS Coef20 : 3.820 CoefTot : -0.648 ChDiff : -16 ZoneTo : 20 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.218 2.012 0.250 0.607 MesoH : -0.065 0.365 -0.281 0.320 MuHd_075 : 26.869 15.779 5.402 6.024 MuHd_095 : 28.302 8.791 6.407 4.596 MuHd_100 : 28.856 10.234 6.270 5.285 MuHd_105 : 22.976 11.017 5.601 4.910 Hmax_075 : 7.525 6.737 -0.667 3.815 Hmax_095 : 6.738 2.100 -0.076 2.573 Hmax_100 : 7.300 4.700 -1.148 2.740 Hmax_105 : 7.817 5.367 -1.148 3.127 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9812 0.0188 DFMC : 0.9806 0.0194
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 484 LdBPK_352400.1 MSAHDKSLAYPFPISMKMYREQRERLGASLQQAFPEGGHAAVLQAASEVPVNSTDCNYLFVQESYFHYLFGAEIPDAYGA 80 VLAGGKSFFFIPRLPADFATWMGPLPTPQGVKAQLEVEEVHYVDEMEQVLMSSGVHTAEVLKGTNTDSGLEVLQAKLPEG 160 TALATSTDYLYRVLSSQRCYKTALEADVLKYVCKVSSAAHVKVMQIAKPGMSQHHLESTFLHDVYYNGGCRRVSYTCICA 240 TGSHGATLHYPDNNCVIEDGTMALLDMGGNYRGYAADITCSFPVNGKFTEAQKTIYNAVLDAHDRVMRAMKPGVKWMDMH 320 LLAIRTICMHLIAAGILKGDIETLMTKEIMQYFQPHGLGHLIGIDVHDVGGYMEGCPERPTKKDCCRLRTARTIEEGLYM 400 TIEPGCYFNTALLEMAKANPDVREHLNMEKLEGYENFGGVRIESDVLVTKDGVVNYTLVPRTVEEIERTMAGAPFTKEVE 480 VYHN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_352400.1 6 -MSAHDK|SL 0.095 . LdBPK_352400.1 17 PFPISMK|MY 0.065 . LdBPK_352400.1 20 ISMKMYR|EQ 0.103 . LdBPK_352400.1 23 KMYREQR|ER 0.156 . LdBPK_352400.1 25 YREQRER|LG 0.078 . LdBPK_352400.1 86 AVLAGGK|SF 0.067 . LdBPK_352400.1 93 SFFFIPR|LP 0.083 . LdBPK_352400.1 112 PTPQGVK|AQ 0.059 . LdBPK_352400.1 142 HTAEVLK|GT 0.065 . LdBPK_352400.1 156 LEVLQAK|LP 0.061 . LdBPK_352400.1 172 STDYLYR|VL 0.092 . LdBPK_352400.1 178 RVLSSQR|CY 0.082 . LdBPK_352400.1 181 SSQRCYK|TA 0.147 . LdBPK_352400.1 190 LEADVLK|YV 0.092 . LdBPK_352400.1 194 VLKYVCK|VS 0.072 . LdBPK_352400.1 202 SSAAHVK|VM 0.074 . LdBPK_352400.1 208 KVMQIAK|PG 0.065 . LdBPK_352400.1 231 YYNGGCR|RV 0.084 . LdBPK_352400.1 232 YNGGCRR|VS 0.128 . LdBPK_352400.1 272 DMGGNYR|GY 0.088 . LdBPK_352400.1 287 SFPVNGK|FT 0.075 . LdBPK_352400.1 293 KFTEAQK|TI 0.061 . LdBPK_352400.1 305 VLDAHDR|VM 0.080 . LdBPK_352400.1 308 AHDRVMR|AM 0.323 . LdBPK_352400.1 311 RVMRAMK|PG 0.158 . LdBPK_352400.1 315 AMKPGVK|WM 0.061 . LdBPK_352400.1 325 MHLLAIR|TI 0.080 . LdBPK_352400.1 338 IAAGILK|GD 0.074 . LdBPK_352400.1 347 IETLMTK|EI 0.061 . LdBPK_352400.1 379 MEGCPER|PT 0.082 . LdBPK_352400.1 382 CPERPTK|KD 0.155 . LdBPK_352400.1 383 PERPTKK|DC 0.121 . LdBPK_352400.1 387 TKKDCCR|LR 0.084 . LdBPK_352400.1 389 KDCCRLR|TA 0.143 . LdBPK_352400.1 392 CRLRTAR|TI 0.491 . LdBPK_352400.1 417 ALLEMAK|AN 0.067 . LdBPK_352400.1 423 KANPDVR|EH 0.085 . LdBPK_352400.1 430 EHLNMEK|LE 0.060 . LdBPK_352400.1 441 ENFGGVR|IE 0.102 . LdBPK_352400.1 450 SDVLVTK|DG 0.064 . LdBPK_352400.1 461 NYTLVPR|TV 0.161 . LdBPK_352400.1 468 TVEEIER|TM 0.085 . LdBPK_352400.1 477 AGAPFTK|EV 0.090 . ____________________________^_________________

  • Fasta :-

    >LdBPK_352400.1 ATGTCTGCACACGATAAGAGCTTGGCGTACCCCTTCCCCATCTCGATGAAGATGTATCGA GAGCAGCGTGAGCGGCTGGGTGCGTCGCTCCAGCAGGCGTTCCCGGAGGGTGGCCACGCA GCGGTGCTGCAGGCCGCCTCTGAGGTGCCCGTGAACTCGACGGACTGTAACTACCTCTTC GTGCAGGAGAGCTACTTCCACTACCTCTTCGGCGCGGAGATCCCGGACGCGTACGGTGCT GTGCTCGCGGGCGGCAAGAGCTTCTTCTTCATTCCGCGGCTGCCGGCGGATTTCGCGACG TGGATGGGCCCGCTGCCGACACCGCAGGGCGTGAAGGCGCAGCTGGAGGTGGAAGAGGTG CACTACGTGGACGAGATGGAGCAGGTGCTGATGAGCAGTGGGGTACACACCGCCGAGGTG CTGAAGGGCACGAACACGGACAGCGGTCTCGAGGTGCTGCAGGCGAAGCTGCCGGAGGGG ACCGCGCTGGCAACGTCCACCGACTACCTTTACCGCGTGCTGAGCTCGCAGCGCTGCTAC AAGACGGCCCTTGAGGCTGATGTGCTGAAGTATGTGTGCAAGGTGTCAAGCGCCGCGCAC GTCAAAGTGATGCAGATCGCGAAGCCCGGCATGTCGCAGCACCATCTCGAGTCTACATTC CTTCACGACGTGTACTACAATGGCGGCTGCCGCCGTGTGAGCTACACTTGCATCTGCGCC ACGGGCTCCCACGGTGCTACCCTGCATTACCCGGACAACAACTGCGTGATCGAGGACGGC ACGATGGCGCTGCTGGACATGGGCGGCAACTACCGCGGCTACGCGGCCGACATCACCTGC AGCTTCCCTGTGAACGGCAAGTTCACCGAGGCGCAGAAGACCATTTACAACGCGGTGCTC GACGCGCACGACAGGGTGATGCGCGCGATGAAGCCGGGTGTTAAGTGGATGGACATGCAC CTGCTCGCCATCCGCACGATCTGCATGCACCTGATCGCGGCGGGCATCCTCAAGGGCGAC ATCGAAACGCTCATGACGAAGGAGATCATGCAGTACTTCCAACCACACGGCCTCGGCCAC CTTATCGGCATCGACGTGCACGACGTTGGCGGCTACATGGAGGGTTGCCCTGAGCGGCCG ACGAAGAAGGACTGCTGCCGTCTGCGCACTGCGCGCACGATCGAGGAGGGGCTTTACATG ACCATCGAGCCTGGCTGCTACTTTAACACGGCACTTCTGGAGATGGCGAAGGCGAACCCG GATGTGCGGGAGCACCTGAACATGGAAAAGCTCGAGGGGTACGAGAATTTTGGTGGCGTG CGCATCGAGAGTGACGTCTTGGTCACGAAGGACGGCGTGGTGAACTACACTCTAGTGCCA CGAACGGTGGAAGAGATCGAGAGAACGATGGCGGGTGCGCCCTTCACGAAGGAGGTGGAG GTGTACCACAACTGA
  • Download Fasta

  • Fasta :-

    MSAHDKSLAYPFPISMKMYREQRERLGASLQQAFPEGGHAAVLQAASEVPVNSTDCNYLF VQESYFHYLFGAEIPDAYGAVLAGGKSFFFIPRLPADFATWMGPLPTPQGVKAQLEVEEV HYVDEMEQVLMSSGVHTAEVLKGTNTDSGLEVLQAKLPEGTALATSTDYLYRVLSSQRCY KTALEADVLKYVCKVSSAAHVKVMQIAKPGMSQHHLESTFLHDVYYNGGCRRVSYTCICA TGSHGATLHYPDNNCVIEDGTMALLDMGGNYRGYAADITCSFPVNGKFTEAQKTIYNAVL DAHDRVMRAMKPGVKWMDMHLLAIRTICMHLIAAGILKGDIETLMTKEIMQYFQPHGLGH LIGIDVHDVGGYMEGCPERPTKKDCCRLRTARTIEEGLYMTIEPGCYFNTALLEMAKANP DVREHLNMEKLEGYENFGGVRIESDVLVTKDGVVNYTLVPRTVEEIERTMAGAPFTKEVE VYHN

  • title: active site
  • coordinates: H249,D266,D277,H360,E403,E443
No Results
No Results
IDSitePeptideScoreMethod
LdBPK_352400.1234 SCRRVSYTCI0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India