LmjF.01.0830 | metallo-peptidase, Clan MA(E), Family M3

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.01.0830OTHER0.9999170.0000320.000051
No Results

  • Fasta :-

    >LmjF.01.0830 MSANPLLQQSPLQYQHPPFDQITMEHYAPAFEQGMAEQMAEIEAIKSNPDAPTLENTVVA LERSGAQLERARLVFQNLCSAHTNPEMQNPEQACAPKFSVHTDKIYLDGALYNRIKAVWD ERASLAGEDLRLVEHYEREFRKAGAGLHDADKEKLKQVNERLATLESDFAKKVMGTRKTA SLAVDNVAELEGLSEDEIATAQMEAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF EASVQRAARGDENDTSAIIAEIAQLRLKKAKLLGRKCFAECQLQNQMADPASAEALLHDM GNAAASKAKKEAADIKQMIREEGGDFELAPWDWRYYAERVRKQRHDLDENEAKPYFELNN VLERGVFYTAAKLYGVTMRRRTDLPVYHPDVLSFEMFDCTGGSLAIFRLDPYARASKRGG AWMTFYVCQSPLLGQKPVVYNVLNIVKPAEGKPTLLSRSDVTTLFHEFGHGLHGMLSNLK CSTLSGTSVARDFLEFPSQINEHWAMYDAVLKNYAPHYETKEPIPQALVDRMKAAETNGA GFHTIEVVKAAYLDLCWHLVAEETAFLPPAQMEEAAMRSFGVGMTEAPPRYHSGCFMHTF SGGYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLRACVLSVGNSVDANVAYEKFA GRKANMKAFLRINGLLDE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/911 Sequence name : 911 Sequence length : 678 VALUES OF COMPUTED PARAMETERS Coef20 : 2.827 CoefTot : -1.431 ChDiff : -16 ZoneTo : 19 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.971 1.224 0.099 0.515 MesoH : -0.275 0.206 -0.349 0.225 MuHd_075 : 18.563 16.500 4.788 4.332 MuHd_095 : 13.165 10.268 5.512 3.190 MuHd_100 : 8.760 7.119 4.553 2.281 MuHd_105 : 7.180 8.128 3.003 1.741 Hmax_075 : 7.875 5.337 -1.054 3.150 Hmax_095 : 6.388 2.888 -0.011 2.590 Hmax_100 : 6.700 4.100 0.106 3.140 Hmax_105 : 4.083 4.083 -1.016 2.228 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9774 0.0226 DFMC : 0.9689 0.0311
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 678 LmjF.01.0830 MSANPLLQQSPLQYQHPPFDQITMEHYAPAFEQGMAEQMAEIEAIKSNPDAPTLENTVVALERSGAQLERARLVFQNLCS 80 AHTNPEMQNPEQACAPKFSVHTDKIYLDGALYNRIKAVWDERASLAGEDLRLVEHYEREFRKAGAGLHDADKEKLKQVNE 160 RLATLESDFAKKVMGTRKTASLAVDNVAELEGLSEDEIATAQMEAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF 240 EASVQRAARGDENDTSAIIAEIAQLRLKKAKLLGRKCFAECQLQNQMADPASAEALLHDMGNAAASKAKKEAADIKQMIR 320 EEGGDFELAPWDWRYYAERVRKQRHDLDENEAKPYFELNNVLERGVFYTAAKLYGVTMRRRTDLPVYHPDVLSFEMFDCT 400 GGSLAIFRLDPYARASKRGGAWMTFYVCQSPLLGQKPVVYNVLNIVKPAEGKPTLLSRSDVTTLFHEFGHGLHGMLSNLK 480 CSTLSGTSVARDFLEFPSQINEHWAMYDAVLKNYAPHYETKEPIPQALVDRMKAAETNGAGFHTIEVVKAAYLDLCWHLV 560 AEETAFLPPAQMEEAAMRSFGVGMTEAPPRYHSGCFMHTFSGGYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLR 640 ACVLSVGNSVDANVAYEKFAGRKANMKAFLRINGLLDE 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.01.0830 46 AEIEAIK|SN 0.075 . LmjF.01.0830 63 TVVALER|SG 0.136 . LmjF.01.0830 70 SGAQLER|AR 0.080 . LmjF.01.0830 72 AQLERAR|LV 0.121 . LmjF.01.0830 97 EQACAPK|FS 0.067 . LmjF.01.0830 104 FSVHTDK|IY 0.067 . LmjF.01.0830 114 DGALYNR|IK 0.067 . LmjF.01.0830 116 ALYNRIK|AV 0.098 . LmjF.01.0830 122 KAVWDER|AS 0.095 . LmjF.01.0830 131 LAGEDLR|LV 0.137 . LmjF.01.0830 138 LVEHYER|EF 0.085 . LmjF.01.0830 141 HYEREFR|KA 0.488 . LmjF.01.0830 142 YEREFRK|AG 0.083 . LmjF.01.0830 152 GLHDADK|EK 0.063 . LmjF.01.0830 154 HDADKEK|LK 0.070 . LmjF.01.0830 156 ADKEKLK|QV 0.093 . LmjF.01.0830 161 LKQVNER|LA 0.100 . LmjF.01.0830 171 LESDFAK|KV 0.120 . LmjF.01.0830 172 ESDFAKK|VM 0.092 . LmjF.01.0830 177 KKVMGTR|KT 0.074 . LmjF.01.0830 178 KVMGTRK|TA 0.110 . LmjF.01.0830 213 SLGHPGK|YA 0.096 . LmjF.01.0830 231 PLLASLR|SR 0.103 . LmjF.01.0830 233 LASLRSR|ET 0.112 . LmjF.01.0830 236 LRSRETR|RR 0.219 . LmjF.01.0830 237 RSRETRR|RL 0.144 . LmjF.01.0830 238 SRETRRR|LF 0.185 . LmjF.01.0830 246 FEASVQR|AA 0.130 . LmjF.01.0830 249 SVQRAAR|GD 0.337 . LmjF.01.0830 266 AEIAQLR|LK 0.084 . LmjF.01.0830 268 IAQLRLK|KA 0.059 . LmjF.01.0830 269 AQLRLKK|AK 0.242 . LmjF.01.0830 271 LRLKKAK|LL 0.094 . LmjF.01.0830 275 KAKLLGR|KC 0.081 . LmjF.01.0830 276 AKLLGRK|CF 0.069 . LmjF.01.0830 307 GNAAASK|AK 0.066 . LmjF.01.0830 309 AAASKAK|KE 0.076 . LmjF.01.0830 310 AASKAKK|EA 0.188 . LmjF.01.0830 316 KEAADIK|QM 0.075 . LmjF.01.0830 320 DIKQMIR|EE 0.079 . LmjF.01.0830 334 LAPWDWR|YY 0.077 . LmjF.01.0830 339 WRYYAER|VR 0.078 . LmjF.01.0830 341 YYAERVR|KQ 0.076 . LmjF.01.0830 342 YAERVRK|QR 0.209 . LmjF.01.0830 344 ERVRKQR|HD 0.299 . LmjF.01.0830 353 LDENEAK|PY 0.070 . LmjF.01.0830 364 LNNVLER|GV 0.119 . LmjF.01.0830 372 VFYTAAK|LY 0.064 . LmjF.01.0830 379 LYGVTMR|RR 0.085 . LmjF.01.0830 380 YGVTMRR|RT 0.091 . LmjF.01.0830 381 GVTMRRR|TD 0.104 . LmjF.01.0830 408 GSLAIFR|LD 0.078 . LmjF.01.0830 414 RLDPYAR|AS 0.124 . LmjF.01.0830 417 PYARASK|RG 0.106 . LmjF.01.0830 418 YARASKR|GG 0.204 . LmjF.01.0830 436 SPLLGQK|PV 0.064 . LmjF.01.0830 447 NVLNIVK|PA 0.066 . LmjF.01.0830 452 VKPAEGK|PT 0.059 . LmjF.01.0830 458 KPTLLSR|SD 0.132 . LmjF.01.0830 480 GMLSNLK|CS 0.056 . LmjF.01.0830 491 SGTSVAR|DF 0.106 . LmjF.01.0830 512 MYDAVLK|NY 0.059 . LmjF.01.0830 521 APHYETK|EP 0.073 . LmjF.01.0830 531 PQALVDR|MK 0.102 . LmjF.01.0830 533 ALVDRMK|AA 0.091 . LmjF.01.0830 549 HTIEVVK|AA 0.070 . LmjF.01.0830 578 MEEAAMR|SF 0.200 . LmjF.01.0830 590 MTEAPPR|YH 0.149 . LmjF.01.0830 615 YVYQWAR|VL 0.088 . LmjF.01.0830 633 ENGGLTR|EN 0.116 . LmjF.01.0830 640 ENGDHLR|AC 0.082 . LmjF.01.0830 658 ANVAYEK|FA 0.089 . LmjF.01.0830 662 YEKFAGR|KA 0.086 . LmjF.01.0830 663 EKFAGRK|AN 0.086 . LmjF.01.0830 667 GRKANMK|AF 0.068 . LmjF.01.0830 671 NMKAFLR|IN 0.080 . ____________________________^_________________

  • Fasta :-

    >LmjF.01.0830 ATGTCCGCCAACCCGCTGCTTCAGCAGAGCCCTCTGCAGTACCAACACCCGCCCTTTGAC CAGATCACCATGGAGCACTACGCACCCGCTTTCGAGCAGGGCATGGCGGAGCAGATGGCG GAGATCGAGGCGATCAAGTCCAACCCTGACGCGCCCACCCTTGAAAACACAGTGGTGGCA CTGGAGCGGAGCGGGGCGCAGCTTGAGCGCGCACGTCTTGTCTTCCAAAACCTCTGCTCT GCACACACGAACCCGGAGATGCAAAATCCCGAGCAGGCCTGCGCCCCAAAGTTCTCCGTC CACACAGACAAGATCTACCTCGACGGTGCCTTGTACAACCGCATCAAGGCCGTGTGGGAC GAGCGTGCCAGTCTCGCTGGTGAAGACTTGCGGCTGGTGGAACACTACGAGAGGGAGTTT CGCAAGGCCGGCGCCGGCCTTCACGACGCAGACAAGGAGAAGCTGAAACAGGTAAATGAG CGCCTCGCTACCCTCGAGAGTGATTTTGCCAAGAAGGTGATGGGCACGCGCAAGACCGCC TCGCTCGCCGTGGATAACGTTGCCGAGCTGGAGGGCCTCAGCGAGGACGAGATCGCGACG GCTCAGATGGAGGCGGAGAGCCTCGGCCACCCCGGAAAGTACGCATTGATTATCGTGAAC ACGACTCAGCAGCCACTGCTAGCGTCTCTGAGGAGCCGCGAGACACGCCGCCGCCTGTTC GAGGCGAGCGTGCAGCGCGCCGCACGCGGTGACGAGAATGACACGAGCGCCATCATCGCG GAGATTGCGCAGCTGCGGCTGAAGAAGGCGAAGCTGCTCGGCAGGAAGTGCTTTGCGGAG TGCCAGCTGCAGAACCAGATGGCCGACCCGGCGTCCGCGGAGGCCTTGCTGCACGATATG GGCAATGCGGCGGCGTCGAAGGCGAAGAAGGAAGCGGCTGACATCAAGCAGATGATTCGC GAGGAGGGTGGGGACTTTGAGCTGGCGCCCTGGGACTGGAGGTACTACGCGGAGCGAGTG CGCAAGCAGCGGCACGACCTCGACGAGAACGAGGCGAAGCCATACTTTGAGCTAAACAAC GTGCTTGAGCGGGGCGTGTTCTACACGGCGGCGAAACTGTACGGCGTGACGATGCGGCGG CGCACGGATCTGCCGGTGTACCACCCCGACGTGCTGTCGTTTGAGATGTTTGACTGCACG GGTGGGTCTCTTGCCATTTTCCGCCTTGACCCCTACGCGCGCGCAAGCAAGCGCGGTGGT GCGTGGATGACCTTCTATGTTTGCCAGAGCCCCCTCCTTGGCCAGAAGCCGGTCGTGTAC AATGTGCTCAACATTGTGAAGCCGGCTGAAGGCAAGCCGACCTTGCTGAGCCGCAGTGAC GTGACGACGCTCTTCCATGAGTTCGGCCACGGACTGCACGGCATGCTAAGCAACCTCAAG TGCTCGACTCTTTCCGGTACAAGTGTCGCCCGCGACTTCCTCGAGTTTCCATCGCAGATC AACGAGCACTGGGCAATGTACGACGCCGTGTTGAAGAACTACGCCCCTCACTACGAAACC AAGGAGCCGATCCCGCAGGCACTGGTGGATCGCATGAAGGCGGCCGAGACAAACGGCGCC GGCTTCCACACCATTGAGGTGGTCAAGGCGGCGTACCTCGATCTCTGCTGGCACCTGGTT GCGGAGGAAACGGCTTTTCTACCACCGGCACAGATGGAGGAGGCGGCGATGAGGTCCTTC GGTGTTGGGATGACCGAAGCGCCGCCGCGCTACCACAGCGGGTGCTTCATGCACACTTTC TCTGGCGGATATGCCTCGAACTACTACGTGTACCAGTGGGCGCGTGTGCTGGACTGCGAC GGGTTCGAGTGGTTCCTGGAGAACGGCGGGCTGACGCGCGAGAACGGTGACCACCTGCGT GCGTGCGTGCTCTCTGTGGGCAACTCAGTGGACGCGAACGTTGCGTACGAGAAGTTTGCC GGCCGCAAGGCAAACATGAAGGCGTTCCTCCGCATCAACGGCCTGCTGGACGAATAG
  • Download Fasta

  • Fasta :-

    MSANPLLQQSPLQYQHPPFDQITMEHYAPAFEQGMAEQMAEIEAIKSNPDAPTLENTVVA LERSGAQLERARLVFQNLCSAHTNPEMQNPEQACAPKFSVHTDKIYLDGALYNRIKAVWD ERASLAGEDLRLVEHYEREFRKAGAGLHDADKEKLKQVNERLATLESDFAKKVMGTRKTA SLAVDNVAELEGLSEDEIATAQMEAESLGHPGKYALIIVNTTQQPLLASLRSRETRRRLF EASVQRAARGDENDTSAIIAEIAQLRLKKAKLLGRKCFAECQLQNQMADPASAEALLHDM GNAAASKAKKEAADIKQMIREEGGDFELAPWDWRYYAERVRKQRHDLDENEAKPYFELNN VLERGVFYTAAKLYGVTMRRRTDLPVYHPDVLSFEMFDCTGGSLAIFRLDPYARASKRGG AWMTFYVCQSPLLGQKPVVYNVLNIVKPAEGKPTLLSRSDVTTLFHEFGHGLHGMLSNLK CSTLSGTSVARDFLEFPSQINEHWAMYDAVLKNYAPHYETKEPIPQALVDRMKAAETNGA GFHTIEVVKAAYLDLCWHLVAEETAFLPPAQMEEAAMRSFGVGMTEAPPRYHSGCFMHTF SGGYASNYYVYQWARVLDCDGFEWFLENGGLTRENGDHLRACVLSVGNSVDANVAYEKFA GRKANMKAFLRINGLLDE

  • title: Zn binding site
  • coordinates: H466,H470,E495
No Results
No Results
IDSitePeptideScoreMethod
LmjF.01.0830416 SYARASKRGG0.995unsp

LmjF.01.0830      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India