LdBPK_362550.1 | serine peptidase, Clan SC, Family S9B

_IDPredictionOTHERSPmTPCS_Position
LdBPK_362550.1OTHER0.9987900.0000960.001114
No Results

  • Fasta :-

    >LdBPK_362550.1 MPPTALKSYMVELSRYMDAFTSASGKPQHLTIVGDRVYWTQGKQQELYSAPVGLEVAEAV RVIASEEQEVGEEEQLTKEEEMLRERTRSQTTGIKNFHVRWSDGAIFYTSGVEVYVYYQN GPRAGKTPLKLFDYMSEEDKTHFKAMGSKPNLFVQAIKSFDESHPSTHTVMTFVNNNNVY KATLTESPASEEAPLAVAVEQITHIGDDLHQCGVADYIIQEEFSRYTGHYATDRYIVFSY IDSSHMRSVALLSSLGSPEVPEAEPACQTYATETEEMPYSRVGDPNARTTLVVYDIATKQ MRLLPDVAIRKAAPWTEYILRFGFKDAETLYVSVVSRAQEDYAVMSCPIAALPTIAKEED LRSLYSDTGGPVTANIIGDAAAPGLHVEWKQRIDFAWVECQPGVPVHYGKVYDVLCRHAA ETETAHYHLYARPAGDGNPEAWKPLTAGAWNVCAGTQHVCEDRVYFLANAEGRLKRTLYS VPLSLESAPRIADALTRLTPLDEHVYSYCVKGDHLYYVSSTAAAPAKLYASCVSAPQKRA EVTVPSWIATTPGTDPATTADPTHYFGGLPVVTPQIVTVTSRRGVPLSAAVFVSPSAPKD APGPLALLIYGGPHAQLVFENDYETRCKAPVQVLLQHGISVAVVDNQMSNANGLRDLSIC KKNFGNFETHDYVDVTQYLCSTPASESGCPANFRFDAKRVAIFGWSYGGYAALLAMCQAA DVFRIGFAGAPVGDWKLYDTGYTERYMGTLYREDSSAESGASRNRNEAYMTSTISHYAGG FPEECNRLYIAHGLLDENVHFGHSCHVVKALIDNAKPYSMLVYPGERHGLRQNRQSRLHH DALLVKTLEEQL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_362550.1.fa Sequence name : LdBPK_362550 Sequence length : 852 VALUES OF COMPUTED PARAMETERS Coef20 : 3.939 CoefTot : -0.401 ChDiff : -26 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.700 1.376 0.257 0.683 MesoH : 0.226 0.427 -0.173 0.298 MuHd_075 : 10.267 9.864 3.950 1.131 MuHd_095 : 31.161 15.336 6.774 6.888 MuHd_100 : 27.527 12.874 6.158 6.298 MuHd_105 : 24.273 10.886 5.063 4.975 Hmax_075 : 1.750 10.617 -1.010 1.867 Hmax_095 : 14.438 10.675 0.949 4.480 Hmax_100 : 12.600 7.400 0.497 4.120 Hmax_105 : 13.417 9.917 0.795 4.503 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7667 0.2333 DFMC : 0.7583 0.2417
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 852 LdBPK_362550.1 MPPTALKSYMVELSRYMDAFTSASGKPQHLTIVGDRVYWTQGKQQELYSAPVGLEVAEAVRVIASEEQEVGEEEQLTKEE 80 EMLRERTRSQTTGIKNFHVRWSDGAIFYTSGVEVYVYYQNGPRAGKTPLKLFDYMSEEDKTHFKAMGSKPNLFVQAIKSF 160 DESHPSTHTVMTFVNNNNVYKATLTESPASEEAPLAVAVEQITHIGDDLHQCGVADYIIQEEFSRYTGHYATDRYIVFSY 240 IDSSHMRSVALLSSLGSPEVPEAEPACQTYATETEEMPYSRVGDPNARTTLVVYDIATKQMRLLPDVAIRKAAPWTEYIL 320 RFGFKDAETLYVSVVSRAQEDYAVMSCPIAALPTIAKEEDLRSLYSDTGGPVTANIIGDAAAPGLHVEWKQRIDFAWVEC 400 QPGVPVHYGKVYDVLCRHAAETETAHYHLYARPAGDGNPEAWKPLTAGAWNVCAGTQHVCEDRVYFLANAEGRLKRTLYS 480 VPLSLESAPRIADALTRLTPLDEHVYSYCVKGDHLYYVSSTAAAPAKLYASCVSAPQKRAEVTVPSWIATTPGTDPATTA 560 DPTHYFGGLPVVTPQIVTVTSRRGVPLSAAVFVSPSAPKDAPGPLALLIYGGPHAQLVFENDYETRCKAPVQVLLQHGIS 640 VAVVDNQMSNANGLRDLSICKKNFGNFETHDYVDVTQYLCSTPASESGCPANFRFDAKRVAIFGWSYGGYAALLAMCQAA 720 DVFRIGFAGAPVGDWKLYDTGYTERYMGTLYREDSSAESGASRNRNEAYMTSTISHYAGGFPEECNRLYIAHGLLDENVH 800 FGHSCHVVKALIDNAKPYSMLVYPGERHGLRQNRQSRLHHDALLVKTLEEQL 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...........................................................................P.... 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_362550.1 7 MPPTALK|SY 0.076 . LdBPK_362550.1 15 YMVELSR|YM 0.082 . LdBPK_362550.1 26 FTSASGK|PQ 0.066 . LdBPK_362550.1 36 LTIVGDR|VY 0.094 . LdBPK_362550.1 43 VYWTQGK|QQ 0.057 . LdBPK_362550.1 61 EVAEAVR|VI 0.079 . LdBPK_362550.1 78 EEEQLTK|EE 0.058 . LdBPK_362550.1 84 KEEEMLR|ER 0.077 . LdBPK_362550.1 86 EEMLRER|TR 0.075 . LdBPK_362550.1 88 MLRERTR|SQ 0.208 . LdBPK_362550.1 95 SQTTGIK|NF 0.056 . LdBPK_362550.1 100 IKNFHVR|WS 0.189 . LdBPK_362550.1 123 YYQNGPR|AG 0.073 . LdBPK_362550.1 126 NGPRAGK|TP 0.095 . LdBPK_362550.1 130 AGKTPLK|LF 0.058 . LdBPK_362550.1 140 YMSEEDK|TH 0.068 . LdBPK_362550.1 144 EDKTHFK|AM 0.078 . LdBPK_362550.1 149 FKAMGSK|PN 0.062 . LdBPK_362550.1 158 LFVQAIK|SF 0.088 . LdBPK_362550.1 181 NNNNVYK|AT 0.077 . LdBPK_362550.1 225 IQEEFSR|YT 0.114 . LdBPK_362550.1 234 GHYATDR|YI 0.089 . LdBPK_362550.1 247 IDSSHMR|SV 0.185 . LdBPK_362550.1 281 EEMPYSR|VG 0.088 . LdBPK_362550.1 288 VGDPNAR|TT 0.077 . LdBPK_362550.1 299 VYDIATK|QM 0.053 . LdBPK_362550.1 302 IATKQMR|LL 0.086 . LdBPK_362550.1 310 LPDVAIR|KA 0.097 . LdBPK_362550.1 311 PDVAIRK|AA 0.085 . LdBPK_362550.1 321 WTEYILR|FG 0.088 . LdBPK_362550.1 325 ILRFGFK|DA 0.103 . LdBPK_362550.1 337 YVSVVSR|AQ 0.138 . LdBPK_362550.1 357 ALPTIAK|EE 0.053 . LdBPK_362550.1 362 AKEEDLR|SL 0.103 . LdBPK_362550.1 390 GLHVEWK|QR 0.073 . LdBPK_362550.1 392 HVEWKQR|ID 0.100 . LdBPK_362550.1 410 VPVHYGK|VY 0.067 . LdBPK_362550.1 417 VYDVLCR|HA 0.098 . LdBPK_362550.1 432 HYHLYAR|PA 0.191 . LdBPK_362550.1 443 GNPEAWK|PL 0.068 . LdBPK_362550.1 463 QHVCEDR|VY 0.075 . LdBPK_362550.1 473 LANAEGR|LK 0.087 . LdBPK_362550.1 475 NAEGRLK|RT 0.055 . LdBPK_362550.1 476 AEGRLKR|TL 0.522 *ProP* LdBPK_362550.1 490 SLESAPR|IA 0.113 . LdBPK_362550.1 497 IADALTR|LT 0.083 . LdBPK_362550.1 511 VYSYCVK|GD 0.068 . LdBPK_362550.1 527 TAAAPAK|LY 0.073 . LdBPK_362550.1 538 CVSAPQK|RA 0.082 . LdBPK_362550.1 539 VSAPQKR|AE 0.212 . LdBPK_362550.1 582 IVTVTSR|RG 0.066 . LdBPK_362550.1 583 VTVTSRR|GV 0.164 . LdBPK_362550.1 599 VSPSAPK|DA 0.070 . LdBPK_362550.1 626 ENDYETR|CK 0.090 . LdBPK_362550.1 628 DYETRCK|AP 0.066 . LdBPK_362550.1 655 SNANGLR|DL 0.131 . LdBPK_362550.1 661 RDLSICK|KN 0.061 . LdBPK_362550.1 662 DLSICKK|NF 0.129 . LdBPK_362550.1 694 GCPANFR|FD 0.092 . LdBPK_362550.1 698 NFRFDAK|RV 0.081 . LdBPK_362550.1 699 FRFDAKR|VA 0.218 . LdBPK_362550.1 724 QAADVFR|IG 0.112 . LdBPK_362550.1 736 APVGDWK|LY 0.071 . LdBPK_362550.1 745 DTGYTER|YM 0.096 . LdBPK_362550.1 752 YMGTLYR|ED 0.107 . LdBPK_362550.1 763 AESGASR|NR 0.103 . LdBPK_362550.1 765 SGASRNR|NE 0.085 . LdBPK_362550.1 787 FPEECNR|LY 0.077 . LdBPK_362550.1 809 HSCHVVK|AL 0.074 . LdBPK_362550.1 816 ALIDNAK|PY 0.068 . LdBPK_362550.1 827 LVYPGER|HG 0.072 . LdBPK_362550.1 831 GERHGLR|QN 0.107 . LdBPK_362550.1 834 HGLRQNR|QS 0.208 . LdBPK_362550.1 837 RQNRQSR|LH 0.324 . LdBPK_362550.1 846 HDALLVK|TL 0.072 . ____________________________^_________________

  • Fasta :-

    >LdBPK_362550.1 ATGCCGCCGACGGCGCTGAAGAGCTACATGGTCGAGCTCTCTCGGTACATGGACGCCTTC ACGTCTGCATCGGGCAAACCGCAGCACCTCACGATTGTTGGCGATCGTGTCTACTGGACG CAGGGCAAGCAGCAGGAGCTGTACTCGGCGCCGGTCGGCTTGGAAGTCGCCGAGGCGGTC CGTGTCATTGCCTCAGAGGAGCAGGAAGTCGGGGAAGAGGAGCAGCTCACCAAGGAAGAG GAGATGCTGCGCGAGCGGACGCGCAGCCAGACGACGGGCATCAAGAATTTTCACGTTCGC TGGAGTGATGGCGCCATCTTCTACACGAGCGGCGTCGAAGTGTATGTCTACTACCAGAAC GGGCCGCGTGCCGGCAAGACCCCTCTGAAGCTGTTCGACTACATGTCTGAGGAAGACAAG ACTCACTTCAAGGCGATGGGCAGCAAGCCAAACCTCTTTGTGCAGGCCATCAAGTCCTTT GACGAGTCGCACCCGAGCACCCACACCGTCATGACCTTTGTCAATAATAACAATGTGTAC AAGGCAACCCTGACGGAGAGCCCCGCAAGCGAGGAGGCGCCACTGGCCGTCGCCGTGGAA CAGATCACGCACATCGGCGACGACCTGCACCAGTGCGGTGTGGCGGATTACATCATCCAG GAAGAGTTCTCGCGGTACACGGGGCACTACGCGACGGACCGGTACATCGTCTTCTCCTAC ATCGACTCCTCCCACATGCGCTCTGTGGCCCTGCTCAGCAGTCTGGGATCTCCTGAGGTG CCGGAAGCGGAGCCGGCGTGCCAGACCTACGCGACAGAGACGGAGGAGATGCCGTACTCC CGTGTCGGTGACCCGAACGCGCGCACGACACTTGTCGTGTACGACATCGCCACGAAGCAG ATGCGTCTGCTCCCTGACGTCGCCATTCGAAAGGCGGCACCGTGGACGGAGTACATTCTT CGCTTCGGCTTCAAAGATGCAGAAACGCTTTATGTCTCCGTCGTGAGTCGCGCACAGGAG GACTACGCGGTGATGAGCTGCCCCATCGCAGCGCTGCCCACCATCGCCAAAGAAGAAGAC CTGCGGTCCCTCTACAGTGACACGGGCGGTCCAGTCACTGCGAACATTATTGGCGATGCC GCCGCGCCGGGGTTGCACGTGGAGTGGAAGCAACGCATTGACTTTGCGTGGGTGGAGTGC CAGCCCGGGGTGCCGGTGCACTACGGCAAGGTGTACGACGTGCTTTGCCGCCACGCAGCA GAGACGGAGACGGCGCACTACCACCTCTACGCCCGTCCCGCCGGCGACGGCAATCCAGAG GCATGGAAACCGCTGACGGCGGGAGCGTGGAACGTGTGCGCGGGCACGCAGCATGTGTGT GAGGACCGCGTGTACTTCCTGGCGAACGCCGAAGGTCGCCTGAAGCGCACGCTCTACTCC GTGCCGCTCTCGCTGGAGAGTGCGCCGCGCATCGCCGACGCACTGACGCGCCTCACTCCG CTGGACGAGCACGTCTACAGCTACTGTGTCAAGGGTGACCATCTCTACTATGTCTCCAGC ACCGCCGCTGCACCGGCGAAGCTCTACGCGAGCTGCGTCTCAGCACCGCAGAAGAGAGCG GAGGTCACCGTTCCGTCATGGATTGCCACAACGCCAGGAACCGACCCGGCCACAACAGCA GATCCAACCCACTACTTTGGCGGCCTGCCGGTCGTGACTCCGCAAATTGTGACCGTGACG AGCCGTCGTGGGGTACCACTGAGCGCAGCGGTGTTCGTCTCGCCAAGCGCGCCAAAGGAT GCACCAGGGCCACTAGCTCTGCTCATCTACGGCGGACCACATGCGCAGCTCGTGTTCGAG AATGACTACGAGACCCGCTGCAAGGCCCCGGTGCAGGTATTGCTGCAGCACGGCATCTCT GTTGCTGTAGTGGACAACCAAATGAGCAACGCTAACGGGTTGCGTGACTTGAGCATCTGC AAGAAGAACTTTGGCAACTTCGAGACACACGACTATGTCGATGTGACTCAGTACCTCTGC AGCACGCCGGCGTCCGAGAGCGGTTGCCCCGCCAACTTCCGTTTTGACGCGAAGCGTGTG GCGATCTTTGGCTGGTCCTACGGCGGCTATGCAGCCCTCCTCGCCATGTGTCAGGCGGCG GATGTCTTTCGGATCGGCTTCGCGGGTGCGCCAGTTGGCGACTGGAAACTGTACGACACA GGCTACACAGAGCGCTACATGGGGACCCTTTACAGGGAGGACAGCAGCGCTGAAAGCGGT GCATCGCGAAACAGGAACGAGGCGTACATGACGTCCACCATCAGCCATTACGCCGGCGGC TTTCCCGAGGAGTGCAACCGCCTCTACATCGCACACGGCCTCCTCGACGAGAACGTGCAC TTTGGCCACAGCTGCCACGTGGTGAAGGCATTAATCGACAACGCCAAGCCGTACAGCATG CTCGTGTACCCCGGGGAGCGCCACGGCCTGCGTCAGAACCGCCAATCACGCTTGCACCAC GACGCACTTCTCGTCAAGACACTAGAGGAGCAGCTCTAG
  • Download Fasta

  • Fasta :-

    MPPTALKSYMVELSRYMDAFTSASGKPQHLTIVGDRVYWTQGKQQELYSAPVGLEVAEAV RVIASEEQEVGEEEQLTKEEEMLRERTRSQTTGIKNFHVRWSDGAIFYTSGVEVYVYYQN GPRAGKTPLKLFDYMSEEDKTHFKAMGSKPNLFVQAIKSFDESHPSTHTVMTFVNNNNVY KATLTESPASEEAPLAVAVEQITHIGDDLHQCGVADYIIQEEFSRYTGHYATDRYIVFSY IDSSHMRSVALLSSLGSPEVPEAEPACQTYATETEEMPYSRVGDPNARTTLVVYDIATKQ MRLLPDVAIRKAAPWTEYILRFGFKDAETLYVSVVSRAQEDYAVMSCPIAALPTIAKEED LRSLYSDTGGPVTANIIGDAAAPGLHVEWKQRIDFAWVECQPGVPVHYGKVYDVLCRHAA ETETAHYHLYARPAGDGNPEAWKPLTAGAWNVCAGTQHVCEDRVYFLANAEGRLKRTLYS VPLSLESAPRIADALTRLTPLDEHVYSYCVKGDHLYYVSSTAAAPAKLYASCVSAPQKRA EVTVPSWIATTPGTDPATTADPTHYFGGLPVVTPQIVTVTSRRGVPLSAAVFVSPSAPKD APGPLALLIYGGPHAQLVFENDYETRCKAPVQVLLQHGISVAVVDNQMSNANGLRDLSIC KKNFGNFETHDYVDVTQYLCSTPASESGCPANFRFDAKRVAIFGWSYGGYAALLAMCQAA DVFRIGFAGAPVGDWKLYDTGYTERYMGTLYREDSSAESGASRNRNEAYMTSTISHYAGG FPEECNRLYIAHGLLDENVHFGHSCHVVKALIDNAKPYSMLVYPGERHGLRQNRQSRLHH DALLVKTLEEQL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_362550.1190 SESPASEEAP0.996unspLdBPK_362550.1239 SYIVFSYIDS0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India