LmjF.05.0950 | glutaminyl cyclase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.05.0950OTHER0.9741680.0082350.017597
No Results

  • Fasta :-

    >LmjF.05.0950 MQHQSLAARRRGRRLARRGESAFWCSLLKRCLPCLPLRWKSVHATSRTRRILMGILLCLI TTLIFLIGLLVCLTWKSNRSNTPLEPAAVQSTHAPRVPPEVGVHDPWAEDPVDVAVIRQR EEAVVRKWKENGFRPTYWEVERRTLPRLTKRALESWFEHGRRAAASATAVDVAEDVLTAH AWDAVDGGDADADLFDSLAFLYPPAQQRQHYRAAMDAILRHGPRVGGTKRDALLHHLVDE GLGRRRYDAARHAYHPAPPHLSPRGKELLEKAAASWPDAPHLAAAPQDDVAGREPGWRWS LSWDNFTADIPIRIDGSSRVEMQNLVFQFPGGLQFRRKQAAAASAAATGAKDALDEFVGG VPNRRRTRADDRKDVLEAEYHPADMTGETVYTQENFLQWAQDGVPFNPRPALVRGVPGTR VVLSPDAKGARVPLKPSLSAPAAEPATQQPVKHAVLAAHWDSKYFADIPFLAACDSAMPV VFLLRTIKNIAVLTDVAEALTESYKAERSGVVGGDASAAVPGLTSTFRNATTEAEVRERL ASLLSPAHHALLYQYFFARPYSIGGEQQNFVAAGIRNHPTKVEVDVRTWLDWVQHLPIIS VILFDGEEAYKHWSGDDNTYGSRHLAQRWRSTPSVMRSRHTDGPQSLYDSVDLFALYDLM GPAGTTFRNMYPTQSGIFYAGLSQREWELRHRAMQHSSAISAELLWRYDEATALPPAEAR EKADPFLRLLGPSPHEAVASLNAAYTRRLLANNASRPSVASLPRSWLMYGSPHEMLTLHS VARTTHDVRFVENFDQLRVYDRLDREIAAESSFDAERYLNTINHNIFFSPSQQEDLRRNR DVFVADDDHKHWLDTQRVLHLIPIPFPKSWHTANDNGSNVHDGTSTDLAGLLWSTVLELG DYWTRKE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/275 Sequence name : 275 Sequence length : 907 VALUES OF COMPUTED PARAMETERS Coef20 : 4.757 CoefTot : 0.962 ChDiff : 0 ZoneTo : 99 KR : 17 DE : 2 CleavSite : 98 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.635 3.076 0.708 0.957 MesoH : -0.191 0.647 -0.194 0.276 MuHd_075 : 37.493 21.112 8.909 8.564 MuHd_095 : 48.986 23.767 10.734 12.294 MuHd_100 : 48.888 23.073 11.251 11.770 MuHd_105 : 47.676 22.384 12.238 10.057 Hmax_075 : -13.600 17.000 3.826 -1.410 Hmax_095 : 4.725 5.862 -0.456 3.999 Hmax_100 : 13.500 11.200 2.171 4.800 Hmax_105 : 12.300 15.867 3.380 4.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0716 0.9284 DFMC : 0.0125 0.9875 This protein is probably imported in mitochondria. f(Ser) = 0.0808 f(Arg) = 0.1414 CMi = 0.30155 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 907 LmjF.05.0950 MQHQSLAARRRGRRLARRGESAFWCSLLKRCLPCLPLRWKSVHATSRTRRILMGILLCLITTLIFLIGLLVCLTWKSNRS 80 NTPLEPAAVQSTHAPRVPPEVGVHDPWAEDPVDVAVIRQREEAVVRKWKENGFRPTYWEVERRTLPRLTKRALESWFEHG 160 RRAAASATAVDVAEDVLTAHAWDAVDGGDADADLFDSLAFLYPPAQQRQHYRAAMDAILRHGPRVGGTKRDALLHHLVDE 240 GLGRRRYDAARHAYHPAPPHLSPRGKELLEKAAASWPDAPHLAAAPQDDVAGREPGWRWSLSWDNFTADIPIRIDGSSRV 320 EMQNLVFQFPGGLQFRRKQAAAASAAATGAKDALDEFVGGVPNRRRTRADDRKDVLEAEYHPADMTGETVYTQENFLQWA 400 QDGVPFNPRPALVRGVPGTRVVLSPDAKGARVPLKPSLSAPAAEPATQQPVKHAVLAAHWDSKYFADIPFLAACDSAMPV 480 VFLLRTIKNIAVLTDVAEALTESYKAERSGVVGGDASAAVPGLTSTFRNATTEAEVRERLASLLSPAHHALLYQYFFARP 560 YSIGGEQQNFVAAGIRNHPTKVEVDVRTWLDWVQHLPIISVILFDGEEAYKHWSGDDNTYGSRHLAQRWRSTPSVMRSRH 640 TDGPQSLYDSVDLFALYDLMGPAGTTFRNMYPTQSGIFYAGLSQREWELRHRAMQHSSAISAELLWRYDEATALPPAEAR 720 EKADPFLRLLGPSPHEAVASLNAAYTRRLLANNASRPSVASLPRSWLMYGSPHEMLTLHSVARTTHDVRFVENFDQLRVY 800 DRLDREIAAESSFDAERYLNTINHNIFFSPSQQEDLRRNRDVFVADDDHKHWLDTQRVLHLIPIPFPKSWHTANDNGSNV 880 HDGTSTDLAGLLWSTVLELGDYWTRKE 960 .............P...................................P.............................. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ........................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ LmjF.05.0950 9 HQSLAAR|RR 0.097 . LmjF.05.0950 10 QSLAARR|RG 0.091 . LmjF.05.0950 11 SLAARRR|GR 0.174 . LmjF.05.0950 13 AARRRGR|RL 0.237 . LmjF.05.0950 14 ARRRGRR|LA 0.673 *ProP* LmjF.05.0950 17 RGRRLAR|RG 0.286 . LmjF.05.0950 18 GRRLARR|GE 0.196 . LmjF.05.0950 29 FWCSLLK|RC 0.056 . LmjF.05.0950 30 WCSLLKR|CL 0.146 . LmjF.05.0950 38 LPCLPLR|WK 0.091 . LmjF.05.0950 40 CLPLRWK|SV 0.100 . LmjF.05.0950 47 SVHATSR|TR 0.090 . LmjF.05.0950 49 HATSRTR|RI 0.074 . LmjF.05.0950 50 ATSRTRR|IL 0.671 *ProP* LmjF.05.0950 76 LVCLTWK|SN 0.072 . LmjF.05.0950 79 LTWKSNR|SN 0.188 . LmjF.05.0950 96 QSTHAPR|VP 0.084 . LmjF.05.0950 118 VDVAVIR|QR 0.089 . LmjF.05.0950 120 VAVIRQR|EE 0.086 . LmjF.05.0950 126 REEAVVR|KW 0.086 . LmjF.05.0950 127 EEAVVRK|WK 0.118 . LmjF.05.0950 129 AVVRKWK|EN 0.140 . LmjF.05.0950 134 WKENGFR|PT 0.093 . LmjF.05.0950 142 TYWEVER|RT 0.078 . LmjF.05.0950 143 YWEVERR|TL 0.112 . LmjF.05.0950 147 ERRTLPR|LT 0.133 . LmjF.05.0950 150 TLPRLTK|RA 0.124 . LmjF.05.0950 151 LPRLTKR|AL 0.271 . LmjF.05.0950 161 SWFEHGR|RA 0.099 . LmjF.05.0950 162 WFEHGRR|AA 0.131 . LmjF.05.0950 208 YPPAQQR|QH 0.086 . LmjF.05.0950 212 QQRQHYR|AA 0.206 . LmjF.05.0950 220 AMDAILR|HG 0.075 . LmjF.05.0950 224 ILRHGPR|VG 0.121 . LmjF.05.0950 229 PRVGGTK|RD 0.057 . LmjF.05.0950 230 RVGGTKR|DA 0.192 . LmjF.05.0950 244 VDEGLGR|RR 0.081 . LmjF.05.0950 245 DEGLGRR|RY 0.117 . LmjF.05.0950 246 EGLGRRR|YD 0.097 . LmjF.05.0950 251 RRYDAAR|HA 0.121 . LmjF.05.0950 264 PPHLSPR|GK 0.156 . LmjF.05.0950 266 HLSPRGK|EL 0.079 . LmjF.05.0950 271 GKELLEK|AA 0.069 . LmjF.05.0950 293 QDDVAGR|EP 0.086 . LmjF.05.0950 298 GREPGWR|WS 0.083 . LmjF.05.0950 313 TADIPIR|ID 0.110 . LmjF.05.0950 319 RIDGSSR|VE 0.081 . LmjF.05.0950 336 PGGLQFR|RK 0.085 . LmjF.05.0950 337 GGLQFRR|KQ 0.112 . LmjF.05.0950 338 GLQFRRK|QA 0.121 . LmjF.05.0950 351 AAATGAK|DA 0.096 . LmjF.05.0950 364 VGGVPNR|RR 0.080 . LmjF.05.0950 365 GGVPNRR|RT 0.099 . LmjF.05.0950 366 GVPNRRR|TR 0.111 . LmjF.05.0950 368 PNRRRTR|AD 0.304 . LmjF.05.0950 372 RTRADDR|KD 0.071 . LmjF.05.0950 373 TRADDRK|DV 0.235 . LmjF.05.0950 409 GVPFNPR|PA 0.082 . LmjF.05.0950 414 PRPALVR|GV 0.119 . LmjF.05.0950 420 RGVPGTR|VV 0.069 . LmjF.05.0950 428 VLSPDAK|GA 0.080 . LmjF.05.0950 431 PDAKGAR|VP 0.070 . LmjF.05.0950 435 GARVPLK|PS 0.073 . LmjF.05.0950 452 ATQQPVK|HA 0.072 . LmjF.05.0950 463 AAHWDSK|YF 0.079 . LmjF.05.0950 485 PVVFLLR|TI 0.074 . LmjF.05.0950 488 FLLRTIK|NI 0.096 . LmjF.05.0950 505 ALTESYK|AE 0.063 . LmjF.05.0950 508 ESYKAER|SG 0.121 . LmjF.05.0950 528 GLTSTFR|NA 0.095 . LmjF.05.0950 537 TTEAEVR|ER 0.080 . LmjF.05.0950 539 EAEVRER|LA 0.087 . LmjF.05.0950 559 YQYFFAR|PY 0.150 . LmjF.05.0950 576 FVAAGIR|NH 0.069 . LmjF.05.0950 581 IRNHPTK|VE 0.090 . LmjF.05.0950 587 KVEVDVR|TW 0.087 . LmjF.05.0950 611 DGEEAYK|HW 0.065 . LmjF.05.0950 623 DNTYGSR|HL 0.075 . LmjF.05.0950 628 SRHLAQR|WR 0.103 . LmjF.05.0950 630 HLAQRWR|ST 0.162 . LmjF.05.0950 637 STPSVMR|SR 0.136 . LmjF.05.0950 639 PSVMRSR|HT 0.099 . LmjF.05.0950 668 PAGTTFR|NM 0.089 . LmjF.05.0950 685 YAGLSQR|EW 0.090 . LmjF.05.0950 690 QREWELR|HR 0.093 . LmjF.05.0950 692 EWELRHR|AM 0.075 . LmjF.05.0950 707 SAELLWR|YD 0.085 . LmjF.05.0950 720 LPPAEAR|EK 0.083 . LmjF.05.0950 722 PAEAREK|AD 0.055 . LmjF.05.0950 728 KADPFLR|LL 0.109 . LmjF.05.0950 747 LNAAYTR|RL 0.087 . LmjF.05.0950 748 NAAYTRR|LL 0.116 . LmjF.05.0950 756 LANNASR|PS 0.100 . LmjF.05.0950 764 SVASLPR|SW 0.144 . LmjF.05.0950 783 TLHSVAR|TT 0.189 . LmjF.05.0950 789 RTTHDVR|FV 0.108 . LmjF.05.0950 798 ENFDQLR|VY 0.076 . LmjF.05.0950 802 QLRVYDR|LD 0.086 . LmjF.05.0950 805 VYDRLDR|EI 0.135 . LmjF.05.0950 817 SSFDAER|YL 0.116 . LmjF.05.0950 837 SQQEDLR|RN 0.096 . LmjF.05.0950 838 QQEDLRR|NR 0.110 . LmjF.05.0950 840 EDLRRNR|DV 0.431 . LmjF.05.0950 850 VADDDHK|HW 0.061 . LmjF.05.0950 857 HWLDTQR|VL 0.083 . LmjF.05.0950 868 IPIPFPK|SW 0.143 . LmjF.05.0950 905 LGDYWTR|KE 0.071 . LmjF.05.0950 906 GDYWTRK|E- 0.097 . ____________________________^_________________

  • Fasta :-

    >LmjF.05.0950 ATGCAACATCAATCTCTGGCGGCTCGGCGGCGGGGCCGCAGGCTGGCCCGCAGGGGCGAA TCTGCGTTTTGGTGCAGCCTGCTGAAGCGGTGCCTACCCTGTCTTCCCCTGCGATGGAAG AGCGTTCACGCGACGAGCCGCACGAGGCGCATCCTCATGGGCATCCTGCTCTGTCTCATC ACCACCCTCATCTTCCTCATCGGTCTTCTGGTGTGTCTCACCTGGAAGAGCAACCGCAGC AACACCCCACTCGAGCCTGCCGCGGTGCAGTCGACGCACGCGCCTCGGGTGCCACCAGAG GTGGGTGTGCACGACCCTTGGGCCGAAGACCCCGTCGACGTCGCCGTTATCCGGCAGCGG GAGGAAGCGGTGGTTCGGAAGTGGAAAGAGAACGGCTTCCGCCCTACCTACTGGGAGGTC GAGCGCCGCACCCTACCGCGACTAACGAAGAGGGCCTTGGAGTCGTGGTTTGAGCACGGC AGGCGCGCGGCGGCGTCGGCCACGGCGGTGGATGTTGCAGAGGATGTACTGACGGCGCAT GCCTGGGACGCTGTCGACGGCGGCGACGCAGACGCTGACCTCTTCGACAGCCTCGCCTTT CTCTACCCACCAGCGCAGCAGAGGCAGCACTACCGCGCGGCGATGGACGCGATTCTGCGC CATGGCCCTCGAGTTGGAGGCACGAAGCGCGACGCCCTTCTCCATCACTTAGTCGATGAA GGACTCGGACGTCGACGGTACGACGCTGCACGGCACGCCTACCACCCAGCACCGCCACAC CTCAGCCCGCGTGGGAAGGAACTGCTGGAGAAAGCAGCCGCCTCGTGGCCAGATGCACCG CATCTGGCTGCCGCGCCGCAAGACGATGTTGCGGGCCGTGAACCGGGGTGGCGATGGTCT CTGAGCTGGGACAACTTCACGGCCGATATTCCAATACGCATCGATGGCAGCTCGCGTGTC GAGATGCAGAACCTCGTCTTTCAGTTCCCCGGTGGGTTGCAGTTCCGTCGCAAGCAGGCC GCAGCCGCATCAGCGGCAGCAACTGGCGCGAAGGATGCACTCGACGAGTTCGTCGGCGGC GTGCCAAACCGCCGGCGCACCCGCGCTGATGATCGCAAGGACGTACTCGAAGCTGAATAC CACCCGGCCGACATGACAGGAGAGACCGTCTACACACAGGAGAACTTCCTGCAGTGGGCA CAGGACGGCGTCCCGTTTAACCCTCGCCCTGCGCTGGTGCGCGGGGTGCCCGGCACGCGG GTCGTCCTGTCCCCGGATGCGAAGGGGGCGCGGGTGCCGCTGAAGCCGAGTCTGTCCGCG CCGGCCGCCGAACCGGCGACGCAACAGCCCGTGAAGCACGCCGTGCTTGCCGCGCACTGG GACTCGAAGTACTTCGCAGACATCCCCTTCCTCGCCGCCTGCGACTCCGCCATGCCGGTG GTGTTCCTCCTGCGGACCATCAAGAACATCGCCGTTTTGACGGATGTGGCGGAGGCGTTG ACGGAGTCGTACAAGGCTGAGCGGTCTGGCGTAGTGGGCGGCGACGCATCCGCCGCCGTT CCCGGGCTCACGAGCACGTTCCGCAACGCCACGACGGAGGCTGAAGTGAGAGAGCGGCTG GCGTCACTCCTCTCACCAGCCCATCATGCGCTCCTGTACCAGTACTTCTTCGCGCGCCCC TACAGCATCGGCGGTGAGCAGCAGAACTTTGTAGCGGCGGGTATACGAAACCATCCGACA AAGGTGGAGGTAGACGTGCGCACGTGGCTGGACTGGGTGCAGCACCTGCCCATCATCTCC GTCATCCTCTTCGACGGCGAGGAGGCGTACAAGCACTGGTCCGGGGACGACAACACGTAT GGGTCGCGGCACCTAGCGCAGCGGTGGCGCAGCACCCCCTCCGTGATGCGGTCGCGCCAC ACTGACGGCCCGCAGTCCCTCTACGACTCGGTCGACCTCTTCGCTCTCTACGACCTCATG GGCCCGGCAGGGACGACGTTCAGGAATATGTACCCGACGCAGAGCGGCATCTTCTACGCG GGGCTATCGCAGCGCGAGTGGGAGCTTCGCCATCGAGCAATGCAGCACAGCTCGGCAATC TCCGCGGAGCTCCTGTGGCGGTACGACGAGGCCACCGCATTGCCGCCGGCGGAGGCGCGC GAGAAGGCAGACCCCTTTCTCCGCCTCCTCGGCCCCTCACCACATGAAGCAGTCGCATCC CTCAACGCTGCCTACACGCGACGCCTGCTGGCAAACAACGCATCGCGCCCGTCAGTGGCG TCACTCCCGCGGTCGTGGCTGATGTACGGTTCGCCGCACGAGATGCTCACGCTGCATAGC GTCGCTCGCACCACCCACGATGTCAGGTTCGTGGAAAACTTTGATCAGCTGCGGGTATAC GACCGGCTGGACCGGGAGATTGCCGCCGAGAGCAGCTTCGATGCGGAACGTTACCTGAAC ACCATCAACCACAACATCTTCTTCTCTCCTTCTCAACAGGAGGACCTGCGCCGCAACCGA GACGTCTTCGTCGCTGATGATGACCACAAGCACTGGCTGGACACGCAGCGGGTGCTGCAT CTTATTCCCATCCCGTTCCCCAAGTCATGGCACACGGCGAACGACAACGGCAGCAACGTG CACGATGGAACGTCGACGGACCTGGCAGGGCTGTTATGGTCTACGGTACTAGAGCTGGGC GACTACTGGACGCGTAAAGAATGA
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  • Fasta :-

    MQHQSLAARRRGRRLARRGESAFWCSLLKRCLPCLPLRWKSVHATSRTRRILMGILLCLI TTLIFLIGLLVCLTWKSNRSNTPLEPAAVQSTHAPRVPPEVGVHDPWAEDPVDVAVIRQR EEAVVRKWKENGFRPTYWEVERRTLPRLTKRALESWFEHGRRAAASATAVDVAEDVLTAH AWDAVDGGDADADLFDSLAFLYPPAQQRQHYRAAMDAILRHGPRVGGTKRDALLHHLVDE GLGRRRYDAARHAYHPAPPHLSPRGKELLEKAAASWPDAPHLAAAPQDDVAGREPGWRWS LSWDNFTADIPIRIDGSSRVEMQNLVFQFPGGLQFRRKQAAAASAAATGAKDALDEFVGG VPNRRRTRADDRKDVLEAEYHPADMTGETVYTQENFLQWAQDGVPFNPRPALVRGVPGTR VVLSPDAKGARVPLKPSLSAPAAEPATQQPVKHAVLAAHWDSKYFADIPFLAACDSAMPV VFLLRTIKNIAVLTDVAEALTESYKAERSGVVGGDASAAVPGLTSTFRNATTEAEVRERL ASLLSPAHHALLYQYFFARPYSIGGEQQNFVAAGIRNHPTKVEVDVRTWLDWVQHLPIIS VILFDGEEAYKHWSGDDNTYGSRHLAQRWRSTPSVMRSRHTDGPQSLYDSVDLFALYDLM GPAGTTFRNMYPTQSGIFYAGLSQREWELRHRAMQHSSAISAELLWRYDEATALPPAEAR EKADPFLRLLGPSPHEAVASLNAAYTRRLLANNASRPSVASLPRSWLMYGSPHEMLTLHS VARTTHDVRFVENFDQLRVYDRLDREIAAESSFDAERYLNTINHNIFFSPSQQEDLRRNR DVFVADDDHKHWLDTQRVLHLIPIPFPKSWHTANDNGSNVHDGTSTDLAGLLWSTVLELG DYWTRKE

  • title: metal binding site
  • coordinates: H459,D475,E607,E608,D658,H871
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.05.0950683 SYAGLSQREW0.993unspLmjF.05.0950683 SYAGLSQREW0.993unspLmjF.05.0950683 SYAGLSQREW0.993unspLmjF.05.0950733 SLLGPSPHEA0.996unspLmjF.05.0950275 SKAAASWPDA0.996unspLmjF.05.0950646 SDGPQSLYDS0.997unsp

LmjF.05.0950      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India