LdBPK_364510.1 | trypanothione synthetase-like protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
LdBPK_364510.1OTHER0.9990270.0009180.000055
No Results

  • Fasta :-

    >LdBPK_364510.1 MTVNVASEVSPLPYGEHQGSFRGVVACSNRDDGYFSGENNYVDTSIYTGFRYQCVEYARR FLLLTTGCVFANCGRASEIYAMDHITHVETGAQYTLHRHHNDGTATQKPAPGDIIVYPYH PELTPWGHVGVISFVDDNRVGIAEQNHYFGPFTSPNESYLDGERCVERYAMLTFDEATKT WHIREPGSMPSAAGWLSYPDAPTREQIHAPFTPLPCAIKVRSTPFDQDDHPFLTHYHLHN GFDIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFRRGRLGPSFRALPTNPLN ATLPEGAGASAEACREVDALFKVLAEKDVVNATETTPDRLRQAVATYFDIPIEWMMAMER DFAKGETHMAAVVSFYPNIETDSAALEAFRAARKRSGTWAAPAVGTVPRTTANASTPVAE EPLAVSYPATAEEFPVKNPHDEAWHVAKVNFGNARVMTELSQLNKVQQELTGTIALMTPS MRPFISTQYRMDFAGYLKVVEAVYGPRTSFTIVMSDDQPMDGLLRELVWTLQNLCELVEY PVRVVNEKDLTFVNGKLHATPSAVSPEAGSRTTNIAPSGAYDVNFVYALCEWPRILADRE ATHAALYLAAVDPASDVVFAKPLWSCLCSGAVNVSDDAERAHDSHSPRSTSVRFFDVCRR LYLLASPKQQPKTWDLEVSEYKDSCRRIHVDAETVPMHSPAHLNADSLMINLAGSCYMGH VGGTLSVESENTGVHAGHPASLMFMFPAD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_364510.1.fa Sequence name : LdBPK_364510 Sequence length : 749 VALUES OF COMPUTED PARAMETERS Coef20 : 3.070 CoefTot : 0.119 ChDiff : -24 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.359 0.170 0.519 MesoH : -0.325 0.385 -0.265 0.231 MuHd_075 : 15.496 7.954 5.381 2.178 MuHd_095 : 12.865 8.642 2.562 2.030 MuHd_100 : 10.346 13.153 3.133 2.874 MuHd_105 : 10.296 16.382 4.868 3.458 Hmax_075 : 11.083 9.100 1.439 3.967 Hmax_095 : 7.700 5.075 -0.872 2.581 Hmax_100 : 5.400 8.300 -0.644 3.270 Hmax_105 : 5.400 11.433 -0.164 3.652 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9912 0.0088 DFMC : 0.9753 0.0247
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 749 LdBPK_364510.1 MTVNVASEVSPLPYGEHQGSFRGVVACSNRDDGYFSGENNYVDTSIYTGFRYQCVEYARRFLLLTTGCVFANCGRASEIY 80 AMDHITHVETGAQYTLHRHHNDGTATQKPAPGDIIVYPYHPELTPWGHVGVISFVDDNRVGIAEQNHYFGPFTSPNESYL 160 DGERCVERYAMLTFDEATKTWHIREPGSMPSAAGWLSYPDAPTREQIHAPFTPLPCAIKVRSTPFDQDDHPFLTHYHLHN 240 GFDIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFRRGRLGPSFRALPTNPLNATLPEGAGASAEACREVDAL 320 FKVLAEKDVVNATETTPDRLRQAVATYFDIPIEWMMAMERDFAKGETHMAAVVSFYPNIETDSAALEAFRAARKRSGTWA 400 APAVGTVPRTTANASTPVAEEPLAVSYPATAEEFPVKNPHDEAWHVAKVNFGNARVMTELSQLNKVQQELTGTIALMTPS 480 MRPFISTQYRMDFAGYLKVVEAVYGPRTSFTIVMSDDQPMDGLLRELVWTLQNLCELVEYPVRVVNEKDLTFVNGKLHAT 560 PSAVSPEAGSRTTNIAPSGAYDVNFVYALCEWPRILADREATHAALYLAAVDPASDVVFAKPLWSCLCSGAVNVSDDAER 640 AHDSHSPRSTSVRFFDVCRRLYLLASPKQQPKTWDLEVSEYKDSCRRIHVDAETVPMHSPAHLNADSLMINLAGSCYMGH 720 VGGTLSVESENTGVHAGHPASLMFMFPAD 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_364510.1 22 EHQGSFR|GV 0.130 . LdBPK_364510.1 30 VVACSNR|DD 0.110 . LdBPK_364510.1 51 SIYTGFR|YQ 0.079 . LdBPK_364510.1 59 QCVEYAR|RF 0.068 . LdBPK_364510.1 60 CVEYARR|FL 0.096 . LdBPK_364510.1 75 VFANCGR|AS 0.090 . LdBPK_364510.1 98 AQYTLHR|HH 0.113 . LdBPK_364510.1 108 DGTATQK|PA 0.061 . LdBPK_364510.1 139 SFVDDNR|VG 0.080 . LdBPK_364510.1 164 SYLDGER|CV 0.086 . LdBPK_364510.1 168 GERCVER|YA 0.120 . LdBPK_364510.1 179 TFDEATK|TW 0.066 . LdBPK_364510.1 184 TKTWHIR|EP 0.114 . LdBPK_364510.1 204 YPDAPTR|EQ 0.090 . LdBPK_364510.1 219 PLPCAIK|VR 0.057 . LdBPK_364510.1 221 PCAIKVR|ST 0.148 . LdBPK_364510.1 250 IPSGCVR|HA 0.157 . LdBPK_364510.1 256 RHAYGMR|NG 0.085 . LdBPK_364510.1 272 ATSAAAR|VL 0.107 . LdBPK_364510.1 275 AAARVLR|FT 0.323 . LdBPK_364510.1 283 TLHLLFR|RG 0.081 . LdBPK_364510.1 284 LHLLFRR|GR 0.080 . LdBPK_364510.1 286 LLFRRGR|LG 0.136 . LdBPK_364510.1 292 RLGPSFR|AL 0.103 . LdBPK_364510.1 315 ASAEACR|EV 0.169 . LdBPK_364510.1 322 EVDALFK|VL 0.054 . LdBPK_364510.1 327 FKVLAEK|DV 0.082 . LdBPK_364510.1 339 TETTPDR|LR 0.076 . LdBPK_364510.1 341 TTPDRLR|QA 0.087 . LdBPK_364510.1 360 WMMAMER|DF 0.157 . LdBPK_364510.1 364 MERDFAK|GE 0.077 . LdBPK_364510.1 390 AALEAFR|AA 0.086 . LdBPK_364510.1 393 EAFRAAR|KR 0.219 . LdBPK_364510.1 394 AFRAARK|RS 0.079 . LdBPK_364510.1 395 FRAARKR|SG 0.425 . LdBPK_364510.1 409 AVGTVPR|TT 0.090 . LdBPK_364510.1 437 AEEFPVK|NP 0.067 . LdBPK_364510.1 448 EAWHVAK|VN 0.075 . LdBPK_364510.1 455 VNFGNAR|VM 0.079 . LdBPK_364510.1 465 ELSQLNK|VQ 0.061 . LdBPK_364510.1 482 LMTPSMR|PF 0.080 . LdBPK_364510.1 490 FISTQYR|MD 0.137 . LdBPK_364510.1 498 DFAGYLK|VV 0.069 . LdBPK_364510.1 507 EAVYGPR|TS 0.087 . LdBPK_364510.1 525 PMDGLLR|EL 0.070 . LdBPK_364510.1 543 LVEYPVR|VV 0.095 . LdBPK_364510.1 548 VRVVNEK|DL 0.079 . LdBPK_364510.1 556 LTFVNGK|LH 0.054 . LdBPK_364510.1 571 SPEAGSR|TT 0.094 . LdBPK_364510.1 594 ALCEWPR|IL 0.112 . LdBPK_364510.1 599 PRILADR|EA 0.118 . LdBPK_364510.1 621 SDVVFAK|PL 0.085 . LdBPK_364510.1 640 VSDDAER|AH 0.075 . LdBPK_364510.1 648 HDSHSPR|ST 0.320 . LdBPK_364510.1 653 PRSTSVR|FF 0.181 . LdBPK_364510.1 659 RFFDVCR|RL 0.068 . LdBPK_364510.1 660 FFDVCRR|LY 0.076 . LdBPK_364510.1 668 YLLASPK|QQ 0.057 . LdBPK_364510.1 672 SPKQQPK|TW 0.073 . LdBPK_364510.1 682 LEVSEYK|DS 0.069 . LdBPK_364510.1 686 EYKDSCR|RI 0.088 . LdBPK_364510.1 687 YKDSCRR|IH 0.111 . ____________________________^_________________

  • Fasta :-

    >LdBPK_364510.1 ATGACTGTCAATGTCGCGTCAGAGGTCTCGCCGCTACCATATGGTGAGCATCAAGGCAGC TTTCGGGGTGTTGTGGCGTGCTCTAACCGCGATGACGGCTACTTCAGCGGCGAGAACAAC TACGTAGACACGTCAATCTACACCGGGTTTCGCTACCAATGCGTTGAGTACGCGCGCCGC TTTCTGCTGCTGACGACCGGCTGCGTCTTTGCGAACTGTGGCAGAGCCAGCGAGATCTAC GCGATGGATCACATCACACACGTGGAGACGGGGGCGCAGTACACTCTCCATCGCCACCAC AACGACGGCACAGCAACGCAGAAGCCGGCGCCGGGTGACATCATCGTCTACCCTTACCAC CCAGAACTAACTCCATGGGGTCACGTTGGTGTCATATCCTTCGTTGACGATAACCGCGTC GGCATCGCAGAGCAGAACCACTACTTCGGCCCTTTCACCTCGCCGAATGAGTCGTACCTC GACGGTGAGCGGTGCGTCGAACGGTACGCCATGCTCACGTTCGACGAGGCGACCAAGACA TGGCACATCAGGGAACCGGGCTCGATGCCGAGTGCCGCGGGTTGGCTGTCGTACCCTGAT GCGCCGACCCGCGAGCAGATTCACGCGCCGTTCACGCCGCTTCCCTGCGCGATCAAGGTG CGCTCGACCCCATTCGACCAAGACGACCATCCTTTCCTCACACACTACCACCTGCACAAC GGCTTCGACATCCCCAGCGGGTGTGTGAGGCATGCGTACGGCATGCGAAACGGCACCGCC GAAACGTTGGTAGGCGCGACAAGCGCCGCCGCACGCGTGCTGCGGTTTACACTTCATCTT CTTTTCCGTCGCGGCCGCCTCGGCCCTTCCTTTCGCGCGTTACCCACGAATCCGCTGAAC GCCACACTGCCGGAGGGTGCGGGTGCAAGCGCGGAGGCATGTCGCGAGGTGGACGCACTC TTCAAGGTGCTCGCCGAGAAAGATGTCGTCAATGCCACCGAGACGACCCCCGATAGGCTG CGTCAGGCTGTGGCAACTTACTTTGACATCCCAATCGAGTGGATGATGGCCATGGAGCGG GACTTCGCGAAAGGGGAGACACACATGGCAGCGGTCGTCAGCTTCTACCCGAACATCGAG ACAGACTCGGCCGCCCTGGAGGCGTTTCGCGCAGCACGCAAGCGTTCAGGGACATGGGCA GCGCCGGCCGTTGGGACGGTGCCGCGGACAACAGCCAACGCCAGTACCCCCGTCGCCGAA GAGCCCCTCGCCGTGAGCTACCCAGCTACTGCCGAGGAGTTCCCAGTCAAGAACCCTCAT GATGAGGCGTGGCACGTGGCAAAAGTGAACTTCGGCAACGCGCGCGTCATGACAGAGCTG TCGCAGCTCAATAAGGTGCAGCAGGAGCTGACGGGGACGATCGCGCTCATGACACCATCC ATGCGCCCCTTCATCTCCACGCAGTACCGCATGGACTTTGCGGGCTACCTCAAGGTCGTT GAGGCCGTCTACGGCCCTCGCACTAGCTTCACGATTGTCATGAGCGATGACCAACCGATG GACGGCTTGCTGCGGGAGCTTGTCTGGACCCTGCAGAATTTGTGCGAGCTCGTCGAGTAC CCGGTCCGCGTTGTGAATGAGAAGGACCTGACGTTTGTGAATGGCAAGCTGCACGCCACG CCGTCAGCGGTCTCTCCAGAGGCGGGCAGCCGAACGACCAACATCGCGCCTAGTGGGGCG TACGATGTGAACTTTGTGTACGCGCTGTGCGAATGGCCGCGCATTTTGGCCGACAGAGAG GCCACCCACGCTGCCCTGTACCTCGCCGCTGTGGACCCAGCGTCGGATGTTGTGTTTGCG AAGCCGCTGTGGTCGTGCCTCTGCTCTGGTGCGGTGAACGTCAGCGACGACGCAGAGAGG GCGCACGACAGTCATTCGCCGCGCTCCACGTCGGTGCGCTTCTTCGATGTGTGCCGCCGC CTGTATCTGCTGGCATCGCCGAAGCAGCAGCCGAAAACATGGGATTTAGAAGTATCCGAG TACAAGGATAGCTGCCGCCGCATTCACGTCGACGCCGAGACGGTGCCGATGCACTCTCCA GCCCACCTCAACGCCGACTCCCTCATGATCAATCTAGCGGGGAGCTGCTACATGGGACAC GTCGGCGGCACACTGAGTGTTGAATCGGAGAACACCGGCGTCCACGCCGGCCACCCGGCT TCCCTCATGTTCATGTTTCCCGCCGACTAG
  • Download Fasta

  • Fasta :-

    MTVNVASEVSPLPYGEHQGSFRGVVACSNRDDGYFSGENNYVDTSIYTGFRYQCVEYARR FLLLTTGCVFANCGRASEIYAMDHITHVETGAQYTLHRHHNDGTATQKPAPGDIIVYPYH PELTPWGHVGVISFVDDNRVGIAEQNHYFGPFTSPNESYLDGERCVERYAMLTFDEATKT WHIREPGSMPSAAGWLSYPDAPTREQIHAPFTPLPCAIKVRSTPFDQDDHPFLTHYHLHN GFDIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFRRGRLGPSFRALPTNPLN ATLPEGAGASAEACREVDALFKVLAEKDVVNATETTPDRLRQAVATYFDIPIEWMMAMER DFAKGETHMAAVVSFYPNIETDSAALEAFRAARKRSGTWAAPAVGTVPRTTANASTPVAE EPLAVSYPATAEEFPVKNPHDEAWHVAKVNFGNARVMTELSQLNKVQQELTGTIALMTPS MRPFISTQYRMDFAGYLKVVEAVYGPRTSFTIVMSDDQPMDGLLRELVWTLQNLCELVEY PVRVVNEKDLTFVNGKLHATPSAVSPEAGSRTTNIAPSGAYDVNFVYALCEWPRILADRE ATHAALYLAAVDPASDVVFAKPLWSCLCSGAVNVSDDAERAHDSHSPRSTSVRFFDVCRR LYLLASPKQQPKTWDLEVSEYKDSCRRIHVDAETVPMHSPAHLNADSLMINLAGSCYMGH VGGTLSVESENTGVHAGHPASLMFMFPAD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_364510.1646 SHDSHSPRST0.997unspLdBPK_364510.1646 SHDSHSPRST0.997unspLdBPK_364510.1646 SHDSHSPRST0.997unspLdBPK_364510.1651 SPRSTSVRFF0.996unspLdBPK_364510.1158 SSPNESYLDG0.997unspLdBPK_364510.1565 SPSAVSPEAG0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India