LmjF.04.0450 | cysteine peptidase, Clan CA, family C2, putative

_IDPredictionOTHERSPmTPCS_Position
LmjF.04.0450OTHER0.9999860.0000140.000000
No Results

  • Fasta :-

    >LmjF.04.0450 MSYPPTEVDVISNDSLFSDSVEFDAAEKPIAAEDVHGVADPNDQPLGHDDRGLPTDDAVM RAGSGYPEEEPAGPPPVTNAFMKPRKTATKPPREWVPVNLQVPEEDPEDEFDIGTAQKPV YESPETPAATGGAAAPKVRFVNGEPDITGEVTNCFEEPGLLYRIVDRPNKTWAFYNDSRS FEVHVVCTFGKHSKITPLENTKMTRDENTGEYVMELTVYPGETEPFIKGFVNGFASKLSA LPLSQEYFQARSEAQNQQVVQVEMDAIRAIAGDETDAERVLQICLENGLPFVDLSFPPVQ SSIESGAAKPFKRLPWGRPRMYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAVATL AEDPTVVMQVFRHPKGADSARCERAIGAYRVSFNKNGLWRSILVDDYFPVIAGAPAFAHS RDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDMTGFPAMRIDEMVSKATVHSGRDL ESRMIQWQRKGYQAILTTPGKAPAIPAEAQSSPDFSDQPEMEEAFAGTGFLPGHAYSVLD VKEFQKGQIRLICLRNPWVHGSGWTRAWAWDALEWQQHRDIATACGFSKHKGDTSIVWMT FEDALKYFIGGGVLFCARAAHDARVPITFADCKPGAVFQVSVKAPMDVTFILSNMDHRGM HVDEAGAAESDPNNMDYPAVMLSLAAPVPKETDVYQVVQNSSTDMTQPSDNAWLFLQARE IAMTCHLEPSTAPYLLIPRLMEGDETVGNGNGGGEDMRDFVHPIYYVNDYAHLSRSASSV KAKEIAVTIGFEADGEIGDNVIVAMCKIGEGNAVFENFPKFPTDDVEPHEEEMYFQTKES NCGYAQEKAGTAIC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/635 Sequence name : 635 Sequence length : 854 VALUES OF COMPUTED PARAMETERS Coef20 : 3.483 CoefTot : -0.551 ChDiff : -51 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.818 1.306 0.101 0.598 MesoH : -0.344 0.472 -0.301 0.250 MuHd_075 : 24.387 15.902 5.981 3.949 MuHd_095 : 13.127 7.688 3.522 2.076 MuHd_100 : 13.961 6.320 3.514 1.486 MuHd_105 : 12.477 5.757 3.236 1.801 Hmax_075 : 12.483 8.750 1.371 3.535 Hmax_095 : 12.900 11.200 1.762 4.000 Hmax_100 : 10.700 6.600 1.020 3.020 Hmax_105 : 5.600 6.183 -0.800 3.302 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9671 0.0329 DFMC : 0.9573 0.0427
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 854 LmjF.04.0450 MSYPPTEVDVISNDSLFSDSVEFDAAEKPIAAEDVHGVADPNDQPLGHDDRGLPTDDAVMRAGSGYPEEEPAGPPPVTNA 80 FMKPRKTATKPPREWVPVNLQVPEEDPEDEFDIGTAQKPVYESPETPAATGGAAAPKVRFVNGEPDITGEVTNCFEEPGL 160 LYRIVDRPNKTWAFYNDSRSFEVHVVCTFGKHSKITPLENTKMTRDENTGEYVMELTVYPGETEPFIKGFVNGFASKLSA 240 LPLSQEYFQARSEAQNQQVVQVEMDAIRAIAGDETDAERVLQICLENGLPFVDLSFPPVQSSIESGAAKPFKRLPWGRPR 320 MYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAVATLAEDPTVVMQVFRHPKGADSARCERAIGAYRVSFNKNGLWR 400 SILVDDYFPVIAGAPAFAHSRDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDMTGFPAMRIDEMVSKATVHSGRDL 480 ESRMIQWQRKGYQAILTTPGKAPAIPAEAQSSPDFSDQPEMEEAFAGTGFLPGHAYSVLDVKEFQKGQIRLICLRNPWVH 560 GSGWTRAWAWDALEWQQHRDIATACGFSKHKGDTSIVWMTFEDALKYFIGGGVLFCARAAHDARVPITFADCKPGAVFQV 640 SVKAPMDVTFILSNMDHRGMHVDEAGAAESDPNNMDYPAVMLSLAAPVPKETDVYQVVQNSSTDMTQPSDNAWLFLQARE 720 IAMTCHLEPSTAPYLLIPRLMEGDETVGNGNGGGEDMRDFVHPIYYVNDYAHLSRSASSVKAKEIAVTIGFEADGEIGDN 800 VIVAMCKIGEGNAVFENFPKFPTDDVEPHEEEMYFQTKESNCGYAQEKAGTAIC 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ...................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.04.0450 28 EFDAAEK|PI 0.060 . LmjF.04.0450 51 PLGHDDR|GL 0.088 . LmjF.04.0450 61 TDDAVMR|AG 0.114 . LmjF.04.0450 83 VTNAFMK|PR 0.071 . LmjF.04.0450 85 NAFMKPR|KT 0.118 . LmjF.04.0450 86 AFMKPRK|TA 0.094 . LmjF.04.0450 90 PRKTATK|PP 0.065 . LmjF.04.0450 93 TATKPPR|EW 0.122 . LmjF.04.0450 118 DIGTAQK|PV 0.082 . LmjF.04.0450 137 GGAAAPK|VR 0.063 . LmjF.04.0450 139 AAAPKVR|FV 0.199 . LmjF.04.0450 163 EPGLLYR|IV 0.121 . LmjF.04.0450 167 LYRIVDR|PN 0.083 . LmjF.04.0450 170 IVDRPNK|TW 0.097 . LmjF.04.0450 179 AFYNDSR|SF 0.122 . LmjF.04.0450 191 VVCTFGK|HS 0.060 . LmjF.04.0450 194 TFGKHSK|IT 0.065 . LmjF.04.0450 202 TPLENTK|MT 0.071 . LmjF.04.0450 205 ENTKMTR|DE 0.126 . LmjF.04.0450 228 ETEPFIK|GF 0.070 . LmjF.04.0450 237 VNGFASK|LS 0.058 . LmjF.04.0450 251 QEYFQAR|SE 0.163 . LmjF.04.0450 268 VEMDAIR|AI 0.097 . LmjF.04.0450 279 DETDAER|VL 0.074 . LmjF.04.0450 309 IESGAAK|PF 0.070 . LmjF.04.0450 312 GAAKPFK|RL 0.081 . LmjF.04.0450 313 AAKPFKR|LP 0.166 . LmjF.04.0450 318 KRLPWGR|PR 0.100 . LmjF.04.0450 320 LPWGRPR|MY 0.101 . LmjF.04.0450 324 RPRMYVK|PE 0.064 . LmjF.04.0450 332 ELHDQIR|LF 0.079 . LmjF.04.0450 335 DQIRLFR|NR 0.147 . LmjF.04.0450 337 IRLFRNR|IC 0.098 . LmjF.04.0450 372 VVMQVFR|HP 0.091 . LmjF.04.0450 375 QVFRHPK|GA 0.232 . LmjF.04.0450 381 KGADSAR|CE 0.130 . LmjF.04.0450 384 DSARCER|AI 0.444 . LmjF.04.0450 390 RAIGAYR|VS 0.077 . LmjF.04.0450 395 YRVSFNK|NG 0.053 . LmjF.04.0450 400 NKNGLWR|SI 0.120 . LmjF.04.0450 421 PAFAHSR|DL 0.111 . LmjF.04.0450 433 WPAVLEK|AF 0.081 . LmjF.04.0450 437 LEKAFAK|MH 0.078 . LmjF.04.0450 464 TGFPAMR|ID 0.088 . LmjF.04.0450 471 IDEMVSK|AT 0.072 . LmjF.04.0450 478 ATVHSGR|DL 0.133 . LmjF.04.0450 483 GRDLESR|MI 0.133 . LmjF.04.0450 489 RMIQWQR|KG 0.099 . LmjF.04.0450 490 MIQWQRK|GY 0.143 . LmjF.04.0450 501 ILTTPGK|AP 0.056 . LmjF.04.0450 542 YSVLDVK|EF 0.062 . LmjF.04.0450 546 DVKEFQK|GQ 0.060 . LmjF.04.0450 550 FQKGQIR|LI 0.079 . LmjF.04.0450 555 IRLICLR|NP 0.082 . LmjF.04.0450 566 HGSGWTR|AW 0.094 . LmjF.04.0450 579 LEWQQHR|DI 0.117 . LmjF.04.0450 589 TACGFSK|HK 0.074 . LmjF.04.0450 591 CGFSKHK|GD 0.069 . LmjF.04.0450 606 TFEDALK|YF 0.068 . LmjF.04.0450 618 GVLFCAR|AA 0.119 . LmjF.04.0450 624 RAAHDAR|VP 0.088 . LmjF.04.0450 633 ITFADCK|PG 0.059 . LmjF.04.0450 643 VFQVSVK|AP 0.065 . LmjF.04.0450 658 LSNMDHR|GM 0.115 . LmjF.04.0450 690 LAAPVPK|ET 0.083 . LmjF.04.0450 719 WLFLQAR|EI 0.087 . LmjF.04.0450 739 PYLLIPR|LM 0.071 . LmjF.04.0450 758 GGGEDMR|DF 0.092 . LmjF.04.0450 775 DYAHLSR|SA 0.155 . LmjF.04.0450 781 RSASSVK|AK 0.079 . LmjF.04.0450 783 ASSVKAK|EI 0.102 . LmjF.04.0450 807 VIVAMCK|IG 0.061 . LmjF.04.0450 820 VFENFPK|FP 0.065 . LmjF.04.0450 838 EMYFQTK|ES 0.069 . LmjF.04.0450 848 CGYAQEK|AG 0.064 . ____________________________^_________________

  • Fasta :-

    >LmjF.04.0450 ATGTCGTACCCACCGACGGAAGTGGATGTGATCAGCAACGACAGCCTCTTCTCCGACTCT GTCGAGTTCGACGCAGCGGAGAAGCCGATCGCTGCCGAGGATGTCCATGGCGTTGCTGAC CCGAACGACCAGCCGCTTGGGCACGACGACCGCGGCCTGCCCACGGATGATGCGGTAATG CGCGCCGGCTCCGGGTACCCTGAGGAAGAGCCGGCCGGGCCGCCGCCGGTAACGAATGCC TTTATGAAGCCACGCAAGACAGCGACGAAGCCGCCACGGGAGTGGGTGCCAGTGAACCTG CAGGTGCCCGAGGAAGACCCAGAGGACGAGTTCGACATTGGCACCGCGCAGAAGCCCGTG TACGAGAGCCCGGAAACCCCGGCGGCTACCGGTGGTGCTGCGGCGCCGAAGGTGCGGTTC GTGAACGGCGAGCCCGACATCACGGGTGAGGTGACGAACTGCTTCGAGGAGCCCGGGCTG CTCTACCGCATCGTCGATCGACCGAACAAGACGTGGGCCTTCTACAACGACAGCCGTTCC TTCGAGGTGCACGTGGTGTGCACGTTTGGGAAGCACAGCAAGATCACGCCGCTCGAAAAC ACGAAGATGACGCGTGATGAAAACACGGGCGAGTACGTGATGGAGTTGACCGTCTACCCT GGCGAGACGGAGCCCTTCATCAAGGGCTTCGTGAACGGCTTCGCGAGCAAGCTGAGCGCG CTGCCGCTGTCGCAGGAGTACTTCCAAGCTCGCAGCGAGGCACAGAATCAGCAGGTTGTG CAGGTGGAGATGGACGCCATCCGCGCCATCGCCGGCGACGAGACGGATGCGGAGCGCGTT CTGCAGATCTGCCTGGAGAACGGCCTGCCCTTTGTGGACCTCTCCTTTCCGCCTGTGCAG TCCTCCATCGAGTCTGGGGCGGCGAAGCCGTTCAAGCGGCTGCCGTGGGGCCGGCCGCGC ATGTACGTGAAGCCGGAGCTGCACGACCAAATTCGACTCTTCCGCAACCGCATCTGTCCC GGCGAGGTCGAGCAGGGCGAGCTGGGCGACTGCTGGCTCATGTGCGCGGTGGCCACGCTG GCCGAGGATCCGACAGTGGTCATGCAGGTGTTCCGGCACCCGAAGGGCGCCGATTCGGCG CGGTGCGAGCGCGCTATCGGTGCGTACCGCGTGTCCTTCAACAAGAACGGTCTCTGGCGC AGCATCCTTGTGGATGACTACTTTCCTGTCATCGCCGGCGCGCCGGCCTTCGCGCACAGC CGCGACCTGTGCGAGCTGTGGCCGGCAGTTCTCGAGAAGGCGTTCGCCAAGATGCACGGC AGCTACGCTATGATCCAGTCCGGTGACCCGATGCACGCACTGACAGACATGACGGGTTTC CCGGCCATGCGCATCGATGAGATGGTCTCCAAGGCGACCGTGCACAGCGGCCGCGACCTG GAGTCGCGCATGATTCAGTGGCAAAGGAAGGGCTACCAGGCCATCCTCACGACGCCCGGC AAGGCGCCGGCGATCCCGGCGGAGGCGCAGAGCTCGCCGGACTTCTCCGACCAGCCCGAG ATGGAGGAGGCGTTCGCCGGTACCGGCTTCCTGCCTGGCCACGCCTACTCCGTGCTGGAC GTGAAGGAGTTCCAAAAGGGACAGATCCGCCTGATATGCCTGCGCAACCCGTGGGTGCAC GGCAGCGGCTGGACGAGGGCGTGGGCGTGGGATGCCCTGGAGTGGCAGCAGCACCGCGAT ATCGCCACCGCGTGCGGCTTCAGCAAGCACAAGGGCGACACTAGCATCGTCTGGATGACC TTCGAGGATGCGCTCAAGTACTTCATCGGCGGTGGTGTGCTTTTCTGCGCGCGGGCAGCG CACGACGCGCGCGTGCCCATTACCTTCGCCGACTGCAAACCTGGCGCCGTCTTTCAGGTG TCGGTGAAGGCGCCCATGGACGTCACGTTCATCTTGTCGAACATGGACCACCGCGGCATG CACGTCGACGAGGCGGGTGCGGCCGAGTCTGACCCGAACAACATGGACTACCCGGCTGTG ATGCTGTCGCTTGCCGCGCCGGTGCCCAAAGAGACGGACGTGTACCAGGTCGTGCAGAAC TCCTCGACTGACATGACGCAGCCGTCGGACAACGCGTGGCTGTTCCTGCAGGCGCGCGAG ATTGCCATGACGTGCCACCTGGAGCCGAGTACCGCGCCGTACCTGCTCATTCCGCGCCTC ATGGAGGGCGACGAGACGGTCGGCAACGGCAACGGCGGAGGCGAGGACATGCGCGATTTT GTGCACCCGATCTACTACGTCAACGACTACGCCCACCTGTCCCGGAGCGCGTCAAGCGTG AAAGCGAAGGAGATTGCCGTGACCATCGGTTTCGAGGCGGATGGGGAGATCGGTGATAAC GTCATCGTGGCCATGTGCAAGATAGGCGAGGGCAACGCCGTCTTTGAGAACTTCCCGAAG TTCCCGACGGACGACGTGGAGCCGCACGAGGAGGAGATGTACTTCCAGACCAAGGAGAGC AACTGCGGCTATGCGCAGGAGAAGGCCGGCACGGCCATCTGCTGA
  • Download Fasta

  • Fasta :-

    MSYPPTEVDVISNDSLFSDSVEFDAAEKPIAAEDVHGVADPNDQPLGHDDRGLPTDDAVM RAGSGYPEEEPAGPPPVTNAFMKPRKTATKPPREWVPVNLQVPEEDPEDEFDIGTAQKPV YESPETPAATGGAAAPKVRFVNGEPDITGEVTNCFEEPGLLYRIVDRPNKTWAFYNDSRS FEVHVVCTFGKHSKITPLENTKMTRDENTGEYVMELTVYPGETEPFIKGFVNGFASKLSA LPLSQEYFQARSEAQNQQVVQVEMDAIRAIAGDETDAERVLQICLENGLPFVDLSFPPVQ SSIESGAAKPFKRLPWGRPRMYVKPELHDQIRLFRNRICPGEVEQGELGDCWLMCAVATL AEDPTVVMQVFRHPKGADSARCERAIGAYRVSFNKNGLWRSILVDDYFPVIAGAPAFAHS RDLCELWPAVLEKAFAKMHGSYAMIQSGDPMHALTDMTGFPAMRIDEMVSKATVHSGRDL ESRMIQWQRKGYQAILTTPGKAPAIPAEAQSSPDFSDQPEMEEAFAGTGFLPGHAYSVLD VKEFQKGQIRLICLRNPWVHGSGWTRAWAWDALEWQQHRDIATACGFSKHKGDTSIVWMT FEDALKYFIGGGVLFCARAAHDARVPITFADCKPGAVFQVSVKAPMDVTFILSNMDHRGM HVDEAGAAESDPNNMDYPAVMLSLAAPVPKETDVYQVVQNSSTDMTQPSDNAWLFLQARE IAMTCHLEPSTAPYLLIPRLMEGDETVGNGNGGGEDMRDFVHPIYYVNDYAHLSRSASSV KAKEIAVTIGFEADGEIGDNVIVAMCKIGEGNAVFENFPKFPTDDVEPHEEEMYFQTKES NCGYAQEKAGTAIC

  • title: catalytic site
  • coordinates: C351,H534,N556
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.04.0450476 SATVHSGRDL0.997unspLmjF.04.0450476 SATVHSGRDL0.997unspLmjF.04.0450476 SATVHSGRDL0.997unspLmjF.04.0450779 SRSASSVKAK0.997unspLmjF.04.0450123 SPVYESPETP0.99unspLmjF.04.0450379 SKGADSARCE0.992unsp

LmjF.04.0450      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India