LdBPK_365800.1 | aminopeptidase P1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0030145      

  • Computed_GO_Functions:  aminopeptidase activity      manganese ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LdBPK_365800.1mTP0.0255460.0001300.974324CS pos: 28-29. TRW-VG. Pr: 0.5193
No Results

  • Fasta :-

    >LdBPK_365800.1 MLRRLRRAWCTAPAQRHSVPLTLGSTRWVGGSAAVAEEVSAQEYADRRRRFLECLPDNSI VLLPAADESLYSHDILWPHRQDSLWYHLFGMRVPMRRQLAPPSSAITEDVRITIAAFAKG MKGIPTQTLLCVPPVTTDTATLVWGSEAVPLSQYKRLLCADADGGMLSPCTHENVVTTNE VGTVCAAVRRLITDMAQQQVKEWAEHSGVELSTLSGGGGGEGVQAGRLLALGVLPRVFAA YPQQLRWDGRGYRLRQPAASMRLAKARDVADSTSVFRHPLEAFFSTLSAMPFVVHLPRPL PLATAAAPGQQPTCSVVAFRYSAVAGHTPGLVPSTANALPKRGRVPCPLRGRDSPAAVAT ASASADSEPDATMQLCLPVRRSDAYAWLYRQFKGPSQLRQHLRSARATEDAFLQLMYRAP ATLSEHALHCAFQRAVCDISAHAGPAAQVRCAYIPVVASGVRGSEIHFTDNDGVAAPGDV VRVDAGVEVDGVPTDCARTLPIGSSRFPSSYVPLYEGLLQIQRKLLRCMKPGASVRDMAR MHIDETRALLCLLGVDVRRAASSSATPSPCPHESATATSSPEQQVPLALVRSCFCAHLFG HFFGLDIHEELSSVSRPLPTAAAKEEVAQRQRPTPRILQGGMMHTVEPGVYVPSAQRAAL FGLERAHLPIAFHGGVGVQIEDDVLVLPSPDGEDVDVCKGGEPLVRCPWSRGDYLQHALA AFHRYHGSGDAGLMPSLLVSVCDAHVPTVWGGCMTAATQNVLRFLFAQRVAMEGLPKAKA SVETDVCAIQQQTFVPNPAYSNGPPVPHAAVSDWYPYSSIVLTATIPKDIALIEAVMRQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_365800.1.fa Sequence name : LdBPK_365800 Sequence length : 839 VALUES OF COMPUTED PARAMETERS Coef20 : 4.907 CoefTot : 0.830 ChDiff : 5 ZoneTo : 36 KR : 6 DE : 0 CleavSite : 29 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.312 1.500 0.136 0.562 MesoH : 0.222 0.461 -0.185 0.267 MuHd_075 : 37.884 16.791 8.252 8.772 MuHd_095 : 27.239 12.678 6.116 7.106 MuHd_100 : 27.992 14.844 6.624 6.618 MuHd_105 : 33.620 18.719 6.433 8.093 Hmax_075 : 13.417 12.367 2.827 4.363 Hmax_095 : 10.150 7.600 1.584 1.304 Hmax_100 : 13.000 12.200 2.326 2.850 Hmax_105 : 10.000 11.100 -0.064 4.500 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0522 0.9478 DFMC : 0.0250 0.9750 This protein is probably imported in mitochondria. f(Ser) = 0.0833 f(Arg) = 0.1667 CMi = 0.27473 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 839 LdBPK_365800.1 MLRRLRRAWCTAPAQRHSVPLTLGSTRWVGGSAAVAEEVSAQEYADRRRRFLECLPDNSIVLLPAADESLYSHDILWPHR 80 QDSLWYHLFGMRVPMRRQLAPPSSAITEDVRITIAAFAKGMKGIPTQTLLCVPPVTTDTATLVWGSEAVPLSQYKRLLCA 160 DADGGMLSPCTHENVVTTNEVGTVCAAVRRLITDMAQQQVKEWAEHSGVELSTLSGGGGGEGVQAGRLLALGVLPRVFAA 240 YPQQLRWDGRGYRLRQPAASMRLAKARDVADSTSVFRHPLEAFFSTLSAMPFVVHLPRPLPLATAAAPGQQPTCSVVAFR 320 YSAVAGHTPGLVPSTANALPKRGRVPCPLRGRDSPAAVATASASADSEPDATMQLCLPVRRSDAYAWLYRQFKGPSQLRQ 400 HLRSARATEDAFLQLMYRAPATLSEHALHCAFQRAVCDISAHAGPAAQVRCAYIPVVASGVRGSEIHFTDNDGVAAPGDV 480 VRVDAGVEVDGVPTDCARTLPIGSSRFPSSYVPLYEGLLQIQRKLLRCMKPGASVRDMARMHIDETRALLCLLGVDVRRA 560 ASSSATPSPCPHESATATSSPEQQVPLALVRSCFCAHLFGHFFGLDIHEELSSVSRPLPTAAAKEEVAQRQRPTPRILQG 640 GMMHTVEPGVYVPSAQRAALFGLERAHLPIAFHGGVGVQIEDDVLVLPSPDGEDVDVCKGGEPLVRCPWSRGDYLQHALA 720 AFHRYHGSGDAGLMPSLLVSVCDAHVPTVWGGCMTAATQNVLRFLFAQRVAMEGLPKAKASVETDVCAIQQQTFVPNPAY 800 SNGPPVPHAAVSDWYPYSSIVLTATIPKDIALIEAVMRQ 880 ......P......................................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ....................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LdBPK_365800.1 3 ----MLR|RL 0.081 . LdBPK_365800.1 4 ---MLRR|LR 0.103 . LdBPK_365800.1 6 -MLRRLR|RA 0.174 . LdBPK_365800.1 7 MLRRLRR|AW 0.667 *ProP* LdBPK_365800.1 16 CTAPAQR|HS 0.083 . LdBPK_365800.1 27 LTLGSTR|WV 0.142 . LdBPK_365800.1 47 AQEYADR|RR 0.073 . LdBPK_365800.1 48 QEYADRR|RR 0.077 . LdBPK_365800.1 49 EYADRRR|RF 0.114 . LdBPK_365800.1 50 YADRRRR|FL 0.499 . LdBPK_365800.1 80 DILWPHR|QD 0.078 . LdBPK_365800.1 92 YHLFGMR|VP 0.064 . LdBPK_365800.1 96 GMRVPMR|RQ 0.082 . LdBPK_365800.1 97 MRVPMRR|QL 0.138 . LdBPK_365800.1 111 AITEDVR|IT 0.083 . LdBPK_365800.1 119 TIAAFAK|GM 0.088 . LdBPK_365800.1 122 AFAKGMK|GI 0.068 . LdBPK_365800.1 155 VPLSQYK|RL 0.059 . LdBPK_365800.1 156 PLSQYKR|LL 0.213 . LdBPK_365800.1 189 TVCAAVR|RL 0.088 . LdBPK_365800.1 190 VCAAVRR|LI 0.161 . LdBPK_365800.1 201 MAQQQVK|EW 0.065 . LdBPK_365800.1 227 EGVQAGR|LL 0.070 . LdBPK_365800.1 236 ALGVLPR|VF 0.090 . LdBPK_365800.1 246 AYPQQLR|WD 0.082 . LdBPK_365800.1 250 QLRWDGR|GY 0.107 . LdBPK_365800.1 253 WDGRGYR|LR 0.166 . LdBPK_365800.1 255 GRGYRLR|QP 0.108 . LdBPK_365800.1 262 QPAASMR|LA 0.112 . LdBPK_365800.1 265 ASMRLAK|AR 0.206 . LdBPK_365800.1 267 MRLAKAR|DV 0.335 . LdBPK_365800.1 277 DSTSVFR|HP 0.082 . LdBPK_365800.1 298 FVVHLPR|PL 0.080 . LdBPK_365800.1 320 CSVVAFR|YS 0.142 . LdBPK_365800.1 341 TANALPK|RG 0.064 . LdBPK_365800.1 342 ANALPKR|GR 0.154 . LdBPK_365800.1 344 ALPKRGR|VP 0.078 . LdBPK_365800.1 350 RVPCPLR|GR 0.068 . LdBPK_365800.1 352 PCPLRGR|DS 0.103 . LdBPK_365800.1 380 QLCLPVR|RS 0.081 . LdBPK_365800.1 381 LCLPVRR|SD 0.135 . LdBPK_365800.1 390 AYAWLYR|QF 0.070 . LdBPK_365800.1 393 WLYRQFK|GP 0.180 . LdBPK_365800.1 399 KGPSQLR|QH 0.072 . LdBPK_365800.1 403 QLRQHLR|SA 0.294 . LdBPK_365800.1 406 QHLRSAR|AT 0.442 . LdBPK_365800.1 418 FLQLMYR|AP 0.074 . LdBPK_365800.1 434 LHCAFQR|AV 0.161 . LdBPK_365800.1 450 GPAAQVR|CA 0.130 . LdBPK_365800.1 462 VVASGVR|GS 0.091 . LdBPK_365800.1 482 APGDVVR|VD 0.104 . LdBPK_365800.1 498 VPTDCAR|TL 0.084 . LdBPK_365800.1 506 LPIGSSR|FP 0.108 . LdBPK_365800.1 523 GLLQIQR|KL 0.066 . LdBPK_365800.1 524 LLQIQRK|LL 0.097 . LdBPK_365800.1 527 IQRKLLR|CM 0.087 . LdBPK_365800.1 530 KLLRCMK|PG 0.109 . LdBPK_365800.1 536 KPGASVR|DM 0.114 . LdBPK_365800.1 540 SVRDMAR|MH 0.110 . LdBPK_365800.1 547 MHIDETR|AL 0.090 . LdBPK_365800.1 558 LLGVDVR|RA 0.079 . LdBPK_365800.1 559 LGVDVRR|AA 0.175 . LdBPK_365800.1 591 VPLALVR|SC 0.098 . LdBPK_365800.1 616 ELSSVSR|PL 0.102 . LdBPK_365800.1 624 LPTAAAK|EE 0.064 . LdBPK_365800.1 630 KEEVAQR|QR 0.071 . LdBPK_365800.1 632 EVAQRQR|PT 0.089 . LdBPK_365800.1 636 RQRPTPR|IL 0.142 . LdBPK_365800.1 657 YVPSAQR|AA 0.075 . LdBPK_365800.1 665 ALFGLER|AH 0.081 . LdBPK_365800.1 699 EDVDVCK|GG 0.072 . LdBPK_365800.1 706 GGEPLVR|CP 0.081 . LdBPK_365800.1 711 VRCPWSR|GD 0.100 . LdBPK_365800.1 724 ALAAFHR|YH 0.137 . LdBPK_365800.1 763 ATQNVLR|FL 0.138 . LdBPK_365800.1 769 RFLFAQR|VA 0.097 . LdBPK_365800.1 777 AMEGLPK|AK 0.068 . LdBPK_365800.1 779 EGLPKAK|AS 0.060 . LdBPK_365800.1 828 LTATIPK|DI 0.079 . LdBPK_365800.1 838 LIEAVMR|Q- 0.095 . ____________________________^_________________

  • Fasta :-

    >LdBPK_365800.1 ATGCTTCGTCGACTTCGTCGAGCATGGTGTACCGCACCAGCGCAAAGGCATAGTGTGCCG CTCACGTTGGGCTCGACGCGCTGGGTCGGTGGCTCAGCCGCAGTAGCTGAAGAAGTGAGC GCGCAGGAGTACGCGGACCGGCGCAGGCGGTTCCTGGAGTGCCTCCCAGATAATTCGATT GTTCTTCTTCCCGCCGCCGATGAATCGCTATACAGCCACGATATCCTGTGGCCGCATCGT CAAGACTCCTTGTGGTACCACCTGTTTGGCATGCGCGTCCCGATGCGGCGTCAGCTCGCC CCGCCTTCGTCGGCGATCACCGAGGATGTACGGATCACCATCGCGGCCTTTGCCAAGGGC ATGAAGGGCATCCCCACGCAAACCCTCCTCTGTGTGCCGCCCGTCACGACAGACACAGCG ACGCTGGTGTGGGGATCTGAGGCGGTGCCGCTCAGTCAGTACAAACGTCTTCTCTGCGCG GATGCTGATGGTGGTATGCTGTCGCCTTGCACGCACGAGAACGTGGTCACGACGAACGAA GTGGGCACCGTCTGCGCGGCGGTTCGCCGGCTTATCACAGACATGGCACAGCAGCAGGTA AAGGAATGGGCAGAGCACAGCGGCGTCGAGCTATCAACGTTGTCGGGAGGAGGAGGAGGA GAAGGGGTGCAGGCAGGGAGGCTTCTTGCGCTGGGCGTCCTGCCGAGAGTGTTCGCGGCG TATCCGCAACAGCTACGCTGGGATGGAAGAGGCTACCGCCTTCGCCAGCCAGCGGCATCG ATGCGGCTCGCAAAAGCGCGGGATGTAGCCGACAGCACCTCTGTCTTTCGCCATCCACTT GAGGCTTTCTTCTCCACGTTGAGCGCGATGCCCTTTGTGGTGCACCTGCCACGTCCACTC CCTCTTGCAACCGCAGCAGCACCAGGGCAGCAGCCGACCTGCAGCGTAGTCGCCTTCCGC TACTCGGCAGTTGCGGGTCACACCCCTGGTCTTGTGCCCAGCACCGCCAATGCGCTACCT AAGCGAGGCCGCGTGCCCTGCCCCCTACGAGGACGTGATTCTCCGGCTGCCGTCGCCACC GCATCCGCAAGCGCTGACAGCGAGCCGGATGCCACGATGCAGCTCTGCCTGCCCGTTCGT CGCAGTGATGCATACGCGTGGCTGTACCGGCAGTTCAAAGGCCCATCACAGCTACGGCAG CACCTTCGCAGTGCCCGCGCAACAGAGGATGCTTTTCTGCAGCTCATGTACCGCGCCCCC GCGACACTGTCGGAGCACGCGCTGCACTGTGCGTTTCAGCGTGCCGTGTGCGACATTAGC GCGCACGCCGGGCCAGCTGCCCAGGTACGATGCGCGTACATCCCCGTCGTGGCAAGCGGC GTGCGCGGCAGCGAAATCCACTTCACCGACAACGACGGTGTGGCCGCACCGGGTGACGTT GTGCGCGTGGACGCCGGTGTGGAGGTGGACGGCGTCCCCACGGACTGCGCGCGGACACTG CCGATAGGCAGTTCACGCTTTCCCTCCTCGTACGTGCCGCTGTACGAGGGATTGCTCCAG ATTCAGCGCAAGCTGCTCCGGTGCATGAAGCCTGGGGCTTCGGTCCGTGACATGGCTCGG ATGCACATCGACGAAACGCGGGCGTTGCTTTGCTTGCTTGGGGTCGATGTGCGTCGTGCA GCATCCTCGTCAGCCACGCCAAGCCCGTGCCCCCACGAGTCGGCTACTGCAACCTCGTCG CCGGAGCAGCAGGTACCGCTTGCCCTGGTGCGCTCCTGCTTCTGTGCTCACTTGTTCGGC CATTTCTTCGGCCTCGACATCCATGAGGAGCTAAGTAGCGTTTCGCGGCCACTCCCAACG GCAGCGGCAAAGGAAGAGGTCGCGCAGCGGCAGCGGCCGACTCCGCGCATCCTGCAAGGG GGCATGATGCACACTGTTGAGCCTGGCGTCTACGTGCCGAGCGCACAAAGAGCGGCCCTC TTCGGCCTCGAGAGGGCGCACTTACCGATCGCGTTTCACGGTGGCGTTGGCGTGCAAATC GAAGACGACGTTCTCGTCTTGCCTTCCCCCGATGGCGAGGACGTCGATGTATGCAAAGGT GGAGAGCCTCTGGTGCGCTGTCCGTGGAGCCGTGGGGACTACCTCCAGCACGCCCTCGCT GCCTTTCATCGCTACCACGGCAGCGGAGACGCAGGGTTGATGCCCTCCCTGCTAGTGTCT GTGTGCGACGCGCATGTGCCCACAGTATGGGGGGGATGCATGACTGCCGCTACGCAAAAT GTGTTGCGCTTCCTGTTTGCCCAGCGCGTGGCTATGGAAGGGTTACCAAAGGCGAAGGCT TCCGTGGAAACGGACGTGTGCGCCATACAGCAGCAGACATTTGTTCCGAATCCAGCGTAC TCAAACGGGCCACCAGTGCCACACGCAGCAGTCTCGGACTGGTACCCGTACTCGAGCATC GTCTTGACAGCCACTATCCCGAAGGACATTGCGCTTATAGAAGCTGTCATGCGGCAGTGA
  • Download Fasta

  • Fasta :-

    MLRRLRRAWCTAPAQRHSVPLTLGSTRWVGGSAAVAEEVSAQEYADRRRRFLECLPDNSI VLLPAADESLYSHDILWPHRQDSLWYHLFGMRVPMRRQLAPPSSAITEDVRITIAAFAKG MKGIPTQTLLCVPPVTTDTATLVWGSEAVPLSQYKRLLCADADGGMLSPCTHENVVTTNE VGTVCAAVRRLITDMAQQQVKEWAEHSGVELSTLSGGGGGEGVQAGRLLALGVLPRVFAA YPQQLRWDGRGYRLRQPAASMRLAKARDVADSTSVFRHPLEAFFSTLSAMPFVVHLPRPL PLATAAAPGQQPTCSVVAFRYSAVAGHTPGLVPSTANALPKRGRVPCPLRGRDSPAAVAT ASASADSEPDATMQLCLPVRRSDAYAWLYRQFKGPSQLRQHLRSARATEDAFLQLMYRAP ATLSEHALHCAFQRAVCDISAHAGPAAQVRCAYIPVVASGVRGSEIHFTDNDGVAAPGDV VRVDAGVEVDGVPTDCARTLPIGSSRFPSSYVPLYEGLLQIQRKLLRCMKPGASVRDMAR MHIDETRALLCLLGVDVRRAASSSATPSPCPHESATATSSPEQQVPLALVRSCFCAHLFG HFFGLDIHEELSSVSRPLPTAAAKEEVAQRQRPTPRILQGGMMHTVEPGVYVPSAQRAAL FGLERAHLPIAFHGGVGVQIEDDVLVLPSPDGEDVDVCKGGEPLVRCPWSRGDYLQHALA AFHRYHGSGDAGLMPSLLVSVCDAHVPTVWGGCMTAATQNVLRFLFAQRVAMEGLPKAKA SVETDVCAIQQQTFVPNPAYSNGPPVPHAAVSDWYPYSSIVLTATIPKDIALIEAVMRQ

  • title: active site
  • coordinates: H467,D484,D495,H601,E647,E681
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_365800.1534 SKPGASVRDM0.996unspLdBPK_365800.1534 SKPGASVRDM0.996unspLdBPK_365800.1534 SKPGASVRDM0.996unspLdBPK_365800.1562 SRRAASSSAT0.991unspLdBPK_365800.1580 STATSSPEQQ0.993unspLdBPK_365800.1367 SASADSEPDA0.996unspLdBPK_365800.1404 SQHLRSARAT0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India