LmjF.05.0960 | metallo-peptidase, Clan M-, Family M49

  • Computed_GO_Component_IDs:  GO:0005737      

  • Computed_GO_Components:  cytoplasm      

  • Computed_GO_Function_IDs:  GO:0008239      

  • Computed_GO_Functions:  dipeptidyl-peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmjF.05.0960OTHER0.9328720.0411690.025959
No Results

  • Fasta :-

    >LmjF.05.0960 MSHNTLYITPRAVPYCILSIANAFKDLTPKQRHYAHHMMAAGWCGAPVVAEQLSPESLPL LRLFFKVLSAQPLDTFKANSVNAGVDPDEVDQFLEYFAMVYSNMGNYISFGDTKFVPSIP KERFAKIVASADGSPAVDAQLLDAIYNLDDDKLTLDFPPKGLTRYYSPNVTREDAAVAND FLASKKMDGVNTRVFKEEDGSLVIRVAAATERTVPAEKFNGRTIAIYYGDYKEEMARVVA ELRKAQPYAENETEVRMLNHYIEHFQYGDVEAHKESQKEWVRDVGPTVETNIGFIESYRD PSGVRAEWEGFVAVVNKEQSKMYGALVAQGEKFIAQLPWGKAFEKDVFSSPDFTSLDVLG FASSGIPAGINIPNYDDIRQTVGFKNVYLSNVVSAMTFKDKLNYITEADWELYKASILAA TSVNVGIHELLGHGTGKLLSENSDGTFNFDEKTVDPLSGKPVATWYKPGDTYSSVFGGLG SSYEECRAEAVSLYLCLLPELLEIFNIQTAKEQQDVIYVCWLNMVRAGLVGLEFYTPEKQ QWRQAHMRARFCILQALARAPNPIVQITENAKEGVLITLDRERIATDGRQAIGDLLVNLN VNKATADAKRGSAYFENMTVVSDQYVHYRDIIMARRKPRKQYVQPHTFISGDTVEVLEFA GSVEGVVESFVTRHREIPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/836 Sequence name : 836 Sequence length : 679 VALUES OF COMPUTED PARAMETERS Coef20 : 4.150 CoefTot : -1.838 ChDiff : -19 ZoneTo : 50 KR : 4 DE : 1 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.641 0.148 0.584 MesoH : -0.399 0.345 -0.315 0.247 MuHd_075 : 29.921 20.205 9.381 5.715 MuHd_095 : 38.799 28.230 11.797 8.018 MuHd_100 : 41.942 30.450 12.584 9.414 MuHd_105 : 32.806 26.785 10.524 8.183 Hmax_075 : 12.300 15.100 3.917 5.160 Hmax_095 : 17.587 24.100 5.786 7.110 Hmax_100 : 18.900 24.100 5.786 7.110 Hmax_105 : 16.363 25.200 6.252 6.326 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8003 0.1997 DFMC : 0.8576 0.1424
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 679 LmjF.05.0960 MSHNTLYITPRAVPYCILSIANAFKDLTPKQRHYAHHMMAAGWCGAPVVAEQLSPESLPLLRLFFKVLSAQPLDTFKANS 80 VNAGVDPDEVDQFLEYFAMVYSNMGNYISFGDTKFVPSIPKERFAKIVASADGSPAVDAQLLDAIYNLDDDKLTLDFPPK 160 GLTRYYSPNVTREDAAVANDFLASKKMDGVNTRVFKEEDGSLVIRVAAATERTVPAEKFNGRTIAIYYGDYKEEMARVVA 240 ELRKAQPYAENETEVRMLNHYIEHFQYGDVEAHKESQKEWVRDVGPTVETNIGFIESYRDPSGVRAEWEGFVAVVNKEQS 320 KMYGALVAQGEKFIAQLPWGKAFEKDVFSSPDFTSLDVLGFASSGIPAGINIPNYDDIRQTVGFKNVYLSNVVSAMTFKD 400 KLNYITEADWELYKASILAATSVNVGIHELLGHGTGKLLSENSDGTFNFDEKTVDPLSGKPVATWYKPGDTYSSVFGGLG 480 SSYEECRAEAVSLYLCLLPELLEIFNIQTAKEQQDVIYVCWLNMVRAGLVGLEFYTPEKQQWRQAHMRARFCILQALARA 560 PNPIVQITENAKEGVLITLDRERIATDGRQAIGDLLVNLNVNKATADAKRGSAYFENMTVVSDQYVHYRDIIMARRKPRK 640 QYVQPHTFISGDTVEVLEFAGSVEGVVESFVTRHREIPL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ....................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmjF.05.0960 11 TLYITPR|AV 0.143 . LmjF.05.0960 25 SIANAFK|DL 0.101 . LmjF.05.0960 30 FKDLTPK|QR 0.066 . LmjF.05.0960 32 DLTPKQR|HY 0.100 . LmjF.05.0960 62 ESLPLLR|LF 0.087 . LmjF.05.0960 66 LLRLFFK|VL 0.076 . LmjF.05.0960 77 QPLDTFK|AN 0.064 . LmjF.05.0960 114 ISFGDTK|FV 0.080 . LmjF.05.0960 121 FVPSIPK|ER 0.059 . LmjF.05.0960 123 PSIPKER|FA 0.128 . LmjF.05.0960 126 PKERFAK|IV 0.221 . LmjF.05.0960 152 YNLDDDK|LT 0.057 . LmjF.05.0960 160 TLDFPPK|GL 0.068 . LmjF.05.0960 164 PPKGLTR|YY 0.114 . LmjF.05.0960 172 YSPNVTR|ED 0.094 . LmjF.05.0960 185 NDFLASK|KM 0.060 . LmjF.05.0960 186 DFLASKK|MD 0.103 . LmjF.05.0960 193 MDGVNTR|VF 0.091 . LmjF.05.0960 196 VNTRVFK|EE 0.148 . LmjF.05.0960 205 DGSLVIR|VA 0.128 . LmjF.05.0960 212 VAAATER|TV 0.113 . LmjF.05.0960 218 RTVPAEK|FN 0.069 . LmjF.05.0960 222 AEKFNGR|TI 0.094 . LmjF.05.0960 232 IYYGDYK|EE 0.057 . LmjF.05.0960 237 YKEEMAR|VV 0.105 . LmjF.05.0960 243 RVVAELR|KA 0.084 . LmjF.05.0960 244 VVAELRK|AQ 0.079 . LmjF.05.0960 256 ENETEVR|ML 0.105 . LmjF.05.0960 274 GDVEAHK|ES 0.061 . LmjF.05.0960 278 AHKESQK|EW 0.059 . LmjF.05.0960 282 SQKEWVR|DV 0.188 . LmjF.05.0960 299 GFIESYR|DP 0.121 . LmjF.05.0960 305 RDPSGVR|AE 0.083 . LmjF.05.0960 317 FVAVVNK|EQ 0.074 . LmjF.05.0960 321 VNKEQSK|MY 0.082 . LmjF.05.0960 332 LVAQGEK|FI 0.064 . LmjF.05.0960 341 AQLPWGK|AF 0.064 . LmjF.05.0960 345 WGKAFEK|DV 0.092 . LmjF.05.0960 379 PNYDDIR|QT 0.077 . LmjF.05.0960 385 RQTVGFK|NV 0.066 . LmjF.05.0960 399 VSAMTFK|DK 0.070 . LmjF.05.0960 401 AMTFKDK|LN 0.067 . LmjF.05.0960 414 ADWELYK|AS 0.060 . LmjF.05.0960 437 LGHGTGK|LL 0.073 . LmjF.05.0960 452 TFNFDEK|TV 0.074 . LmjF.05.0960 460 VDPLSGK|PV 0.068 . LmjF.05.0960 467 PVATWYK|PG 0.063 . LmjF.05.0960 487 SSYEECR|AE 0.087 . LmjF.05.0960 511 FNIQTAK|EQ 0.068 . LmjF.05.0960 526 CWLNMVR|AG 0.070 . LmjF.05.0960 539 EFYTPEK|QQ 0.061 . LmjF.05.0960 543 PEKQQWR|QA 0.099 . LmjF.05.0960 548 WRQAHMR|AR 0.142 . LmjF.05.0960 550 QAHMRAR|FC 0.127 . LmjF.05.0960 559 ILQALAR|AP 0.095 . LmjF.05.0960 572 QITENAK|EG 0.055 . LmjF.05.0960 581 VLITLDR|ER 0.072 . LmjF.05.0960 583 ITLDRER|IA 0.114 . LmjF.05.0960 589 RIATDGR|QA 0.098 . LmjF.05.0960 603 VNLNVNK|AT 0.069 . LmjF.05.0960 609 KATADAK|RG 0.070 . LmjF.05.0960 610 ATADAKR|GS 0.218 . LmjF.05.0960 629 DQYVHYR|DI 0.148 . LmjF.05.0960 635 RDIIMAR|RK 0.086 . LmjF.05.0960 636 DIIMARR|KP 0.118 . LmjF.05.0960 637 IIMARRK|PR 0.078 . LmjF.05.0960 639 MARRKPR|KQ 0.432 . LmjF.05.0960 640 ARRKPRK|QY 0.107 . LmjF.05.0960 673 VESFVTR|HR 0.102 . LmjF.05.0960 675 SFVTRHR|EI 0.077 . ____________________________^_________________

  • Fasta :-

    >LmjF.05.0960 ATGTCGCACAACACGCTTTACATTACCCCTCGCGCGGTACCTTATTGCATCCTATCCATC GCCAACGCCTTCAAGGACCTGACCCCGAAGCAACGCCACTACGCCCATCACATGATGGCG GCGGGTTGGTGCGGCGCCCCGGTGGTGGCCGAGCAGCTGAGCCCCGAGTCTCTGCCGCTC CTGCGTCTCTTCTTCAAGGTGCTCAGTGCGCAGCCGCTGGACACCTTCAAGGCGAACAGC GTCAACGCCGGCGTCGACCCCGATGAGGTGGACCAGTTCCTGGAATACTTCGCGATGGTC TACTCGAACATGGGCAACTACATCTCCTTCGGCGACACCAAGTTTGTCCCATCGATTCCG AAGGAGCGCTTTGCGAAGATCGTGGCGAGCGCGGACGGGTCTCCGGCGGTGGATGCGCAG CTGCTGGACGCCATCTACAACCTGGACGACGACAAGCTGACGCTGGACTTCCCTCCCAAA GGGCTTACGCGGTACTACAGCCCCAACGTCACCCGCGAAGACGCCGCTGTCGCGAACGAC TTCCTGGCATCGAAGAAGATGGACGGCGTCAACACACGCGTGTTCAAGGAGGAAGACGGC TCCCTCGTCATCCGCGTCGCGGCGGCGACGGAGAGGACGGTGCCGGCGGAGAAGTTCAAC GGCCGCACCATTGCAATTTACTATGGCGACTACAAGGAGGAGATGGCCCGCGTCGTCGCA GAGCTGCGCAAGGCGCAGCCGTACGCGGAGAACGAGACGGAGGTGCGTATGTTGAACCAC TACATCGAGCACTTCCAGTATGGCGACGTGGAGGCGCACAAGGAGAGCCAGAAGGAGTGG GTGAGGGATGTGGGGCCGACGGTGGAGACGAACATTGGCTTCATCGAGTCGTACCGCGAC CCCTCCGGCGTGCGTGCGGAGTGGGAGGGCTTCGTGGCGGTGGTGAACAAGGAGCAGTCG AAGATGTACGGCGCACTGGTGGCACAGGGTGAGAAGTTCATTGCTCAGCTGCCGTGGGGC AAGGCGTTCGAGAAGGACGTCTTCTCCAGCCCGGACTTCACCAGCCTTGACGTCCTGGGC TTCGCGAGCAGTGGCATTCCGGCCGGCATCAACATCCCCAACTACGACGACATTCGCCAG ACCGTTGGCTTCAAGAACGTGTACCTGTCCAACGTGGTGAGCGCGATGACCTTCAAGGAC AAGCTCAACTACATCACAGAAGCGGACTGGGAGCTGTACAAGGCGAGCATTCTCGCCGCG ACCTCGGTGAACGTCGGCATCCACGAGCTGCTGGGCCACGGCACAGGCAAGCTGCTGTCG GAGAACAGCGACGGCACCTTCAACTTTGACGAGAAAACGGTGGACCCACTCAGTGGCAAG CCCGTCGCCACGTGGTACAAGCCCGGCGACACGTATTCGAGCGTGTTTGGCGGCCTTGGC AGCTCGTACGAGGAGTGCCGCGCTGAGGCGGTATCGCTGTACCTCTGCTTGCTGCCGGAG CTGCTGGAGATCTTCAACATCCAGACAGCGAAGGAGCAGCAGGACGTCATCTATGTCTGC TGGCTGAACATGGTGCGCGCCGGCCTGGTCGGGCTCGAGTTCTACACACCGGAGAAGCAG CAGTGGCGCCAGGCTCACATGCGGGCGCGTTTCTGCATTCTCCAGGCGCTGGCGCGTGCA CCGAACCCGATTGTGCAGATCACCGAGAACGCCAAGGAGGGCGTCCTCATCACACTCGAC CGCGAGCGCATCGCCACAGACGGGCGCCAGGCGATTGGGGACCTGCTGGTGAACCTCAAT GTCAACAAGGCGACGGCCGACGCGAAGCGCGGCAGCGCCTACTTCGAGAACATGACGGTC GTGAGCGACCAGTACGTGCACTACCGCGACATCATCATGGCGCGCCGCAAGCCGCGCAAG CAGTACGTCCAGCCGCACACCTTCATCAGCGGGGATACGGTGGAGGTGCTGGAGTTTGCC GGATCGGTAGAAGGGGTCGTGGAATCCTTCGTTACCCGACACCGCGAGATCCCGCTGTAG
  • Download Fasta

  • Fasta :-

    MSHNTLYITPRAVPYCILSIANAFKDLTPKQRHYAHHMMAAGWCGAPVVAEQLSPESLPL LRLFFKVLSAQPLDTFKANSVNAGVDPDEVDQFLEYFAMVYSNMGNYISFGDTKFVPSIP KERFAKIVASADGSPAVDAQLLDAIYNLDDDKLTLDFPPKGLTRYYSPNVTREDAAVAND FLASKKMDGVNTRVFKEEDGSLVIRVAAATERTVPAEKFNGRTIAIYYGDYKEEMARVVA ELRKAQPYAENETEVRMLNHYIEHFQYGDVEAHKESQKEWVRDVGPTVETNIGFIESYRD PSGVRAEWEGFVAVVNKEQSKMYGALVAQGEKFIAQLPWGKAFEKDVFSSPDFTSLDVLG FASSGIPAGINIPNYDDIRQTVGFKNVYLSNVVSAMTFKDKLNYITEADWELYKASILAA TSVNVGIHELLGHGTGKLLSENSDGTFNFDEKTVDPLSGKPVATWYKPGDTYSSVFGGLG SSYEECRAEAVSLYLCLLPELLEIFNIQTAKEQQDVIYVCWLNMVRAGLVGLEFYTPEKQ QWRQAHMRARFCILQALARAPNPIVQITENAKEGVLITLDRERIATDGRQAIGDLLVNLN VNKATADAKRGSAYFENMTVVSDQYVHYRDIIMARRKPRKQYVQPHTFISGDTVEVLEFA GSVEGVVESFVTRHREIPL

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmjF.05.0960302 SYRDPSGVRA0.996unspLmjF.05.0960302 SYRDPSGVRA0.996unspLmjF.05.0960302 SYRDPSGVRA0.996unspLmjF.05.0960276 SAHKESQKEW0.996unspLmjF.05.0960297 SGFIESYRDP0.992unsp

LmjF.05.0960      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India