LdBPK_367060.1 | prolyl endopeptidase

_IDPredictionOTHERSPmTPCS_Position
LdBPK_367060.1OTHER0.6946050.0030580.302337
No Results

  • Fasta :-

    >LdBPK_367060.1 MKSLYPVVRRAATTYQLHGRTIPEPYDYLEDPCNAETKEFVRQQNEAFDAYMKSSNEVRD KIVERVTAMLNYARTSNPSLHAGKYYYQYNTGLQNQSVIMQATSLKDDNPTVFLDPNTLS ADGTTALKAHAWSENEELFAYSLSDKGSDWQYIQVLNAETGEQLPDKLNWAKFSGISWWK NDGFFYQRYPELSEDVDKGAETDSAQNHYVCFHKVGTAQSEDLLILQVPEHPQWILAAEV TDDHEYLVIRVMNGCDPNNLIWIAKLPTTYEELKRPLEFVKVVNTFVAQYIYVGNEGKMF YMTSTKDASRKKIVSINLETTEEKDVVAEQESVLNRAALVKDTLIVVYLEDVKDVMYYRK LHGAAEMKKLDLPLGTITSLFSDYKKDFVSFKVSSFMLPGRSYVMDINNPQGSLTVYKDD VVNGLNVEDYVTVQHFYQSADGTKIPMFIVHKKGSLSPHSPVMLYGYGGFGISLTPSFSP SRIVFLQNLGGVLAIPNIRGGNEYGQLWHDAGRLTKKQNCFTDFVSAAKYLHSNKIGSPA TTAIMGGSNGGLLVAACANQAPDEFSCVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEE DFRVLEKYSPIHNVRPGVKYPAILVVTGDHDDRVVPLHSLKYVATLQHTNPELGGPFLAR VEVAAGHGFGKPTSKIIAETSDMYAFMAKSIGATWHD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_367060.1.fa Sequence name : LdBPK_367060 Sequence length : 697 VALUES OF COMPUTED PARAMETERS Coef20 : 4.251 CoefTot : -0.534 ChDiff : -18 ZoneTo : 23 KR : 4 DE : 0 CleavSite : 30 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.582 1.335 0.259 0.582 MesoH : 0.096 0.415 -0.244 0.295 MuHd_075 : 37.329 27.592 8.588 9.222 MuHd_095 : 29.456 18.972 8.172 7.506 MuHd_100 : 32.578 19.643 7.368 8.698 MuHd_105 : 31.779 21.970 7.512 8.205 Hmax_075 : 15.100 17.100 3.137 5.220 Hmax_095 : 10.588 13.700 1.972 4.463 Hmax_100 : 8.500 9.800 1.549 4.600 Hmax_105 : 4.200 12.000 0.196 4.048 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0652 0.9348 DFMC : 0.1077 0.8923 This protein is probably imported in mitochondria. f(Ser) = 0.0435 f(Arg) = 0.1304 CMi = 0.17212 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 697 LdBPK_367060.1 MKSLYPVVRRAATTYQLHGRTIPEPYDYLEDPCNAETKEFVRQQNEAFDAYMKSSNEVRDKIVERVTAMLNYARTSNPSL 80 HAGKYYYQYNTGLQNQSVIMQATSLKDDNPTVFLDPNTLSADGTTALKAHAWSENEELFAYSLSDKGSDWQYIQVLNAET 160 GEQLPDKLNWAKFSGISWWKNDGFFYQRYPELSEDVDKGAETDSAQNHYVCFHKVGTAQSEDLLILQVPEHPQWILAAEV 240 TDDHEYLVIRVMNGCDPNNLIWIAKLPTTYEELKRPLEFVKVVNTFVAQYIYVGNEGKMFYMTSTKDASRKKIVSINLET 320 TEEKDVVAEQESVLNRAALVKDTLIVVYLEDVKDVMYYRKLHGAAEMKKLDLPLGTITSLFSDYKKDFVSFKVSSFMLPG 400 RSYVMDINNPQGSLTVYKDDVVNGLNVEDYVTVQHFYQSADGTKIPMFIVHKKGSLSPHSPVMLYGYGGFGISLTPSFSP 480 SRIVFLQNLGGVLAIPNIRGGNEYGQLWHDAGRLTKKQNCFTDFVSAAKYLHSNKIGSPATTAIMGGSNGGLLVAACANQ 560 APDEFSCVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEEDFRVLEKYSPIHNVRPGVKYPAILVVTGDHDDRVVPLHSL 640 KYVATLQHTNPELGGPFLARVEVAAGHGFGKPTSKIIAETSDMYAFMAKSIGATWHD 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ......................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_367060.1 2 -----MK|SL 0.097 . LdBPK_367060.1 9 SLYPVVR|RA 0.096 . LdBPK_367060.1 10 LYPVVRR|AA 0.213 . LdBPK_367060.1 20 TYQLHGR|TI 0.095 . LdBPK_367060.1 38 PCNAETK|EF 0.070 . LdBPK_367060.1 42 ETKEFVR|QQ 0.089 . LdBPK_367060.1 53 AFDAYMK|SS 0.075 . LdBPK_367060.1 59 KSSNEVR|DK 0.160 . LdBPK_367060.1 61 SNEVRDK|IV 0.113 . LdBPK_367060.1 65 RDKIVER|VT 0.081 . LdBPK_367060.1 74 AMLNYAR|TS 0.094 . LdBPK_367060.1 84 PSLHAGK|YY 0.081 . LdBPK_367060.1 106 MQATSLK|DD 0.071 . LdBPK_367060.1 128 DGTTALK|AH 0.056 . LdBPK_367060.1 146 AYSLSDK|GS 0.085 . LdBPK_367060.1 167 GEQLPDK|LN 0.073 . LdBPK_367060.1 172 DKLNWAK|FS 0.076 . LdBPK_367060.1 180 SGISWWK|ND 0.060 . LdBPK_367060.1 188 DGFFYQR|YP 0.084 . LdBPK_367060.1 198 LSEDVDK|GA 0.079 . LdBPK_367060.1 214 HYVCFHK|VG 0.063 . LdBPK_367060.1 250 HEYLVIR|VM 0.081 . LdBPK_367060.1 265 NLIWIAK|LP 0.067 . LdBPK_367060.1 274 TTYEELK|RP 0.056 . LdBPK_367060.1 275 TYEELKR|PL 0.166 . LdBPK_367060.1 281 RPLEFVK|VV 0.077 . LdBPK_367060.1 298 YVGNEGK|MF 0.057 . LdBPK_367060.1 306 FYMTSTK|DA 0.080 . LdBPK_367060.1 310 STKDASR|KK 0.081 . LdBPK_367060.1 311 TKDASRK|KI 0.091 . LdBPK_367060.1 312 KDASRKK|IV 0.228 . LdBPK_367060.1 324 LETTEEK|DV 0.086 . LdBPK_367060.1 336 QESVLNR|AA 0.114 . LdBPK_367060.1 341 NRAALVK|DT 0.082 . LdBPK_367060.1 353 VYLEDVK|DV 0.066 . LdBPK_367060.1 359 KDVMYYR|KL 0.102 . LdBPK_367060.1 360 DVMYYRK|LH 0.099 . LdBPK_367060.1 368 HGAAEMK|KL 0.071 . LdBPK_367060.1 369 GAAEMKK|LD 0.085 . LdBPK_367060.1 385 SLFSDYK|KD 0.063 . LdBPK_367060.1 386 LFSDYKK|DF 0.107 . LdBPK_367060.1 392 KDFVSFK|VS 0.073 . LdBPK_367060.1 401 SFMLPGR|SY 0.115 . LdBPK_367060.1 418 GSLTVYK|DD 0.071 . LdBPK_367060.1 444 QSADGTK|IP 0.061 . LdBPK_367060.1 452 PMFIVHK|KG 0.062 . LdBPK_367060.1 453 MFIVHKK|GS 0.093 . LdBPK_367060.1 482 PSFSPSR|IV 0.099 . LdBPK_367060.1 499 LAIPNIR|GG 0.080 . LdBPK_367060.1 513 LWHDAGR|LT 0.100 . LdBPK_367060.1 516 DAGRLTK|KQ 0.099 . LdBPK_367060.1 517 AGRLTKK|QN 0.095 . LdBPK_367060.1 529 DFVSAAK|YL 0.067 . LdBPK_367060.1 535 KYLHSNK|IG 0.067 . LdBPK_367060.1 579 GVLDMFK|FH 0.058 . LdBPK_367060.1 582 DMFKFHK|FT 0.074 . LdBPK_367060.1 603 DEEEDFR|VL 0.083 . LdBPK_367060.1 607 DFRVLEK|YS 0.062 . LdBPK_367060.1 615 SPIHNVR|PG 0.089 . LdBPK_367060.1 619 NVRPGVK|YP 0.062 . LdBPK_367060.1 633 TGDHDDR|VV 0.073 . LdBPK_367060.1 641 VPLHSLK|YV 0.088 . LdBPK_367060.1 660 GGPFLAR|VE 0.107 . LdBPK_367060.1 671 AGHGFGK|PT 0.090 . LdBPK_367060.1 675 FGKPTSK|II 0.065 . LdBPK_367060.1 689 MYAFMAK|SI 0.135 . ____________________________^_________________

  • Fasta :-

    >LdBPK_367060.1 ATGAAGTCCCTCTACCCCGTCGTCCGCCGTGCGGCTACGACCTACCAGCTGCACGGCCGC ACAATCCCGGAGCCGTACGACTACCTCGAGGACCCATGTAATGCCGAGACGAAGGAGTTC GTGCGGCAGCAAAACGAGGCATTCGATGCGTACATGAAGTCCTCCAACGAGGTCCGAGAC AAGATAGTGGAGCGAGTGACGGCGATGCTCAACTACGCGCGCACAAGTAACCCGAGTCTG CACGCTGGCAAGTATTACTATCAGTACAACACCGGCCTGCAAAACCAGAGCGTCATCATG CAGGCGACGTCTCTCAAGGACGACAATCCGACTGTCTTTCTCGACCCGAACACTCTCAGC GCCGACGGCACCACTGCTCTCAAGGCCCACGCTTGGAGCGAGAACGAGGAGCTGTTTGCC TACAGCCTGAGCGACAAGGGAAGCGACTGGCAGTACATCCAGGTACTCAACGCGGAGACG GGGGAACAACTTCCCGACAAGTTGAACTGGGCGAAGTTTTCGGGCATCTCGTGGTGGAAA AATGACGGCTTCTTCTACCAGCGCTATCCCGAGCTCAGCGAGGACGTCGACAAGGGCGCC GAGACGGACTCGGCGCAGAATCACTACGTGTGCTTCCACAAGGTCGGGACTGCGCAGTCG GAGGATTTGCTCATTCTGCAGGTGCCCGAGCATCCCCAGTGGATCTTAGCGGCCGAGGTG ACGGACGACCACGAGTACCTCGTCATCCGCGTCATGAACGGGTGTGATCCGAACAACCTT ATTTGGATTGCAAAGCTGCCCACCACCTACGAGGAGCTGAAGAGGCCGCTGGAGTTCGTG AAGGTGGTAAACACGTTCGTCGCCCAGTACATCTATGTCGGCAACGAAGGCAAGATGTTT TACATGACGAGCACCAAGGATGCTTCGCGCAAAAAGATCGTTTCCATTAACCTTGAAACG ACCGAGGAAAAGGATGTCGTCGCTGAGCAGGAGTCAGTGCTGAACCGTGCTGCGCTTGTG AAGGACACACTGATCGTTGTGTACCTCGAGGACGTCAAGGACGTGATGTACTACCGCAAG CTGCACGGGGCGGCGGAGATGAAGAAATTGGATCTGCCGCTCGGCACCATCACGTCCTTA TTTTCTGACTATAAGAAGGACTTTGTCTCCTTCAAGGTCTCCTCGTTCATGTTGCCCGGT CGCTCCTATGTCATGGACATCAACAACCCGCAGGGCTCGCTGACTGTCTACAAGGACGAC GTAGTGAACGGTCTCAACGTCGAAGACTACGTCACTGTGCAGCACTTTTACCAATCTGCT GATGGCACGAAGATTCCGATGTTCATCGTGCACAAGAAGGGGTCCTTGTCCCCCCACTCA CCGGTCATGCTTTACGGCTACGGTGGTTTCGGCATTTCGCTGACCCCCAGCTTCAGCCCG TCGCGCATCGTCTTTCTACAGAACCTCGGCGGCGTTCTCGCCATTCCGAACATTCGCGGC GGCAACGAGTACGGCCAGTTGTGGCACGACGCCGGGCGCCTTACGAAGAAGCAAAACTGT TTCACCGATTTTGTCTCCGCCGCCAAATACCTCCACAGCAACAAAATTGGCTCCCCTGCC ACGACGGCCATCATGGGCGGCTCCAACGGCGGCCTCCTCGTCGCTGCCTGCGCCAATCAG GCCCCTGACGAGTTCTCGTGCGTCGTGTGCCAAGTAGGCGTCCTTGACATGTTCAAGTTT CACAAGTTCACCATCGGCCATGCTTGGATCTCCGACTACGGCAACCCAGATGAGGAGGAG GACTTCAGGGTACTGGAGAAGTACAGCCCCATCCACAATGTGCGCCCCGGCGTCAAATAC CCAGCCATCCTAGTGGTGACCGGTGACCATGATGATCGCGTGGTGCCGCTGCATTCGCTC AAGTACGTGGCCACGCTGCAGCACACGAACCCGGAGCTGGGTGGTCCCTTCCTGGCGCGT GTGGAGGTGGCTGCAGGTCACGGCTTTGGCAAGCCCACGAGCAAGATCATCGCCGAGACG TCCGACATGTACGCCTTCATGGCGAAGAGCATTGGTGCAACGTGGCACGACTGA
  • Download Fasta

  • Fasta :-

    MKSLYPVVRRAATTYQLHGRTIPEPYDYLEDPCNAETKEFVRQQNEAFDAYMKSSNEVRD KIVERVTAMLNYARTSNPSLHAGKYYYQYNTGLQNQSVIMQATSLKDDNPTVFLDPNTLS ADGTTALKAHAWSENEELFAYSLSDKGSDWQYIQVLNAETGEQLPDKLNWAKFSGISWWK NDGFFYQRYPELSEDVDKGAETDSAQNHYVCFHKVGTAQSEDLLILQVPEHPQWILAAEV TDDHEYLVIRVMNGCDPNNLIWIAKLPTTYEELKRPLEFVKVVNTFVAQYIYVGNEGKMF YMTSTKDASRKKIVSINLETTEEKDVVAEQESVLNRAALVKDTLIVVYLEDVKDVMYYRK LHGAAEMKKLDLPLGTITSLFSDYKKDFVSFKVSSFMLPGRSYVMDINNPQGSLTVYKDD VVNGLNVEDYVTVQHFYQSADGTKIPMFIVHKKGSLSPHSPVMLYGYGGFGISLTPSFSP SRIVFLQNLGGVLAIPNIRGGNEYGQLWHDAGRLTKKQNCFTDFVSAAKYLHSNKIGSPA TTAIMGGSNGGLLVAACANQAPDEFSCVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEE DFRVLEKYSPIHNVRPGVKYPAILVVTGDHDDRVVPLHSLKYVATLQHTNPELGGPFLAR VEVAAGHGFGKPTSKIIAETSDMYAFMAKSIGATWHD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LdBPK_367060.1457 SKGSLSPHSP0.994unspLdBPK_367060.1457 SKGSLSPHSP0.994unspLdBPK_367060.1457 SKGSLSPHSP0.994unspLdBPK_367060.1104 SMQATSLKDD0.996unspLdBPK_367060.1309 STKDASRKKI0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India